Marvinbryantia formatexigens: NQ534_18705
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Entry
NQ534_18705 CDS
T08439
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mfor
Marvinbryantia formatexigens
Brite
KEGG Orthology (KO) [BR:
mfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfor03009
]
NQ534_18705 (rimO)
Enzymes [BR:
mfor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NQ534_18705 (rimO)
Ribosome biogenesis [BR:
mfor03009
]
Prokaryotic type
ribosomal protein modification factors
NQ534_18705 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UWO27051
LinkDB
All DBs
Position
4008235..4009572
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AA seq
445 aa
AA seq
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MKILFISLGCDKNLVDSEEMLGLLARRGYTMTDDEEQADIIIINTCCFINDAKEESVQTI
LEMAEHRKNGTCRALIVTGCLAQRYREEITTEISEVDAVLGTSSYDEIVETVERVLAGQK
YLHFQELDRLPAPDGGRVVTTGGHYAHLKIAEGCDKHCTYCIIPQIRGNFRSVPMERLLA
QAEELAGGGVRELILVAQETTLYGVDLYGKKSLHLLLQELCKIKGIRWIRILYCYPEEIY
EELIETIRTEKKICHYLDLPIQHASNRILKRMGRRTSREQLAEIIHKLRREIPDIALRTT
LISGFPGETQEDHEELMAFVDEMEFDRLGVFPYSQEEGTPAAAMPDQIPQEIKEARRDEL
MELQQEIVFEKNDAMCGRTVTAMVEGYLTDENVYVARTYADAPGVDGYLFIETQETLMSG
DFVRVRITGALEYDLIGEIEDEFAE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattattcatatcgcttggctgtgacaaaaatctggtagattccgaggaaatg
ctgggacttctcgccagacggggttacaccatgacggacgatgaggagcaggcggatatc
attatcatcaacacctgctgctttatcaatgacgcgaaggaggaaagcgtccagacgatc
ctggaaatggcggagcaccgcaaaaacggaacctgccgggcgctgatcgtcaccggatgc
ctggcacagcgctatagagaggaaatcacgacggaaatcagcgaggtcgacgccgtgctc
ggaacctcctcctacgatgagatcgtggaaacggtggagcgggtgctggcaggtcagaaa
tacctgcatttccaggagctggaccgtctgccggcgccggatggcgggcgtgtggtcacg
accggcggacattatgcgcatctgaagattgcggaggggtgcgacaagcattgtacctac
tgtattattccgcagatacgcgggaatttccgcagcgtgccgatggagcgtctgctggcg
caggcggaggagcttgccggagggggcgtccgggagctgatcctggtggcgcaggagacc
acgctgtacggcgtggatttgtatgggaaaaagagccttcatctgctgcttcaggagctc
tgcaaaattaaggggatacgctggatacggattttatactgttatccggaggaaatctac
gaggaactgatagagactatccgcacggaaaagaaaatctgccactatctcgacctgccg
atccagcatgcgtccaaccggatactgaaacggatgggacggcgtacctccagggagcag
ctggcggaaatcatccataagctgcgccgggagattccagatattgcgctcaggacaacg
ctgatttccggctttccgggagagacgcaggaggaccacgaggagctgatggcgtttgtg
gatgaaatggaatttgaccgtctcggcgtatttccatactcccaggaggagggaacgccg
gctgccgcaatgccggaccagattccccaggagataaaggaagcgcgcagggacgagctg
atggagctgcagcaggagattgtctttgaaaagaacgatgccatgtgcggcagaacggtg
actgcgatggtggaggggtatctcacggatgagaatgtctatgtggcaagaacgtacgcg
gatgcgcccggagtagacggttatctgtttatcgagacgcaggagaccctgatgagcggc
gatttcgtgagggtgcgcattaccggcgcgctggaatacgatttgataggagagatagaa
gatgaatttgccgaataa
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