Montipora foliosa: 138012549
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Entry
138012549 CDS
T10576
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mfoo Montipora foliosa
Pathway
mfoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138012549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfoo03021
]
138012549
03036 Chromosome and associated proteins [BR:
mfoo03036
]
138012549
Transcription machinery [BR:
mfoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138012549
Chromosome and associated proteins [BR:
mfoo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138012549
PBAF complex
138012549
GBAF(ncBAF) complex
138012549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
SpeFL
BRCT_2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
138012549
NCBI-ProteinID:
XP_068715454
LinkDB
All DBs
Position
8:complement(21304133..21336859)
Genome browser
AA seq
1068 aa
AA seq
DB search
MAARKKDGAPDWKYYESAETVSLFEPVKQYLLKNCKKYVQMEPPTNKTLASLTAQLLQFQ
EDNFGKDVSKQALLTKLPMKMFMDFSSGGSLCVILASVFKTKMEQGWRRFDFQSPSRMDR
NVELFLNIEKALKEAKLLTVPQVFITPEIEAKLAAKLKDIVKRHNGAITDDRSTATHVVY
EPPPPFPEEEWLRPLLKQDKQVLVHWWYYPDSYDTWVPANDIEDEPQPEPQHQGPWQVNA
RWLTDLDVFNEWMNEEDYELADTDGSGNKRETSPALGKTRRKSLRTGASSDELPSSPDGG
KLLKKRKRSPSPDQKKKKKLGAPPNPKKKTGKEEDNDSDDATKDLPNPSPIPNVEEVTTS
TASASKGKEIDLQPMKGNSLTDISESGKPEEGDGDEGESGSQMDTQEQAEESTEQSAPTS
PSSSQQKDGIFKEPLSIPDAEPHDDNLTEQTHHIIIPSYASWFDYNSVHAIERRALPEFF
NGKNKSKSPEAYLAYRNFMLDAYRLNPTEYLTATACRRNLAGDVCAVVRVHAFLEQWGLI
NYQVDADGRPAPMGPPSTSHFHVLADTPAGLQPLQPAKTQMPASQQMIQFKDDFGGKETL
RSGLTGANFGLRSDQYLSKKSQKAATATKEWTEQETLLLLEGLEMFKDDWNKVAEHVGTR
TQDECILHFLRLPIEDPFLEDVQLGPLSHQPVPFSQQGNPIMSTVAFLASVVDPRVASAA
AKAALEKFSEMKEEIPQAVIDSHVKNAANARADKAKPENADENTDEKSQPMEVNGSQSTG
TDGAETGAQDVKMEDASEANKETENGEKMQAINEENIAKAAASALAAAAVKAKHLAQVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAERQQFHQEQLKA
AEVRARAASGHLSPSQSSPGQIQPLSQVSQPHQHFSQQPQVHQQQKQPQQLPPQATHPGV
STGLIAQVTSSPQQGVTSGQPVGSNPPSASPSPAPAMNPASIPPIGSHPASGCSTPVSFI
GSNAASPASGPGTPSSAPLGHASSGQMTHGPGDNSVSSPVPPSSGMME
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcaagaaggatggcgctccggactggaaatactatgaatcggctgagact
gtgtctctttttgagccagtgaaacagtaccttctaaaaaactgtaaaaagtacgtgcaa
atggaacctccaacgaacaagaccttagcttcactaactgcacaattactacagtttcaa
gaggataactttggtaaggatgttagcaagcaagcccttctaacaaaactaccgatgaag
atgttcatggatttctcctctggaggaagtctctgtgttattcttgcaagtgtattcaag
acaaaaatggaacaaggatggagaagatttgacttccagtctccctcacgtatggatagg
aatgttgaacttttccttaatattgagaaagcactcaaagaggcaaagttgttgactgtc
ccacaagtgtttataacgcctgaaattgaagctaaacttgcagcaaagctcaaggatatt
gttaagaggcacaatggtgccatcacagatgatagatctactgcaactcatgttgtgtat
gaacctcctccaccttttccagaagaggaatggttgcggccactgctgaaacaggacaaa
caggttcttgttcattggtggtattaccctgacagttatgacacatgggttccagccaat
gatattgaagatgagcctcaacctgagccccaacaccagggaccttggcaggttaatgcc
cgctggctgacggaccttgatgtgtttaatgaatggatgaatgaggaggactatgaatta
gcagatactgatggaagtggaaataaaagagaaacttccccagctttaggaaaaacaaga
aggaagagcttaagaacaggagcaagttctgatgaactacccagcagcccagatggagga
aagctgttaaagaagagaaagagatctccttcaccagaccagaaaaagaaaaagaagctt
ggggcaccaccaaatccaaagaagaagacaggaaaagaggaagacaatgacagtgacgat
gcaacgaaggatcttccaaatccatctccaattcccaatgttgaggaagtcacgacttct
actgcttcagcttcaaagggaaaagaaattgatttacagccaatgaaaggaaactcgtta
acagacatctcagaatcagggaaaccagaggaaggtgatggagatgagggagaatcagga
agccaaatggatacacaagaacaggcggaagaaagcacggagcaatcggctcccacttcg
ccttcatccagtcaacagaaggatggaatattcaaagaaccactcagcataccagacgca
gaaccacatgacgataacttgacagaacagactcatcacatcatcatcccaagttatgct
tcctggtttgactacaacagtgtgcacgctattgaacgaagagccttacctgaatttttc
aatggcaaaaacaaatccaagtcaccagaagcgtacctggcctatcgtaatttcatgttg
gatgcttaccgcctcaatcctacagaatatcttacagctactgcttgtcgacgaaacctc
gctggagacgtgtgtgctgttgtcagggtccatgcatttttagagcagtggggcctgatc
aattatcaagtggacgcggacggtcgaccggcgccaatgggtccaccatcaacatctcat
tttcatgtgttagcagataccccagcaggcttgcagcctctccaacccgcaaagactcag
atgccagcttcgcagcaaatgattcagttcaaagatgattttggtggaaaagagacactc
aggagtggtttaactggtgccaattttgggcttcgctcagatcagtatctttccaaaaag
agtcaaaaggcagcaacagccacgaaagaatggacagagcaagagacactcctactgtta
gagggcctggaaatgttcaaagatgactggaacaaggtggcagaacatgttggtacccga
acacaggacgaatgcattttgcattttctgaggctacccattgaagacccgttcttagaa
gacgtgcagctcggtcccttgtcccatcagcccgtgccattcagtcaacagggaaaccct
ataatgtcaacagttgctttccttgcttcagttgttgaccctcgtgtggcaagcgccgct
gccaaagccgctttggagaaattttcagaaatgaaagaagagattccccaggctgttatt
gacagccatgtgaagaatgctgctaacgctcgagcggacaaagctaaaccggaaaatgca
gatgaaaatacagacgaaaaatctcagccaatggaggtcaacggaagtcaatctacaggg
actgatggagcggagacaggggcacaagatgtgaagatggaagacgcgtcagaagctaat
aaggaaacagagaatggcgaaaaaatgcaagctatcaacgaagaaaacatcgccaaagct
gcggcctctgccctggcagctgctgctgttaaagcgaagcacttggcccaagtggaagag
aggaagatcaagagccttgtggcgttgctcgtggaaactcagatgaaaaaactggaaatt
aaacttcgccactttgaagaacttgagaccatcatggaccgggagcgtgaggcgttggaa
taccagcgtcaacagctacttgctgagcgtcaacaatttcatcaagagcaactgaaggct
gctgaggtgcgcgcacgcgcagcgtctggtcacttgtctccatcacagtcctccccggga
cagatccaaccgctgtctcaggtctcccaacctcatcaacatttctcacaacaaccgcag
gtacatcaacaacaaaagcaacctcagcaacttccaccacaggcaacccatccaggagtc
tccactggcctaattgcacaggttaccagttcacctcaacaaggtgtaaccagtggccag
ccagtgggatccaatcccccatccgcttcgccatctcctgcgcccgccatgaatcccgct
tccatacctccaattggttcccacccagcctctggctgtagcactccagtgtcatttatt
ggatctaatgctgcatccccggcttccggtccgggtactccgagttccgccccactagga
catgcctcttccggacagatgactcacgggcccggtgataattcagtctcaagcccagtc
cccccatcttctggcatgatggaataa
DBGET
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