Montipora foliosa: 138012810
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Entry
138012810 CDS
T10576
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mfoo Montipora foliosa
Pathway
mfoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138012810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfoo03019
]
138012810
03012 Translation factors [BR:
mfoo03012
]
138012810
Enzymes [BR:
mfoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138012810
Messenger RNA biogenesis [BR:
mfoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138012810
Translation factors [BR:
mfoo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138012810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_19
nSTAND3
ResIII
AAA_22
ATPase
dsrm
AAA_25
TsaE
PhoH
Cas3-like_C_2
NACHT
AAA_7
Motif
Other DBs
NCBI-GeneID:
138012810
NCBI-ProteinID:
XP_068715803
LinkDB
All DBs
Position
8:51221061..51246521
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AA seq
1132 aa
AA seq
DB search
MAHSRGFNRRPGRNFQPRFIPPFQAKSPPPLMRATPPSFEARPRMPFASDFVIGGGALQN
SYPPEKPPSFVRQIGKSAIKKPAHICVGFEASQRFPTAKEKLHNVLQGAMKGHSLTFNCQ
EMGQFWQATVRIPWPREMSFYAEGPTRKEAEKNAAALACVELERMGAANISSAAVIKKEA
VQSMDEPKWIYINEEQLSKVESFLIKNSVLSQQLYRNHLQPVHRPCPRVVSASEGRALGE
SSSGASSNMSASQINVDAKFWKDSNPQDVDFSSWDMPHTIEMASSKNGQSLATIDNNYSS
VTCAVKDIFSGLPWNELKAEESAKLNEQLLREFNQRQRMLERRMSWFNEPPNKLPVLDHR
KKIVDLIEENKVVVLSGETGCGKTTQIPQFILDNAVKNGRGSSCNIVVTQPRRIVAMSIA
ERVAWERGEVLGKSIGYQVRLEGVPPTQSGRILFCTTGIILRRMQNNALLQGVSHVIVDE
VHERDINTDFLLILLKMLLQKSQELKVVVMSATVNSDRFSQYFYGCPSLTIPGFTHSVTE
YFLPDVHQMLGGIPTAFSSPPQYKKFKSSHHFAKVQSDTVTPEADTELVCETILYVCRNY
QEGAILCFLAGWDEISVVHDMLSSKISNAQKSQYLVLPLHSMLPMFNQREVFERPPVGVR
KIVLATNIAETSITIDDVVYVINAGNEKEKIYDAANKVSCLTTHWTSQASVIQRRGRAGR
CKPGFCFNLFSKEQFENMARYQTAEMQRTSLEEIVLQTKIQCSDDSCNVKDFLSQALDPP
SPFSVQSAISELKEIGAMDYQEDLTTLGRHMAYLPVEPRIGKMIIYGAIFRCLDPVLTIA
AGLSYKDPFVTPFSCREQADQSRKEFARGSKSDHVALLNAYNGWAEAISQSRGKEFVDQR
FLHWGTLNMIRGMRDQFIRLLEESGLVRSFGSGHSLNTFGSNLELVKAVLCAGLFPNTVK
VGLGIESKGRCGKKRVRVSFRTKTDARVLLHPSSVNSDEKQFASQWLMYNDKIKSTQVFI
RDSSMVHPVALICLSGKDVRELVHEKRHGLSQSLQQPRVTLAVDGDRWMAFHCSPRLARV
LQTIRDDINKMVSCNISSACSNTALFHHHTQLIETLTLLLTLPFQESLPNTH
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcgcactcaagaggattcaatcggcggcctgggaggaatttccaacctaggtttatt
ccaccatttcaagcaaaatctcctcctcccttgatgcgagcgactcctcctagtttcgag
gccagacctcgcatgccttttgcgtctgattttgtaattggcggaggtgccctccaaaat
tcttatcctccggaaaaacctccaagttttgtacgtcaaatcggaaagtcggctatcaaa
aaacctgctcatatttgtgttggttttgaggcttcgcagagatttccgaccgccaaggaa
aagctacacaatgtccttcaaggtgccatgaaagggcattcattgacatttaattgccaa
gaaatgggtcagttttggcaagccaccgtcaggattccatggccaagggagatgtcgttt
tatgccgaaggtcctacaagaaaagaagcggagaaaaatgcagcagcgcttgcttgtgtt
gagttggaaagaatgggagcagcaaacatcagttcagctgcagttataaaaaaagaagct
gtccagagcatggatgaacccaagtggatttatattaatgaggagcaactctccaaggtg
gagtcttttctgatcaagaatagtgttcttagtcagcaactgtacaggaaccatcttcag
ccagttcatcgaccatgccctagagtagtaagtgcttcagaaggtagagcattgggtgaa
tcttcttccggtgcctccagtaacatgtctgcttcacagataaacgtagatgcaaaattc
tggaaagattccaatcctcaagatgtagatttttccagctgggatatgccacatacaata
gagatggcaagctctaaaaatggccaaagtttagcaactatagataataattattcttct
gtcacctgtgctgtgaaagacatatttagtggcttaccttggaatgaattgaaagcagaa
gaaagtgctaaacttaatgaacagttgttgcgagaatttaaccaaagacagcgtatgttg
gagaggagaatgtcatggtttaatgaacccccaaacaaattgcctgtcttagatcacagg
aaaaagatcgttgatttaattgaggaaaacaaagttgttgtattatctggagaaacagga
tgcggcaaaaccacacagatccctcagttcattctagataatgctgtaaagaatggcaga
ggatcaagctgcaacattgtagttacacagccaaggcgtatagtagcaatgtcaattgca
gaaagagtggcctgggaaagaggagaagtcctgggaaagagtattggttatcaggtgagg
ctagaaggcgtacccccaactcagagtggtcgcatcttattttgcactacaggaattata
ttgagacggatgcagaataatgcccttttacaaggtgtcagtcatgtcattgttgatgaa
gtacatgagcgagacatcaatacagatttcctgttgatcctcttaaagatgttgctccaa
aagagtcaagaactgaaggtggttgtgatgagtgcaactgtgaattcagatagattttca
cagtacttttatggctgtcccagtttgacaattcctggtttcacacattctgtaacagag
tattttttgcctgatgttcatcaaatgttgggaggaataccaacagcattttctagccca
ccacagtacaagaaattcaagtccagccaccattttgcaaaggtgcaaagtgatacagtg
actccagaggctgacactgaacttgtctgtgaaactattctgtatgtatgcagaaactac
caagagggagctattttgtgctttttggctggttgggatgaaatcagtgttgttcatgac
atgttgtcatcaaagataagcaatgcacagaaatctcagtatcttgtgctgccacttcac
tctatgcttcctatgtttaatcaaagagaagtgtttgaaaggccccctgttggagtccgc
aagatcgtgttggcgaccaatatagcagagacttcaatcacaattgatgatgtggtgtat
gtcataaatgctggaaacgaaaaagagaaaatatatgatgcagccaacaaggtatcctgt
ttaactacccactggacttcgcaggcaagtgttatccagagacgaggcagagcggggcgg
tgcaagccgggtttctgtttcaacctcttctcaaaggaacagtttgaaaacatggcccga
taccagacggctgaaatgcagaggacgtcgttggaagaaattgtcctgcagacaaagatt
cagtgctcagatgattcctgtaatgtgaaagactttttgtcccaggctctcgatcctcca
tcaccattttccgtacaaagcgctatatcagaattgaaggaaatcggagcaatggattat
caggaagatctaacaaccctcgggagacacatggcttatttaccagttgaaccgcgcatt
ggcaaaatgatcatctatggtgctatctttaggtgcttagatccagtattgacgattgct
gcgggccttagttacaaagatccgtttgtgacaccgttcagctgtcgagaacaggctgat
cagtctcgtaaagaatttgcacggggcagcaagagtgatcacgtggcactattgaacgct
tacaatggatgggcagaagccataagtcagtcacgtgggaaagagtttgttgatcagcgg
tttcttcattggggcacgctcaacatgattcgtggtatgcgagatcaatttatccgactt
ttggaagagtcgggccttgttcgcagctttggcagcggtcattcgctcaacacttttggt
tcaaatttggagcttgttaaggctgtgctatgcgctggactttttccgaatactgtgaaa
gttggtcttggtatagaatcgaagggaagatgcggaaagaagcgtgtcagggtctccttc
cggaccaaaactgatgctcgcgttttacttcatccttcttcggtgaactctgatgagaaa
caatttgccagccagtggttgatgtataacgacaagattaaatctacgcaagtcttcatc
cgggacagtagcatggttcacccagtggctttgatttgcttgtctggaaaagatgttagg
gaattagtgcacgaaaaacgacatggcctctctcagtcacttcagcaacctcgagtgacc
ttggctgtggatggtgaccgctggatggctttccattgttcaccaaggctcgccagagta
ttgcagactatccgagatgacatcaacaagatggtgtcttgcaatatctcatcggcctgt
tcaaatactgcattattccatcatcatactcagttgatcgaaactctaaccctgctctta
acattaccatttcaagaatctcttccgaacactcactga
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