Marvinbryantia formatexigens: NQ534_03645
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Entry
NQ534_03645 CDS
T08439
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mfor
Marvinbryantia formatexigens
Pathway
mfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQ534_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfor03400
]
NQ534_03645
Enzymes [BR:
mfor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NQ534_03645
DNA repair and recombination proteins [BR:
mfor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ534_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
PIF1
nSTAND3
NAT10_TcmA_helicase
AAA_22
AAA_28
UvrD-helicase
T2SSE
NTPase_1
AAA_16
NPHP3_N
AAA
SRP54
MeaB
SLFN-g3_helicase
Herpes_Helicase
HerA_C
FtsK_SpoIIIE
SAM_SMF
DEAD
KTI12
AAA_5
Rad17
ABC_tran
MMR_HSR1
CbiA
AAA_29
HHH_2
DAP3
MobB
UvrD_C
TrwB_AAD_bind
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UWO25588
LinkDB
All DBs
Position
complement(701902..704151)
Genome browser
AA seq
749 aa
AA seq
DB search
MEKVSGYVEHIIYRNEENGYTVMVLVCDGEEVTCVGTLQSAAEGELIEAEGGYTEHSTYG
RQFQISSYEYKTPEDELSIERYLGSGAVKGVGMALAARIVRRFKGDTFRIIEEEPERLAE
VKGISERKAREIAQQMEEKRDMRKAMLFLQQYGISTALAMKIYNQYGASLYQIVRENPYK
LADDIAGVGFKAADEIASRVGIHTDSDFRIKSGLLYVLAQAMTEGHVYLPQPELMRRASE
LLGVSLEAMEALLPDLAIERKIVIKDVPGAGQGSDGEEVRVPGVYSASNYYLELNTAKML
HDLNISAEISEEAVQRRLEQIEQETGTKLEELQKEAAAAAVSHGLLVITGGPGTGKTTTI
NALIHYFASEGLEILLAAPTGRAAKRMTEATGYGAQTIHRLLEVSGAVEESSAHTHFERN
MQNPLEADVIIIDEMSMVDIFLMHALLSAVTPGTRLIMVGDVNQLPSVGPGCVLKDIIES
ERFPVVRLTKIFRQASESDIVVNAHKINSGEHVVLDNKSRDFFFLKRDEANIIIRVVLAL
VQQKLPKYVDAKPYDIQVLTPMRKGLLGVERLNTILQQYLNPPAPDKREREHAGGVFREG
DKVMQIKNNYQAEWEIRGKYGIAVEKGVGIFNGDMGIVREINTYAEMLTVEFDEGRFVDY
SFKQLEELELAYAVTIHKSQGSEYPAVVIPLLAGPRMLMNRNLLYTAVTRARKCVTLVGS
AEVFYQMIDNRFEQKRYSTLKERICEWNV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtttctggatatgtggagcatatcatataccgcaatgaggaaaacggttat
acagtgatggtgctggtctgcgacggcgaggaggtgacatgcgtcggaacgctgcagtcc
gccgcggaaggagagctgatcgaggcggagggcggctatacggagcacagtacctacgga
aggcagtttcagatttcttcttatgaatataagacgccggaggacgagctttccatagaa
cgctatctcggctccggggcggtgaaaggcgttggcatggcgcttgctgcgcggatcgtg
cggcgctttaagggcgacaccttccgcatcatcgaggaagaaccggagagactggcggag
gtgaagggtatcagtgagcgcaaggcgcgggaaattgcgcagcagatggaggaaaagcgc
gacatgcgaaaggcaatgctttttctgcagcagtacgggatctccaccgcgcttgcaatg
aaaatttacaaccagtatggggcgtctctctaccagatcgtgcgggaaaatccgtacaaa
ctggcagatgatatcgccggcgtcggctttaaggctgccgatgaaattgcatccagagtg
ggtattcataccgactctgattttcgtataaaaagcggacttctgtatgtgctggcgcag
gcgatgacggaggggcatgtgtacctgccgcagccggagctgatgcggcgtgcatcggag
ctgcttggcgtttccctggaggcgatggaggcactgctgccggatctggcaattgagcgg
aaaattgtcataaaggacgtgccgggcgcagggcagggaagcgacggggaggaagtgcgg
gttcccggcgtttacagcgcttccaattattatctggagctgaacacggcgaaaatgctg
catgacctgaatatttcagcggaaatatcagaggaagccgtgcagcgtcgtctggagcag
atcgagcaggagaccgggacaaagctggaagagctgcagaaggaggcggcggcagcggcg
gtgagccacggactgctggtgattacgggaggtcctggcaccggaaaaacaacgaccatc
aacgcgctgattcattattttgcttccgaagggctggagattctgctggcggcgccgacc
gggagagcggcgaagcgcatgacggaagctacgggctatggggcgcagacgattcaccgg
ctgctggaggtatccggcgcggtggaggaatcctcggcgcacacccattttgagcgtaat
atgcagaatcccctggaggcggacgtcattattattgatgaaatgtcgatggtggacatt
tttctgatgcacgcgctgctgagcgcggtcacgccgggcacgcggctgattatggtgggc
gatgtcaatcagcttccgtccgtgggaccgggatgcgtcctgaaagatatcattgaatcg
gagcgctttccggttgtgcgtctgacgaaaatctttcgtcaggcgagcgagagcgacatt
gtggtgaatgcgcacaaaatcaacagcggggagcatgttgtgctggataacaaaagccgt
gactttttcttcttaaagcgcgatgaggcgaatattattatccgtgtggtgctggcgctc
gtccagcagaagcttcccaaatacgtggacgcaaagccatatgatatccaggtgctgacg
ccgatgcgaaagggactgctcggcgtggagaggctgaatacgattctgcagcagtatctg
aatccgcccgctcccgataagcgggagagggagcacgccggcggggtattccgggagggc
gacaaggtcatgcagataaaaaacaactatcaggcggagtgggagatacgcggaaaatac
ggcattgccgtggaaaaaggcgtcggtatctttaacggggacatgggcatcgtccgcgag
atcaatacatatgcggaaatgctgacggtggagttcgacgaggggcgttttgtagactat
tcctttaagcagcttgaagagctggagcttgcgtatgcggtgacgattcataaatcgcag
ggaagcgaatatcccgccgtcgtgattccgctgcttgccgggccgcggatgctgatgaac
cgcaacctgctgtacacggcggtgacaagggcgcgcaaatgcgtgacgctggtcggctcc
gcagaggttttttatcagatgattgacaaccgcttcgagcagaagcgctattctacgctg
aaggagcggatctgcgagtggaatgtataa
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integrated database retrieval system
