Alexandromys fortis (reed vole): 126486973
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Entry
126486973 CDS
T08493
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04142
Lysosome
mfot04144
Endocytosis
mfot04721
Synaptic vesicle cycle
mfot04961
Endocrine and other factor-regulated calcium reabsorption
mfot05016
Huntington disease
mfot05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126486973
04142 Lysosome
126486973
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
126486973
09156 Nervous system
04721 Synaptic vesicle cycle
126486973
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
126486973
09164 Neurodegenerative disease
05016 Huntington disease
126486973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mfot04131
]
126486973
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfot04147
]
126486973
Membrane trafficking [BR:
mfot04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
126486973
Exosome [BR:
mfot04147
]
Exosomal proteins
Proteins found in most exosomes
126486973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
126486973
NCBI-ProteinID:
XP_049975479
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccctgactatggagtcagataaattcatctgcatt
agagaaaaagtaggagaacaggcccaggtggtaatcattgatatgaatgatccgagcaat
ccaattcgaagacccatctcagcagacagtgccatcatgaatcctgccagcaaagtgatt
gccctgaaagctgcaaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcacataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgtcacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgtcattctagcctcgcaggatgccagattatcaattaccgtacagatgca
aagcagaagtggttgcttctgactggtatatctgcacagcaaaatcgtgtggttggagct
atgcagctctattctgtagataggaaagtgtctcagcctattgaaggacatgcagctagc
tttgcacaatttaagatggaaggaaatgcagaagaatcaacgttgttttgttttgctgtg
cggggtcaggcaggagggaagttgcatatcattgaagttggtacaccacccacagggaac
cagccctttccaaagaaggcggtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagataagtgaaaagcatgatgtcgtgttcttgattaccaagtatggt
tatatccacctctatgaccttgagactggcacgtgcatctacatgaacagaatcagtgga
gaaacgatcttcgttactgcccctcatgaagccacagctggaataataggagtcaacaga
aagggacaagttctgtcagtttgtgtagaagaagaaaacataattccttacatcaccaat
gtcctacaaaatcctgatttggcccttagaatggctgtgcggaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctcttttcgcccagggaaactactcagaggct
gcaaaggtggccgctaatgcaccaaagggaatccttcgtactccagacaccatccgtcga
ttccagagtgtcccagctcagccaggtcaaacttcacctctacttcagtactttggaatc
cttttggaccagggccagctaaacaaatacgaatccttagaattgtgtagacctgtactt
cagcaagggcggaaacaacttttggagaagtggttgaaagaagataagctggaatgttct
gaagaactgggtgatcttgtaaagtctgtggacccaacgttggcacttagtgtgtacctc
agggccaatgtcccaaataaagtcatccagtgctttgcagagacaggtcaagtccagaag
attgttttatatgctaaaaaagttggttatactccagactggatctttctcctgagaaac
gtcatgcgcatcagtcccgatcagggacagcagtttgctcagatgctagttcaggacgaa
gagccacttgctgatatcacacagattgtggatgtctttatggaatacaatctaatccag
caatgtactgccttcttacttgacgctttgaagaacaatcgcccctccgaaggtccttta
cagacacgattgcttgagatgaaccttatgcacgcacctcaagttgcagatgctattctg
gggaatcagatgttcacccactatgaccgggctcatatcgcccagctgtgtgaaaaggca
ggcctacttcagcgtgcattagaacacttcaccgatttgtatgatataaaacgagcagtt
gttcatacccatcttcttaacccggagtggttagtgaattactttggatccttatccgtt
gaagactccctagaatgtctcagagctatgctgtctgctaatattcgtcaaaatctacag
atctgtgttcaagtggcttctaagtatcatgaacaactatcaactcagtctctgattgaa
ctctttgaatcattcaagagttttgaaggtctcttttattttctggggtccattgttaac
tttagtcaggacccagatgtgcactttaaatacattcaggcggcttgcaagactggacag
atcaaagaagtggaaagaatctgcagagaaagcaactgctacgatcctgagcgcgtcaag
aactttctcaaggaggcaaaactaacagatcagttgccacttatcatcgtctgtgatcgg
tttgactttgtccatgacctggtgctgtatttatatagaaacaatctccaaaaatatata
gagatatatgttcagaaggtaaatccaagtcgactccctgtggttattggagggttgctt
gatgttgactgctctgaagatgtcattaaaaatttgattcttgttgtgagaggtcaattc
tctactgatgagcttgttgctgaagtggaaaagagaaacagattgaagctgcttctgcct
tggcttgaggccagaattcatgagggctgtgaggagcctgctactcacaatgcattagcc
aaaatatacatcgacagtaataacaacccagagagatttcttcgtgaaaacccctattat
gacagtcgtgttgttggaaagtattgtgagaagagagacccacatctggcttgtgtcgct
tatgaacgtggtcagtgtgacctggaactcatcaatgtttgtaatgagaattccctcttc
aaaagcctttcccgctacctggtccgtcgaaaagatccagaattgtggggtagtgtgcta
ctggaaagtaatccatacagaagaccactaattgaccaggttgtacagacagccttgtct
gaaactcaggacccagaagaagtgtcagtaactgtgaaggcttttatgacagcagatctt
cctaatgaactcattgaactgctggagaaaattgtacttgataactctgtattcagtgaa
cacaggaatctgcaaaatctcctcatcctcactgcaattaaggctgatcggacacgtgtt
atggagtatattaaccgcctggataattatgatgctccagatattgctaacattgccatc
agcaatgaactgtttgaagaagcatttgctattttccggaagtttgatgtcaatacttca
gcagttcaggtcttaattgaacatattggaaacctggatcgtgcatatgagtttgctgaa
cgctgcaatgagcctgctgtttggagtcaacttgcaaaagctcagttgcagaaaggaatg
gtgaaggaagccattgattcctacatcaaagctgatgatccttcatcctacatggaagtt
gttcaggctgccaacaccagtggaaactgggaagaactggtgaagtatttgcagatggcg
cgaaagaaggctcgagagtcctatgtggagacagaattgatatttgcgctggctaaaaca
aaccgccttgcagaattagaagagttcatcaatgggccaaataacgctcatattcagcaa
gttggtgaccgttgctatgatgaaaaaatgtacgatgctgcaaagctgttgtacaataat
gtttctaactttggacgcttggcatctacccttgttcaccttggtgaatatcaggcagca
gttgatggtgctagaaaagctaatagtacccggacctggaaggaggtctgctttgcctgt
gtagatgggaaagagttccgtcttgctcagatgtgtggacttcatattgtagtacatgca
gatgagttagaggaacttatcaactactatcaggaccgtggatacttcgaagaactcatc
accatgttggaagcagccttgggactggagcgagctcacatgggaatgtttactgaacta
gctattctgtattctaaattcaagccacagaaaatgagggaacacctggagttgttctgg
tcaagagtgaatattcctaaggtgctgagagctgcagaacaagctcatctttgggcagag
ctggtgttcctgtatgacaagtatgaagaatatgataatgctataatcaccatgatgaat
catcccaccgatgcatggaaggaagggcagttcaaggatatcatcaccaaggtggccaat
gtggaactctactacagagcaatccagttctacttagaattcaagcctctgttgttaaat
gacttgctcatggtgctgtctccacggttggatcacactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttgcgctccgtccagaaccacaacaac
aagtctgtaaatgaatcactgaacaacctctttattacagaagaagattaccaggctctg
cgaacatcaatagatgcttatgacaactttgacaatatctcacttgctcagcgtttggaa
aaacatgaactcattgaattcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagcgtagagctttgcaagaaagacagcctttacaaggacgcaatgcagtat
gcctctgaatctaaagatacagaattggctgaagaactcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggggcttgtctctttacctgttatgatctcttaaggccagat
gtcgtcctggaaactgcatggaggcacaatatcatggatttcgccatgccctatttcatc
caggttatgaaggaatatttgaccaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagagtcattgagaaaagaagaagaacaagctacagagacacagcccatcgtt
tatggtcagccccagctgatgctcacagcaggacccagtgtggcagtccctccccaggca
ccttttggttatggttacactgcaccaccatatgggcagccacagcctggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
