Marvinbryantia formatexigens: NQ534_13270
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Entry
NQ534_13270 CDS
T08439
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mfor
Marvinbryantia formatexigens
Pathway
mfor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQ534_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfor03021
]
NQ534_13270
03400 DNA repair and recombination proteins [BR:
mfor03400
]
NQ534_13270
Enzymes [BR:
mfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQ534_13270
Transcription machinery [BR:
mfor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQ534_13270
DNA repair and recombination proteins [BR:
mfor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQ534_13270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
RAD51D_N
PASTA
DUF4332
Motif
Other DBs
NCBI-ProteinID:
UWO23419
LinkDB
All DBs
Position
2826066..2827025
Genome browser
AA seq
319 aa
AA seq
DB search
MFDFNKPRIEIAEISEDRKYGRFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIEG
VLHEFSSIPGVKEDVSEIIMNLKSLAIKNTSKTNEPKVAYIEYDGEGVVTAADIQVDQDI
EILNKDQIIATLSGGPDSKLYMEITITKGRGYISADEGKTPDMPIGVIAVDSIYTPVERV
NMTVENTRVAQATDFDKLTLDVYTNGTLAPDEAVSLAAKVLSEHLSLFIDLSESAKTAEI
MIEKEDNEKEKVLEMNIDELELSVRSYNCLKRAGINTVEELCNRTPEDMMKVRNLGRKSL
EEVLAKLKELGLQLNPSEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattttaacaaaccgagaattgagattgcagaaatctcagaagaccgtaaatat
ggaagatttgtcgtggaaccgctggagagaggttatggcacaacgcttgggaattccctt
cgcagaattatgctttcctccctgccgggtgcagcggtaagccaggtaaagattgagggc
gtattacacgaattcagttctattccgggcgtaaaagaggatgtcagcgaaatcatcatg
aatctgaaatcgctggcgattaaaaataccagtaagacaaatgaaccgaaggtagcatat
atcgagtatgacggagaaggtgttgtgactgcagcggatatccaggtagaccaggatatc
gagattctcaataaagaccagattattgctacactgagcggcggtcctgacagtaagctc
tatatggaaattacaattaccaagggcagaggctatatcagtgcggatgaaggcaagacg
ccggatatgccgatcggtgtaattgcggttgactctatttataccccggtagagcgtgta
aacatgacggtggaaaacacccgtgtggcacaggctacagattttgacaagctgacactg
gatgtatacacaaatggaacccttgctccggacgaggcggtcagccttgcggcaaaggtg
ctcagtgaacatctgagtctgtttattgatttgtccgaaagcgcaaaaacagcggaaatc
atgattgagaaagaggacaatgaaaaagaaaaagttctggaaatgaacatcgacgagctg
gagctgtctgttcgttcctacaactgcctgaagagagcaggcatcaacacggtggaagag
ctgtgcaacagaactccggaggacatgatgaaggtccggaatctgggacgcaaatccctg
gaggaggttcttgcgaaactcaaagaactgggattgcagcttaatccgagtgaggaataa
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