Marvinbryantia formatexigens: NQ534_00890
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Entry
NQ534_00890 CDS
T08439
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfor
Marvinbryantia formatexigens
Brite
KEGG Orthology (KO) [BR:
mfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfor03032
]
NQ534_00890 (topA)
03400 DNA repair and recombination proteins [BR:
mfor03400
]
NQ534_00890 (topA)
Enzymes [BR:
mfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NQ534_00890 (topA)
DNA replication proteins [BR:
mfor03032
]
Prokaryotic type
DNA Topoisomerases
NQ534_00890 (topA)
DNA repair and recombination proteins [BR:
mfor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NQ534_00890 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DmmA-like_C
Toprim_4
Lar_restr_allev
HypA
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
UWO25084
LinkDB
All DBs
Position
complement(177426..179432)
Genome browser
AA seq
668 aa
AA seq
DB search
MAKNLVIVESPTKVKTIKKFLGSNYEVAASNGHVRDLPKSQLGIDVEHGYEPKYITIRGK
GELLASLRKEVKKADKVYLATDPDREGEAISWHLAHALKLDESKMRRITFNEITKNAVKT
SLKNPRQIDMNLVDAQQARRMLDRMVGYEISPLLWAKVKRGLSAGRVQSAVLRLIADRDE
EINAFVPEEYWTLNAVLEVPGSKKPLEAAFYGTEKKKMTIRSRDELDAVLKEIEQEEFHV
AEIKTGERVRRAPLPFTTSTLQQEASKVLSFSTQKTMRIAQQLYEGVDIKGNGTVGLITY
LRTDSVRIADEADAAAKEYIAEQYGSDYVSAGSQAKASGKKIQDAHEAIRPSDIGRTPTL
IKESLSRDQFRLYQLIWRRFAASRMASARYETISAKIAAGQYYFTASASRLAFEGFMAVY
TQDSEEDEKSQSVLAKITKETLLVKKELQEKQHFTQPPAHYTEAALVKTLEELGIGRPST
YAPTITTLLTRRYVIKENKNLYMTELGEVVNQMMKKAFPSIVDVNFTANMESLLDKVEEG
VVNWKTVVSNFYPDLKEAVEKAEKELESVKIADEETDVICEQCGRSMVIKYGPHGKFLAC
PGFPECRNTKPYLEKIGVPCPKCGGELVVRKTKKGRRYYGCENNPECDYMTWQKPKPEQE
EEEKQEKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaacctggtaattgtggagtctcccacaaaagtcaagacgataaagaaattt
ctcggttcgaattatgaggtggcggcatccaacgggcatgtgcgggatctgcccaaaagc
cagctcggtattgacgtggagcacggctatgagccgaaatacatcactatccgcggaaag
ggggagctgcttgcgtcgctgcgcaaggaagtgaaaaaggcggataaggtctatctcgca
accgaccccgaccgtgagggagaagcgataagctggcacctcgcacatgcgctgaagctg
gatgaaagcaagatgcgcagaattacgtttaatgagattaccaagaatgcggtgaagacc
tcgctgaaaaatccgcggcagatcgatatgaatctggtcgacgcacagcaggcgagacgt
atgctggaccgtatggtgggctacgagatcagcccgcttctctgggcaaaggtaaagcgg
ggcttaagcgccggaagagtgcagtcggcggtgctccgtctgattgcggaccgtgatgag
gaaatcaatgcgtttgtgccggaggaatactggacactgaatgcggttctggaggtaccg
ggctcgaaaaagccgctggaggcagctttttacgggacggagaagaagaaaatgaccatc
cgctcccgtgatgagctggatgcggtattgaaggaaatagagcaggaggagttccatgtt
gcggaaatcaaaacgggagagcgcgtccgcagggcgccgctgccgttcacgaccagcacg
ctgcagcaggaagcttccaaggtgctgagtttttccacacagaaaacgatgcgtatcgcg
cagcagctttatgagggagtcgatattaagggaaacggtaccgtcggtctgattacgtat
ctgcgtacagattcggtacgtattgcggatgaggctgacgcggcggcaaaggaatatatt
gcagagcagtacggaagcgattatgtgtccgcgggaagccaggcgaaggcgtccggcaaa
aaaatccaggatgcgcacgaggcaatccgtccgagtgatatcgggcggacaccgacgctg
attaaagagtcgttatccagggaccagttccgtctctaccagcttatctggagaagattt
gcggcgagcaggatggcaagcgcccgttacgagacgatctcggcaaagattgccgccgga
cagtattatttcacggcatcggcttcccgtctggcgtttgagggctttatggcggtttat
acgcaggactcggaggaggacgagaagagccagtccgtgcttgcaaaaatcacaaaagag
acgctgcttgtgaaaaaagagctgcaggagaagcagcatttcacgcagccgcccgcccac
tatacggaggcggcgcttgtaaagacgctggaggagcttggcatcgggcgtccgagcacg
tatgccccgaccatcacgacgctgcttacacgccggtatgtgattaaggaaaacaaaaat
ctgtatatgacggagctgggcgaggtagtcaaccagatgatgaaaaaggcattccccagt
atcgtggatgtaaactttacggcgaacatggagtcgctcctcgataaggtggaggagggc
gttgtaaactggaagacagttgtcagcaatttttacccggacctcaaagaggctgtagaa
aaagcggaaaaagagctggaaagcgtcaaaatcgcggatgaggagactgacgtcatctgc
gagcagtgtgggcgcagtatggtgattaaatacggtccgcacgggaaatttctggcatgt
cccggtttcccggaatgccgcaataccaagccgtatctggaaaaaatcggcgtgccctgc
ccgaaatgcggcggggagcttgtggtgcgcaaaaccaagaagggcagacgctattacggc
tgtgagaataatccggagtgcgactacatgacgtggcagaaaccgaagccggagcaggaa
gaagaggaaaaacaggaaaaaaagtaa
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