Marvinbryantia formatexigens: NQ534_20470
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Entry
NQ534_20470 CDS
T08439
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mfor
Marvinbryantia formatexigens
Pathway
mfor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ534_20470 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfor03019
]
NQ534_20470 (rny)
Messenger RNA biogenesis [BR:
mfor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQ534_20470 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
UWO27066
LinkDB
All DBs
Position
complement(4378704..4380200)
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AA seq
498 aa
AA seq
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MSWFAALAYRKNVVEKTIGSAEDKARDIIDDALKVAETKKREALLEAKEESMNRKNELDR
ETKERRAELQKYERRVLSKEEAIDKKSDALEKRETGLTAREEELKRKSVEIEQIHDRKMQ
ELERISGLTSEQAKDYLLKTVEDEVKSDAARLYKELESRAKEEAGKKAKEYVATAIQRCA
ADHVAETTISVVQLPSDEMKGRIIGREGRNIRTLETMTGVDLIIDDTPEAVILSSFDPIR
REVARIALEKLIVDGRIHPARIEEMVEKAQKEVETMIREEGEAAALEVGVHGIHPELIRL
LGRMKFRTSYGQNALKHSVEVAHLAGLLAGEIGLDVRMAKRAGLLHDIGKSIDHEVDGSH
IQIGADLCRKYKESQTVINAVEAHHGDVEPETLIACIVQAADTISAARPGARRETLETYT
NRLKQLEDISNAFKGVDKSFAIQAGREIRVMVVPEKVSDADMVLLARDISKQIEAELEYP
GQIKVSVIRESRAVDYAK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
attagctggtttgctgcgcttgcctaccggaaaaatgtggtagaaaaaacgataggcagc
gcggaagataaagccagggacataatagatgatgcattgaaagtcgcagagacgaaaaag
cgcgaagcactgcttgaagcgaaagaagagtccatgaatcgcaaaaacgagctggaccgg
gaaacaaaagagcgcagagcagagctgcagaagtatgaacggcgcgtattatcaaaggaa
gaagccattgataaaaagtctgatgcactggagaaacgcgagacgggtctgacagccaga
gaagaagagttaaagcgaaaaagtgtcgagattgagcagattcacgacagaaaaatgcag
gaactggagcgaatctcaggtttaacctccgagcaggcaaaagactatctgttaaaaact
gttgaagacgaagtgaaaagcgatgccgccagactttacaaagagctggagagcagagca
aaagaagaagcaggtaagaaagcaaaggaatatgtagcgactgcgattcagcgttgtgcg
gctgaccatgttgcagaaactacaatttccgtggtgcagctcccaagtgatgagatgaag
ggacggattatcggacgtgaaggacgaaatatccgtacactcgaaacgatgacaggcgtc
gaccttattatcgacgatacaccggaagcggtaattctgtccagctttgaccctatcaga
agagaagtggccagaattgcactggaaaagctgattgtggacggacgtattcatccggcc
agaatcgaagaaatggttgagaaagcacaaaaagaagtagaaacaatgattcgcgaggaa
ggcgaagcagcagctttagaggtaggggtacatggaatccacccggagctgatacgtctg
ctgggcagaatgaaattccgcaccagctatggtcagaacgcactcaagcattctgtagag
gttgcgcatctggcaggcttattggcaggggaaatcggtttggacgttcgcatggcgaaa
cgtgccggtttattgcatgacattggcaaatccatcgaccatgaagtggacggctcccat
atacagattggggcagacctctgtagaaaatacaaagagtcgcagaccgtcatcaatgca
gtggaagcccatcatggcgatgtagaaccagaaaccttaattgcatgtattgtgcaggcg
gcagacacaatttcggctgcgcgcccgggtgcaagaagagaaacactggaaacatatacc
aacagattaaaacagttagaggatatttcaaatgccttcaaaggcgttgacaaatcgttt
gctattcaggcaggtagagagattcgagttatggttgttcctgagaaagtcagtgatgcg
gacatggtattgctggcaagggatatttcaaaacagattgaagctgaactggaatatccg
ggacagattaaagtcagcgtaatccgcgaatcacgcgcggtagattacgcaaagtaa
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