Montipora foliosa: 138009883
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Entry
138009883 CDS
T10576
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138009883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
138009883
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138009883
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138009883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
NOT1_connector
DUF3819
CNOT1_HEAT
CNOT1_1st
GPAT_C
Motif
Other DBs
NCBI-GeneID:
138009883
NCBI-ProteinID:
XP_068712993
LinkDB
All DBs
Position
1:6168373..6216943
Genome browser
AA seq
2458 aa
AA seq
DB search
MSACVDSLSLALGQISFAVNDLTKKNYKATLKEIHELIEKHGYEAERHLFRCLFSFIDFT
GDGKNNGKDFLQCQFLIQECQMLVSKPNFSSILCFAIESPEHKQRTLRPSSQLLPNMSRV
LKLNKVQEVIFGLSLLSSSNEDLKSHAAQFVKHKLPDLLRSYIDADVGSVQEGGLTDVAI
EVLHRLLTHVVHGPREQVGVGDDQVTAFVETLKKDFPKERVPVVLAPLLYPELQDISPDN
LIPEPSIFSKSVMEDDLADLIHEIGYSSCASVDECKNTLIHFGVQDITPSSVARVIGMMV
KTVFGLGEHVTIQNYGSSSVSLDKLGLSELTPGPATWNVEVFVQTLKEMIPLLSWRQVIQ
EFDYPEFHVPSREGLQLLFTACHRGLMEIFPVDVLYRTWTNTDGQLSWIQQVLSNPDVFC
FADYPCHTVVIDLLKTAPEDDNRETATWKSLNLSETLLRLAEAGHYETVKSLFTFPLKHC
PDVLLLALLQINPLWHTLRNELVLQLIPVFLANHPNSGSVLHYVWHGQGQSASIRQLVMQ
AMAEWYSKGDMDQGRLSRILDVAQDLKALSMLLNGSPFVFVIDLAALASRREYLKLDKWL
KDKLKEHQEEFGQACVAFLRRRCPYLLGMSLDKELPKSVQLPQETVVTMLSCLQSFLGQA
SPELAETISQMLTNHGPLVKVRPSAAVVGIPFKRQGSLDGGQLQNVLAGQLDSLTGLNIP
TSSLPATPATPTSQLPSFPPHPLTGNALGPSGSVGAVGSIGSGLPSQAAVQKPPSQLGQL
PLSTPGATSSSGLQSPSFSSSQNPLLQQLHQAGGLAQSFGGSAIDNARLLAGLGIQKQLG
GSSLLQQQQQQTTLLSQSRNQADKLRTVSTADVSQVWPGMDQSFTKEVEDEANSYFQRIY
NHPPNPTISIDEVLEMLKKFKDSPVKKERDIFLCMLRNLFEEYRFFPQYPDKELHTTACL
FGGIIEQGLVTYMALGIALRYVLEALRKPFGSKMYMFGIAALDRFKTRLKDYPHYCQHLA
SIPHFMEFPHSLIEYIEYGQQSREPLLGGRNIQEPLTSRLLNRTTPTLTSAPGSSTFTST
AVSRSVPLGPSIPPGPSVPLPPSIPLVSTSTATSLSSTKSSSVSENASASSPVRSKEPSI
ATANNIDTLLGATETSEIVQPPESVQDKVHFIFNNISQTNLQQKAEELRNLIQSEYILWM
TQYLVMKRASIEPNYHQLYLEFMESVELTNLAREVLKETYRNIKVLLQSDKVPANFSDRS
LLKNLGHWLGLQTLARNKPILMKDLDLKSLIIEAYFKGQQEMLYVVPFVAKVIESSAKSK
VFKPPNPWVMAIMSVLVELHQMPDLKLNLKFEVEVLCNTLSLEMKELKASELLKDPERLK
HIPHQLSSPEKEKQSVVSNSSTPTPTGSAQQGQPPVAPPPPQYSYQEINVASLAGLAPHI
QINAQIPIFQQHPHLRQFVRPAIERAVQELVHPVVERSIKICLTTAEMIVKKDFALDPEE
SRMRAAAHHMVRFMTAGMALITCREPLLISINNNLRSNFLAALRGANQQQKDMIEQAASV
ISEDNTELACAFIQKTAVEKALPEMDKRLTTEFDLRRIARSEGRRYCDPVVLTYQAERMP
EQIRLKVGGVNANQTAVYEEFARSIPGFQPPSSGEAITTPPLPKPIGILGNAEAFMPEEV
VQILSKCAAEIEQHLHAIIAPPTNQHVATIHSLLETVVQARISRDNMAALRLLHKAVEGL
LEGVGTLGNDAELSLRYRDCHLIVLRGLQDPRGYGLMWTARHVTKFVCECPPELKFNVDA
IDILIRSHLLNMREFDLHLVQCIDNGHNIQALHFAIQLAKYVSDDKQSPHVTENDLYHTI
EALTRIAHSRQNSDGLSSFLESSHNGPLPSQPVGTHQEIGDNKAPGGPTSLTSGVSASGV
TGSFHVYEDPPGLHEKVEYLLREWVRLCHQPGAGKESEKAFSTFVALLHQQGILRTDDLI
TRFFRISTELCVEVTYRALGDHPNSPTTARAKCYNTLDAYCRLIALLVRHSGDASNNVTK
INLLSRVLGTVATVLFQDHEIRHTEFQQLPYHRTFIMLLVELNQPEPILEAINFQVLQTF
STVFHALRPSRAPGFAYAWLELISHRLLMSKLLLNTPQQKGWVLFQQLLIDLFKFLAPFL
RNAELAKQTHLLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPNCIQMRNLILSAFPRN
MRLPDPFTPNLKVDLLTDIAHSPRILTNFASAIQPASFKKDLDSYLKTRAPVTFLTELRS
HLQVSNEPGTRYNVPLMNALVLYVGTQAITYIHSKSGTPSMSTITHSSHMDIFQNLAVDL
DTEGRYLFLNAIANQLRYPNSHTHYFSCVLLYLFAEANTEAIQEQITRVLLERLIVNRPH
PWGLLITFIELIKNHQYKFWTHEFVHCAPEIEKLFESVARSCMQQKQAPPRETSESRE
NT seq
7377 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttgtgtagattctttgtctttggcactggggcaaattagctttgcagtcaac
gatttgactaagaagaactacaaagctactttaaaggaaatacacgagctgattgaaaaa
catggctatgaggcagagcgtcatttattccgttgtttattttcctttattgacttcact
ggagatggcaaaaataatggcaaagactttctacagtgccagtttctaattcaagaatgc
cagatgcttgtctccaagcccaacttttcctctatcttgtgttttgccattgaaagtcca
gagcataagcagcgtacgttgaggccttcatctcaattactacctaacatgagcagagtt
ttgaagcttaacaaggtccaggaggttatctttggtcttagtcttcttagttcatcaaat
gaagatctaaaaagtcatgctgcccagttcgtaaaacacaaattaccagatcttttgagg
tcctatatagatgcagacgttggaagtgtacaagaaggagggctgactgatgttgcaata
gaagttttgcatcgtcttctcactcatgtagtacatgggccaagggagcaagttggcgtt
ggagatgatcaagtgacagcctttgtggaaacattgaagaaagattttcccaaagaacgt
gtccctgttgtgttggcaccacttctttacccagaattacaggatatttcaccagacaat
cttattccagaaccgtctattttttctaaatctgtgatggaagatgatttagctgacctt
attcatgaaataggatattctagttgtgcaagtgtcgatgaatgtaaaaatactctaatc
cactttggtgttcaagatataaccccatcatctgttgccagagttattggaatgatggtt
aaaactgtgtttggccttggtgaacatgttactatacaaaactatggcagcagctctgtg
tctttggacaaacttggacttagtgaactcactcctggacctgctacatggaatgtggaa
gtctttgttcaaactttgaaagagatgattcctcttcttagttggcgacaagttattcaa
gaatttgattatcctgaatttcatgttccaagccgggaaggactccagcttctattcaca
gcttgccacaggggtttgatggagatatttccagtggatgtcctgtataggacatggaca
aatacagacggccagttgtcctggatccaacaagtcctatccaatcctgatgttttctgt
tttgctgattacccttgccacacagtggtgattgatctgctgaagacagcaccggaggat
gataacagagagacagccacatggaagtcactcaatctgtctgaaacacttctgaggtta
gctgaggcaggtcattatgagacagtcaaatcactgttcacatttcctttgaagcactgc
ccggatgttttactgcttgctttactacagatcaatcccctgtggcatacactgcgaaat
gagcttgttttacaactcatcccagtgttcctggccaatcatcctaattctggcagcgtt
ttacactatgtctggcatggacagggtcagtcagcatcgattcgtcaacttgtaatgcaa
gctatggctgaatggtattcaaaaggagacatggatcaaggcaggctatcaagaatatta
gatgtggctcaagacctgaaggcattgtccatgttattgaatggctctccatttgtgttt
gtgattgaccttgctgcccttgcatctcgtcgtgaatatctaaagctggacaaatggtta
aaggacaaactcaaggaacaccaggaggaatttgggcaagcctgtgttgcttttctgcga
cgccgctgtccttacttattgggtatgtccttagataaagaacttcctaagagtgttcag
ctaccacaggagacagttgtaactatgctttcctgccttcagtcatttttggggcaagca
tctcctgaattggctgaaaccataagtcaaatgctgacaaaccatggtcctttagtcaag
gtgcggcccagtgctgctgtggttggaattccttttaaacgacaaggtagcttggatggc
ggacaacttcaaaatgtattggctggacagcttgattcgctcacaggactcaacattccc
acttcatctcttccggccacacctgccacacccacctcgcagttaccatctttcccaccc
catccccttacgggcaatgcacttggaccctcaggcagcgtgggagctgtgggtagtata
ggttcaggcctcccatcacaggcagcagtgcagaaaccaccatcccaactggggcagctt
cctcttagcactccaggtgctacttcaagctctggccttcaatcaccaagtttcagttct
tcccaaaaccccttgctgcagcaattgcaccaagcaggcggtctggcacagtcttttgga
ggatcagcaatagataatgccagattgttagctggtcttggaatccaaaaacagcttgga
ggaagttctttactgcaacaacagcagcagcaaacaacgcttttatctcagtcaaggaat
caagctgataagttacgcaccgtatcaacagcagatgtgtctcaggtctggccgggtatg
gaccagtcttttacaaaagaagtggaagatgaagccaattcatactttcaaaggatttac
aatcacccacctaatccaacaattagcattgatgaggtgttagaaatgctcaagaaattc
aaggattcaccagttaaaaaggaaagggatatatttctctgcatgcttcgaaacttgttt
gaagagtacagattctttcctcagtatcctgacaaggaacttcacacaacggcttgctta
tttggtggtattattgagcaaggattagtgacatacatggctctgggaattgcacttcgc
tatgttttagaagcattgaggaaaccatttggttccaagatgtacatgtttggaattgct
gctttggatcgattcaagacaaggctcaaagattatcctcactattgccagcatcttgcg
tcaattccgcactttatggaatttcctcactccttgatagaatatattgagtatggacaa
cagtcaagggaaccattgttaggaggaaggaacattcaggagccactaacatcaagacta
ctgaaccgaacaacgccaacactaacaagcgcaccaggcagctcaacttttactagcact
gcagtgagcagatctgtacctcttggtcctagtattcctccagggccatctgttcctcta
cctccatcaattcctttggtttccacctcaactgccacatctctctcttccacaaagtct
tcatctgtttcagaaaatgcttctgcatcatctcctgttagaagcaaggaaccatccatt
gcaacagcaaataacattgatacacttttgggtgcaactgaaacaagtgaaatagttcaa
cctccagaatctgttcaagacaaagtgcactttatctttaacaatatttcacaaacaaat
ttacaacaaaaagctgaagaactcagaaatctgatccaaagtgaatacatattgtggatg
acacagtatctggtcatgaaaagagccagtatagaacccaactatcatcagctgtatttg
gagttcatggaatcagtagagttaacaaaccttgctagggaagtgctcaaggaaacgtac
agaaacataaaggtgctcctgcaatctgacaaggttccagcaaatttctctgatcgatca
ctactgaagaatcttggtcattggctaggattgcagaccttagcaagaaacaaaccaatc
cttatgaaggatcttgatctcaagtctttgatcattgaagcttatttcaaagggcaacag
gaaatgctgtatgtggttccatttgttgccaaagtcatagaatcatcagctaaaagtaaa
gtgtttaaaccaccaaatccttgggttatggccatcatgtctgttttggtagaattgcac
cagatgcctgatttaaagctgaatctcaagtttgaagtggaagtgctttgtaatacactt
tctcttgagatgaaggaactgaaagcatcagagcttttgaaggatcccgagcgattaaaa
cacatccctcaccaattgtcatccccagagaaagaaaagcaatctgttgtcagcaacagc
tccacccctaccccaacaggatcagcacaacaaggacaacctccagtggctcccccaccc
cctcagtattcatatcaagaaatcaatgtggcctcactggctggtttggcacctcacatt
cagatcaatgcacagatcccgatatttcagcagcatccacacctgaggcagtttgtgcgc
ccggctattgaacgggccgtgcaggaacttgtccatccagtggtggaaagatcaatcaaa
atctgtcttacaactgctgagatgattgtgaagaaggattttgctctcgatcctgaagag
tcccggatgagagcagcagcgcatcacatggtacgcttcatgacagcgggcatggcattg
atcacgtgtcgagagccgctactgatcagcattaacaataatttgagatcaaacttcctt
gctgcacttaggggtgcaaaccagcagcagaaagacatgattgaacaagctgcgtcagtt
ataagcgaggataacacagaactagcctgtgcattcatccagaaaacagctgtggagaag
gcgttgcccgaaatggacaagcgattaaccacggaatttgatcttcgtcgcattgctcgc
agtgagggtcgtcggtactgtgaccccgtggtgttgacttatcaagcagagcgcatgcct
gaacagattcgattgaaggttggaggagtaaatgccaatcagacagcggtctacgaggag
tttgcgaggagcatacctggattccaacccccctcatccggggaggccatcactactcca
cccctaccaaaacctattggaattctcggcaatgctgaggcgtttatgccagaggaagtc
gtccagatactgagtaagtgtgcagcggaaattgaacagcatcttcacgccatcatagca
ccaccaaccaatcagcatgtcgctaccatacacagcctactggaaactgtagtgcaggcg
cgcatatcaagagacaacatggccgctcttaggcttttacacaaggcagtggaagggttg
ctggagggtgttggcacgttaggaaatgatgccgaactgtcgttacgctaccgtgactgt
catcttattgtgttaagaggactccaggatccacgtggatatgggcttatgtggacagct
agacacgtgacaaagtttgtgtgtgagtgccctcccgagttgaagtttaacgtagatgct
attgacattctgattcgcagtcatttgttgaacatgagggagtttgatcttcaccttgtg
cagtgtatcgacaacggccataacattcaagcgttgcattttgctattcagcttgctaag
tatgtgtcagatgacaaacagagtccacatgttactgagaatgatctataccataccatt
gaagcgttgacaagaatagctcacagccggcagaattctgatgggttgtcctcgttcctg
gagtctagtcacaatggtcctctgccatcgcagcctgtgggtactcatcaggagattggt
gataacaaggcccctggaggccccacatctctgacctctggcgtgtccgcttcaggtgtc
actggttcatttcatgtctatgaggatcctcctgggctgcacgaaaaggtcgagtactta
ttaagagaatgggttcgcctatgtcaccaacccggagcaggaaaggaaagcgaaaaggcg
ttttccacgtttgtggccctattacaccagcaaggcattctgcgaacggatgatttgatc
acgagattcttccgcataagtactgaactgtgcgtagaagtgacttaccgagctctgggt
gaccatcccaacagcccgacaacggcacgagccaaatgttacaataccttggatgcctac
tgtcggttgatagcactgctagtgcgtcactcaggcgatgcctccaataatgtcaccaaa
atcaatctcctaagcagggttcttggaacagtagctacagtgctcttccaggatcacgaa
atccgtcacacggaatttcaacagttgccttatcatcgtacattcataatgttactagtg
gaactcaaccaacccgaaccaattcttgaggcaattaattttcaggtgttgcaaacattc
agtactgtgtttcatgcccttcgtccatcccgggctccggggtttgcgtacgcatggtta
gagctgatatctcatcgcttactcatgtccaagcttctacttaacacaccacagcagaag
ggttgggtgctatttcagcagctgttaattgacctgtttaagtttttagcgccatttttg
cgtaacgctgagctcgctaagcaaacacacttgctttacaagggaacattgcgcgtcttg
ctggtgcttcttcatgacttcccagagttcctttgtgattatcacttcagtttttgtgac
gtcatccctcctaactgcatccagatgagaaacttgattctcagtgcctttccacgcaat
atgaggctcccagatccctttacaccgaatttgaaggttgacctgttaaccgacatcgcg
cattctcctcgtatcttgaccaatttcgcctctgccatccagcctgccagctttaaaaag
gatcttgattcttatctcaagactcgtgctccagtgacatttctgacagagctcaggtcg
cacctgcaggtatccaatgaaccaggcacccggtataacgtaccactaatgaatgcgctg
gtcctttatgttggtacccaagccatcacctacatacacagtaagagtgggacaccctcc
atgtcaacaatcactcattcgtcccacatggacatcttccagaatttagccgtggatctg
gatacagaaggccgatatcttttcttgaacgctattgcaaaccagttgcggtaccctaac
agccatacacactacttcagttgtgttttgttgtacttatttgctgaagccaacacagag
gctattcaagaacagatcacaagggtactgctagagcgattgatcgttaatagacctcat
ccgtggggtctcctgatcacattcattgagctcatcaagaaccatcaatacaagttttgg
acgcacgaatttgtacactgtgccccggagattgaaaagttgttcgagtccgtagctcgc
agctgtatgcaacagaaacaggcgccgccccgagaaacaagcgaaagcagagagtga
DBGET
integrated database retrieval system
