Alexandromys fortis (reed vole): 126487040
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Entry
126487040 CDS
T08493
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126487040
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mfot01001
]
126487040
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126487040
03036 Chromosome and associated proteins [BR:
mfot03036
]
126487040
Enzymes [BR:
mfot01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
126487040
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
126487040
Protein kinases [BR:
mfot01001
]
Serine/threonine kinases: Other
TAF1 family
126487040
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126487040
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
126487040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Opi1
Motif
Other DBs
NCBI-GeneID:
126487040
NCBI-ProteinID:
XP_049975607
LinkDB
All DBs
Position
Unknown
AA seq
1890 aa
AA seq
DB search
MGPGWASLLPTAGAGQPAAMSDTDSDEDSSGGGPFSLTGFLFGNINGAGQLEGESVLDDE
CKKHLAGLGALGLGSLITELTANEELTAAEGTLVTDEGWIQSREDAVDYSDINEVAEDES
RRYQQTMGSLQPLCHSDYDEDDYDADCEDIDCKLMPPPPPPPGPLKKEKDQDGITGVSED
GEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEAAQAESKDGKLTLPLAGIMQHDAT
KLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEEEC
SAELEVNQKSLWSYDYAPPPPPEHCLSDDEITMMAPVESKFSQSAGDTDKVMDTKPRVAE
WRYGPARLWYDMLGVSEDGSGFDYGFKMRKTEHEPTVKCKMMTKLKKLEESNSIDLLADE
NFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDD
DKPWYSIFPIDNEDLVYGRWEDNIIWDAQAMPRILEPPVLTLDPNDENLILEIPDEKEEA
TSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGL
RGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLL
KHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKI
KNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPES
DFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKD
RPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMV
SPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIA
AMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSL
KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE
RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSRE
REEQERKELQRMLLAAGSAATGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYV
RCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEK
EKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQE
EELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGT
TVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKI
ITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEK
LKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDY
YKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGSESQYTKTAQEIVNVC
YQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQPPDLYDNSIPLSVSR
DTSVYQDESNMSVLDIPGATSEKQLTQEGEEGDGDLADEEEGTVQQPQASVLYEDLLMSE
GEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVESGTLRPKQPRVLQETTRMGMENEESMM
SYEGDGGEASRGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEQRSGPS
VLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggggccaggctgggcttcgctgctgcccacagccggtgccggccagcctgctgccatg
tcagacacagacagcgatgaagattcctccggaggaggcccattttctttaaccgggttc
ctcttcggcaacatcaacggagccgggcagctggagggcgaaagcgtcttggacgatgag
tgtaagaaacaccttgccggcctgggggctttgggtctgggcagcctcataactgaactc
acggcaaatgaagaactgactgcagctgagggtaccctggtaaccgatgaaggctggatt
cagagtagagaagatgctgtggactactcggacatcaatgaggtggcagaagatgaaagc
cgaagatatcagcagacgatggggagcttgcaacctctttgtcactcggattatgatgaa
gatgactatgatgctgattgtgaagatattgattgtaagttgatgcctcccccacctcca
ccgccaggaccactgaagaaagagaaggaccaagatggtattactggtgtgtctgaagat
ggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaagtg
gacttcagtagttcctctgactcagaatctgagatgggacctcaggaagcagcacaggca
gaatctaaggatggaaagctgactcttccattggctgggattatgcagcatgatgccacc
aagttgttgccaagtgtcacagaactttttccagaatttaggcctggaaaggtgttacgc
tttttacgtctttttggaccagggaagaatgtcccatctgtttggagaagtgctcggaga
aagaggaaaaagaagcaccgtgagcttatacaggaagagcagatccaggaggaggagtgc
tcagcagaactagaagtcaaccagaaatctctgtggagctatgactatgctccacctcca
cctccagagcattgtctctctgatgatgaaatcacaatgatggctcctgtagaatccaag
ttttcccagtcagctggagacacagataaagtgatggataccaaaccaagagtggcagaa
tggcgttatggacctgctcggctgtggtacgatatgctaggtgtctctgaagatggcagt
gggtttgactatggcttcaaaatgaggaagactgaacatgaacccacagtaaaatgcaaa
atgatgacgaaattaaagaaacttgaggaaagcaatagcattgatcttctggcagatgaa
aacttcctaatggtgacacaactgcattgggaagatgatatcatctgggatggggaagat
gtcaaacacaaaggaacaaaacctcagcgtgcaagtttggcaggctggcttccttccagt
atgactagaaatgctatggcctacaatgttcagcaaggttttgcagccacactagatgat
gataaaccttggtattccattttccccattgataatgaagatctggtatatggacgttgg
gaggacaatatcatttgggatgcccaagccatgccccggattttggagcctcctgttttg
acacttgatcccaatgatgagaacttgattttggagatccccgatgagaaggaagaagct
acttctaattctccttccaaggagaataagaaagaatcatctctgaagaagagtcgaatt
ctcttaggaaaaacaggagtcatcaaggaagaaccacagcagaacatgtctcagccagaa
gtgaaagatccatggaatctctccaatgatgaatattactatcccaaacaacagggtctt
cgaggtactttcggagggaatattatccagcattcaattccagcagtagaattacggcaa
cccttctttcccacccatatgggacccatcaaactccggcagttccatcgaccacctcta
aaaaagtactcctttggggcactatcgcagccaggtccacactcagtccagcccttgctg
aagcacatcaaaaagaaggcaaagatgagagagcaggagaggcaagcctctggtggtgga
gagatgttttttatgcgcacccctcaggacctcacaggcaaagatggagaccttattctt
gcagaatacagtgaggaaaatggaccgttaatgatgcaagttggcatggcaaccaagata
aaaaactactataaacggaaacctggaaaagatcctggtgccccagattgcaaatatgga
gaaactgtttattgccatacatctcctttcctgggttctcttcatcctggacaattactg
caggcatttgagaacaatctttttcgtgctccaatttatcttcataagatgccagagagt
gacttcttgatcattcgaacaaggcagggttactatattcgagaattagtggacattttt
gtggtgggccagcagtgtcccttgtttgaagtgcctggtcctaactccaaaagggccaat
acacacatccgagactttctgcaggtttttatttaccggctcttttggaagagtaaagat
aggccacggcggatcaggatggaagatataaagaaagcctttccttcacattcagaaagc
agcatccggaagaggctaaagctctgtgccgacttcaaacgtacaggaatggattcaaac
tggtgggtgttgaagtctgattttcgtttaccaacggaagaggagatcagagctatggta
tcaccagaacagtgctgcgcttattatagcatgatagctgcagagcagagactaaaggat
gctggctatggagaaaagtcgttttttgctcctgaagaagaaaatgaagaagatttccag
atgaagattgatgatgaagttcgtactgctccttggaatactacgagagctttcattgct
gccatgaagggtaaatgtctcctggaggtgactggagtagcagatcccacaggctgtggt
gaaggattctcctatgtgaagattccaaacaaaccaactcagcagaaggatgataaggag
cctcagccagtgaaaaagacagtcacaggaacagatgcagaccttcgtcgcctgtctctg
aaaaatgccaaacaacttcttcgtaaatttggtgtgcctgaggaagagattaaaaagttg
tcccgctgggaagttattgatgtggtccgtacaatgtcaacagaacaggctcgctctgga
gaggggcctatgagtaaatttgcccgtggatcaaggttttctgtagctgagcatcaagag
cgttacaaagaggaatgtcagcgtatctttgacctacagaacaaggttttgtcatcaact
gaagtcttatcaactgacacagacagcagctcagctgaagacagtgactttgaagaaatg
ggaaagaacattgagaacatgctgcaaaacaagaaaacgagctctcagctgtctcgtgaa
cgggaggagcaggagcggaaggaactacaacggatgctactggcagcaggctcagcagcc
acaggaaataatcacagagatgatgacacagcttcggtgactagccttaactcttctgcc
actggccgctgtctcaagatttatagaacatttcgagatgaagaggggaaggagtatgtt
cgttgtgagacagtccgaaaaccagctgttattgatgcttatgtgcgcatacgtaccaca
aaagatgaggaattcattcgaaaatttgccctttttgatgagcaacatagagaagagatg
cgaaaagaacggcggaggattcaagagcaactgagaagacttaaacgaaaccaggaaaag
gagaagctaaagggccctcctgagaaaaagcccaaaaaaatgaaggagcgccctgaccta
aaactgaaatgtggagcatgtggtgccatcgggcacatgaggacaaacaaattctgcccc
ctttattatcaaacaaatgctccaccttctaatcctgttgccatgacagaggaacaggag
gaagagctagaaaagacagtcattcataatgataatgaagaacttatcaaggttgaaggg
accaagatcgttttggggaaacagctaattgagagtgccgatgaggttcgcagaaaatct
ctggtcctgaagtttcccaaacaacaacttcctcccaagaaaaaacgtcgggttggaacc
actgttcactgtgactatttgaatagacctcataaatccatccatcggcgccggacagac
cctatggtaacactgtcatctatcttggagtctatcatcaatgatatgagagatcttcca
aatacataccctttccatacgccagttaatgcaaaggttgtaaaggactactataaaatc
atcactcggccaatggatctacagacactccgtgaaaacgtgcgcaaacgcctctatcca
tctcgggaagaattcagagagcatttggaactaattgtgaaaaatagtgcaacctataat
gggccaaaacactcactgactcagatttctcaatccatgctggatctctgtgatgaaaaa
ctcaaagagaaagaagataagttggcacgtttagagaaagctatcaaccccttacttgat
gatgatgaccaagtagcgttttcttttattctggataacattgtcactcagaaaatgatg
gcagttccagattcttggccatttcatcacccagttaataagaagtttgttccagattat
tataaagtcattgtcagtccgatggatttggagactatacgtaagaatatctccaagcac
aaataccagagtcgagagagcttcctagatgatgtaaaccttattctggccaacagtgtt
aagtacaatgggtctgagagtcagtatactaagactgctcaggagattgtgaatgtttgt
taccagacattaacagagtatgatgaacatttgactcaacttgagaaagatatttgtaca
gctaaagaagcagctctggaggaagcagaattagaaagcctggacccaatgactccagga
ccttacacacctcagcctcctgatttgtatgataacagcataccactcagtgtttctcga
gatacctctgtatatcaagatgagagcaatatgtctgtcttggatattcccggtgctact
tcagaaaagcagctaacacaggaaggtgaagaaggagatggtgatcttgcagatgaagag
gaaggaactgtacaacagcctcaggccagtgttctgtatgaagatttgcttatgtctgaa
ggagaagatgatgaggaagatgctgggagtgatgaagaaggagataaccctttttctgct
attcagctaagtgaaagtggaagtgactctgatgtggaatctggcactttaagacccaaa
cagccccgtgtgcttcaagagactacaaggatgggcatggaaaatgaagaaagcatgatg
tcctatgagggagatggtggagaagcttcccgtggtttggaggatagcaacatcagttat
gggagctatgaagaacctgatcccaagtcgaacacccaggatacaagcttcagcagcatc
ggtgggtatgaggtatcagaggaggaagaagatgaggaagagcagcgctctgggcccagc
gtgctaagccaggtccacctgtctgaggacgaggaggacagtgaggatttccactccatt
gctggagacagtgacttagactctgatgaatga
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integrated database retrieval system
