Alexandromys fortis (reed vole): 126486562
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Entry
126486562 CDS
T08493
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126486562
09122 Translation
03013 Nucleocytoplasmic transport
126486562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126486562
03041 Spliceosome [BR:
mfot03041
]
126486562
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126486562
Spliceosome [BR:
mfot03041
]
Complex C
Other components
EJC/TREX
126486562
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126486562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
126486562
NCBI-ProteinID:
XP_049974801
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MAAATVLVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASSVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEYK
REIVEAKQIVRKLTMVVLSTEKLDERDKEKDKDDEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITVEPLYRRVGVPKGAKGLPVSALQNKLAPKQ
VESFDDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNGHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISNWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTTEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVNKICQEEKEKRPDLYALAMGYWGLLKCRKSHMIPENEFHHKDPPPRNAVASV
QNGPGGGTSSSSLGSASKSDESGTEETDKPRERSQCGTKAVNKASGTTPKGNSSNGNSGS
NSNKAVKENDKEKVKEKEKEKKEKTPATTPEARVLGKDNKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTTIPSIESKSTQEREREKEPSRERDVSKEMKSKENVK
GGEKTPVSGSLKSPVPRSDLSEPEREQKRRKIDTHPSPSHSSTVKVTDILPKVPLGSENY
ASSPVISIHFLQDSLIDLKESSAKLYINHTPPPLSKSKEREMDKKDLDKSRERSREREKK
DEKDRKERKRDHSNNDREVPPDITKRRKEENGTMGVSKHKSESPCESQYPNEKDKEKNKS
KSSGKEKGSSDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHKSSDKH
R
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtgctggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttacatttatgccggatcctcagtgaaaacaaaagccacgacagttcg
acctatagagattttcaacaagctctctatgagttgtcatatcacgtcattaaaggaaat
ttaaagcatgaacaggcatctagcgttcttaatgacattagtgaatttcgtgaggatatg
ccttctattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctgaaggaacgtttggatccagaaactttggaatcattagggctcatcaaacag
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttattaagagaagagaatgaaggttatgccaaactgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatattagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtaattttagaagtatttgaatgc
aggccagagcacgatgacttctttatatctttattagaatcttacatgagcatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaagtggt
gagacaccgtcatctttgtacagagttgcagcagtgcttctgcaatttaatctcattgat
ttagatgatctttatgtacacctccttccagctgataattgcattatggatgaatacaaa
cgagaaattgtggaagctaaacaaattgtaagaaaactcacaatggttgtattgtctact
gagaaacttgatgaacgagacaaagaaaaggacaaggatgatgagaaagtagaaaagcca
cctgacaaccagaagcttggtttgttggaagccttgttaaagatcggggattggcagcat
gcacagaacatcatggatcagatgcctccatactatgcagcttcacataaactaatagct
ctagctatttgcaagcttattcacataactgttgaacctctataccgaagagttggtgtt
cctaaaggtgctaaaggcttacctgttagtgctttgcaaaacaagttagcaccaaagcaa
gtggagagctttgacgatttgaggagggatgtattcaacatgttctgttaccttggtcct
cacttatctcacgatcccattttatttgcaaaagtcgtgcgcataggcaagtcatttatg
aaagagtttcagtcagatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aacgcttgcatgtctgaggaactatgggggatgtttaaaacatttccctatcagcataga
taccgtctatatggccagtggaagaatgaaacttataatggtcacccacttttagtaaaa
gttaaggctcaaacaatagacagagccaagtatatcatgaagcgtctaaccaaggaaaat
gtgaagccttcaggaagacaaattggcaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaaatatgataacttgataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgttttggcctattgtattattgaagcttta
gctaatccagaaaaggagaagatgaagcatgatgacacaaccatctcaaactggcttcag
agtctggctagtttctgtggtgcagtgtttcgtaaataccccattgatcttgctggtctt
cttcagtatgtagccaatcaattaaaggcaggcaaaagttttgacctactaatattgaaa
gaagtggtacaaaaaatggcaggaatcgaaattacagaggaaatgacaacagagcaatta
gaggccatgactggtggggagcaactaaaggctgagggtggttattttggccagatcaga
aacactaaaaaatcttctcagagattaaaggatgcactattggaccatgatcttgctctt
ccactctgtttacttatggctcagcagaggaatggagtaatttttcaggagggtggagag
aaacacttgaaacttgttggaaagctctatgaccagtgtcatgatactctagtacagttt
ggtgggtttttagcatctaatctgagtacagaagattacataaagcgagtgccttcaatt
gacgtgctctgtaatgagtttcatacacctcacgatgcagcattttttctgtctaggcca
atgtatgcacaccatatttcgtcaaaatacgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagtccataaatacattacatcatgtgagatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgatatcagccctcagttc
tatgctacattttggtcattgacaatgtatgaccttgcagttccacataccagctatgaa
agagaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgttgcacggcccttcaggacaaacttcttgaa
gaagaaaagaagcagatggaacatgttcagagagtcctccagagattgaaattggaaaaa
gacaactggcttttagcaaagtcaaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgcattttttcagcaatagatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgaccgagtt
ttttctgacataatttacacagttgcaagctgtactgaaaatgaagctagtcggtatggg
agatttctctgctgcatgttagagacggtgaccaggtggcatagtgatagagccacgtat
gaaaaggaatgtggaaattatccaggatttcttactatattacgggcaactggatttgat
ggtggaaataaagctgatcaattagattatgaaaattttcgacatgttgtacataagtgg
cattacaaattaaccaaggcatcggtgcattgccttgagacaggcgaatatactcacatc
aggaatatactgattgtgctaacaaaaatacttccttggtacccaaaagttctgaatctg
ggtcaggctttggaaagaagagtgaacaaaatatgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactgggggctgttgaaatgtagaaagtctcacatg
atacctgaaaatgaatttcatcacaaagatcctcctccaaggaatgctgttgcgagtgta
caaaatgggcctggtggtgggacttcatcatcatccctaggaagtgcgtctaaatcggat
gaaagtggtactgaggagactgataaaccaagggagagatctcaatgtggtacaaaagct
gttaataaggcttctggtaccacaccaaaagggaattcaagcaatggaaatagtggctct
aacagcaacaaagctgttaaggaaaatgacaaagaaaaagtaaaagagaaagaaaaagag
aaaaaagaaaagactccagctacaactccagaggccagggtacttggtaaagataataaa
gaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagacaaaggaaaga
acacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagcaaaagatgag
aaattcaagaccaccattcccagcatagaatcaaaatctactcaagaaagagaaagagaa
aaggagccatccagagaaagagatgtatcgaaggaaatgaagtcaaaggaaaatgttaaa
ggaggagaaaaaacaccagtttcagggtccttgaagtcacctgttcccagatcagatctc
tcagagcctgaaagggaacaaaaacgccgcaaaattgatacccatccttctccatcacat
tcctccacagtaaaggttacagacatacttcccaaagttcctctgggttctgagaactat
gccagctcacctgtcatctccattcattttctacaggacagtctcatcgatctcaaggaa
tcttcagcaaagctctacattaatcatactcctccaccactgtccaagagtaaggagaga
gaaatggacaagaaagatttggacaagtcaagggaaagatccagagaaagagagaaaaaa
gatgaaaaggacaggaaagagcggaaaagggatcactcaaacaatgaccgtgaagtgcca
ccggacataacaaagaggcggaaagaggaaaatggaacaatgggggtttcaaaacacaaa
agtgagagtccatgtgaatctcaatatccaaatgagaaagacaaagaaaaaaataagtca
aaatcttcaggcaaagaaaaaggcagtagtgattcgtttaaatctgagaagatggataaa
atctcctctggtggcaaaaaggaatccaggcatgataaagaaaagatagaaaagaaagag
aaacgggatagttcaggaggaaaggaagagaagaaacatcataagtcctctgacaagcac
agataa
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integrated database retrieval system
