Montipora foliosa: 138012425
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Entry
138012425 CDS
T10576
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03040
Spliceosome
Brite
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138012425
Spliceosome [BR:
mfoo03041
]
Complex C
Other components
Step II factors
138012425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_16
PhoH
TsaE
PAT1
Motif
Other DBs
NCBI-GeneID:
138012425
NCBI-ProteinID:
XP_068715294
LinkDB
All DBs
Position
8:26378984..26599674
Genome browser
AA seq
1170 aa
AA seq
DB search
MDELQQLEQLSLVSKICTELDNHLGINDKDLAEFIIMLSEKNPTLDKFRAALAENGAEFP
ESFTSNLLRLIQKMQPIKSGIGDQNPGRSVEGKENSLTGVEQKRSSFPGLCIPDEIAGGN
KSQEEDEKVASFALGELEALMSKAKHSSLKASRKRPRSHSRSPESDKDRQRQKEREKDRR
RYSGSESRSKRKDQPRDNHHGSTSKEKSPCASPVVSQIYNGKVTTIMQFGCFVQMEGLRG
RHEGLVHISQLRREGRVASVGDVVQRGQRVKVKVLSMAGSKISLSIKDVDQDTGEDLNPT
RSRQPVGGEVSEMARNPDRPMGIPVVPVFEDDEPSTKKKVQRITSPEKWEIKQLISAGVL
DKADYPDFDEETGVLPKDDDSDEDIEIELVDEEPAFLRGQTKLSVAMSPVKIVKNPDGSL
QRAAMTQSALAKERRELKQAQREAQADSIPKDLSKLWIDPVPDVGGNKAVFAQDMRGVGL
ANDDMPEWKRATFGGNKASYGKKTNLTILEQRQGLPIYKLRQELLKAVHENQVLIVIGET
GSGKTTQITQYLAEEGFLSIGKLACTQPRRVAAMSVAKRVSEEYGCRLGQEVGYTIRFED
CTSTETKIKYMTDGMLLRECLLDPDLNQYAIVILDEAHERTISTDVLFGLMKKTVKKRPD
LKLIVTSATLDAVKFSTYFFEAPIFTIPGRTYPVEILYTKEAETDYLDASLITVMQIHLT
EPPGDVLVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPP
GSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKSGIDALVVTPISQAQAKQRSGR
AGRTGPGKCYRLYTERAYRDEMLPTAVPEIQRTNLASTILSLKAMGINDLLSFDFMDPPP
METMISAMEQLHSLSALDDEGLLTRLGRRMAEFPLEPQLSKMLIQSVHLGCSDEVLTIVS
MLSVQNVFYRPKDKQALADQKKAKFHQSEGDHMTLLAVYNSWKNNKFSNPWCFENFVQAR
SLRRAQDIRKQMLGIMDRHKLDVVSCGKTTSRAQKAITSGFFRNAARKDPQEGYRTVTDN
QVVFIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTVDPKWLVEFAPAFFKMGNPTKLS
KRKRQERLEPLYNRYEEPNAWRISRAFRRR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctgcagcagcttgaacagctatctcttgtgtctaagatttgcacggagttg
gacaatcacttgggcatcaacgataaggatctcgcggagttcataataatgcttagtgag
aaaaaccccacactggacaagttcagagcagctttggctgaaaatggtgcagaatttcca
gagtcatttacttccaatttgttgagattgattcagaagatgcagcctataaagtcagga
ataggtgatcaaaatccaggcagatcagtggaaggtaaagaaaatagtttaactggtgtg
gagcagaagcgttcatcatttcctggactatgcattcctgatgaaattgcggggggaaat
aagagccaggaagaggatgaaaaagtggcctcgtttgctcttggtgagctagaagctcta
atgtccaaggcaaagcattcttcattgaaagctagcaggaaaagacccaggtcacattca
agaagtccagaaagcgacaaagacaggcaaaggcaaaaagaacgggaaaaggatagaagg
agatacagtggaagtgaatccagaagtaagagaaaagatcaaccaagagacaaccatcat
ggctctacttcaaaagagaagtcaccctgtgcctctccagttgttagtcaaatctacaat
ggtaaagtgacaacaattatgcaatttggatgctttgtgcagatggaaggcttaagaggt
cgacatgaaggcttggtacacatatctcagctcagacgtgaaggacgagttgctagtgtg
ggtgatgtagtacaaagaggtcaaagggttaaggtgaaagttttgtcaatggccggaagc
aagatcagtctgagcattaaggatgtggatcaagacacaggtgaagacttaaatcctacc
agatctagacagcctgtgggaggtgaagtcagtgagatggcaagaaacccagacagacca
atgggcatcccagttgtacctgtttttgaagacgatgaaccaagtacaaagaagaaagtt
caaaggataacttcaccagaaaagtgggaaataaaacagcttatttcagcaggtgtgttg
gacaaggctgactaccccgattttgatgaagagacaggtgttcttcctaaagatgatgac
tcagatgaggacattgaaattgaacttgtggatgaagagcctgcctttttacgagggcaa
actaaactgagtgtggccatgagtcctgtgaagattgttaagaatcctgatggctccttg
caaagagctgccatgacacaaagtgcgttagctaaggagaggagagaactcaagcaggct
caaagggaagcacaagcagacagtatacccaaagacctcagcaagctctggattgatcca
gttccggatgtgggtggtaacaaagcagtctttgctcaagacatgcgaggtgttggattg
gcaaatgatgacatgccagagtggaaacgagctacctttggaggaaacaaagcttcctat
ggaaagaaaacaaacttaactatcctggagcaaaggcaaggattacccatatataaacta
cgacaagaacttttaaaggctgtccatgaaaatcaagtgttgattgttatcggagaaaca
gggagtggaaagacgacacagataacacagtacttagcagaagaaggcttcctttctatt
ggtaaacttgcgtgcacccagccccgtcgagtagctgcaatgtctgttgctaagagagta
tcagaagaatatggatgtcgacttgggcaggaggttggctacaccattcggtttgaggac
tgtactagtacggaaaccaagattaaatacatgacagatggaatgctgttgagagaatgt
cttcttgaccctgatcttaatcaatatgcaattgttatacttgatgaggctcatgaacgc
acaataagcacagatgttctttttggattaatgaagaaaactgtgaaaaagcgccctgat
ttgaagttgattgtgacctcagcaacgttagatgcagtgaagttctcaacatattttttt
gaggctccaatatttacaatacctggaagaacatatcctgttgagattttgtatacaaaa
gaggcagagacagattacttggatgcttctctcatcactgtaatgcaaatccatttgaca
gaaccaccaggcgatgtcctagtatttttaacaggccaagaggaaattgacacagcctgt
gagatactatatgaacgaatgaagagcttgggtcctgacgttccagaactgattatttta
ccagtatacagtgctctaccatcggagatgcaaaccaggatatttgatcctgctcctcct
ggcagcagaaaggttgtaattgccaccaatattgctgagacatcactgaccatagatggc
atatactatgtggttgatccaggatttgtcaaacaaaaagtctacaactcaaagtcagga
attgatgcattggtcgtgacaccaatttcacaggctcaagctaagcaacgctctggtagg
gcaggtaggacagggcctggtaagtgttatcgcctttatacagagcgtgcgtacagagat
gagatgctaccaactgcagtccctgagattcaacgtacaaaccttgcaagtactatactg
tctctcaaagccatgggcatcaatgacctattatcctttgattttatggacccaccaccg
atggagacaatgatctcagctatggagcaactacattccctcagtgccttggacgacgaa
ggcctactaaccagattaggaagaagaatggctgaatttccccttgagccacagttgtcc
aagatgttaattcagtctgttcatctaggatgtagtgatgaagtattaaccattgtttcc
atgctatctgttcaaaacgtcttctatagaccaaaggacaaacaggctcttgcagaccaa
aaaaaggctaagttccatcagtcagagggagaccacatgaccttgcttgcagtgtataat
tcgtggaagaacaacaaattctcaaacccctggtgttttgaaaactttgtgcaggccagg
tcgttgaggcgagctcaagacatcaggaaacaaatgcttggaattatggacaggcacaaa
ttagatgttgtatcatgtgggaagacaacttcacgtgctcaaaaggctataacaagtggg
ttctttcgcaatgctgcaagaaaagacccacaggaaggttaccgtacagtgactgataac
caggttgttttcattcacccctcaagtgcgctatttaatcgtcagccagagtgggtggta
tatcatgagcttgtccttacaacaaaggaatacatgagggaagttaccacagttgatcca
aaatggcttgtggaatttgcacctgcatttttcaaaatgggaaatccaaccaagctgagc
aagcgcaagagacaagaaagattggagccgctgtataaccggtatgaagaaccaaatgct
tggagaatttcaagagcctttagaaggaggtga
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