Alexandromys fortis (reed vole): 126488040
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Entry
126488040 CDS
T08493
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04020
Calcium signaling pathway
mfot04024
cAMP signaling pathway
mfot04080
Neuroactive ligand-receptor interaction
mfot04082
Neuroactive ligand signaling
mfot04713
Circadian entrainment
mfot04720
Long-term potentiation
mfot04724
Glutamatergic synapse
mfot05010
Alzheimer disease
mfot05014
Amyotrophic lateral sclerosis
mfot05017
Spinocerebellar ataxia
mfot05020
Prion disease
mfot05022
Pathways of neurodegeneration - multiple diseases
mfot05030
Cocaine addiction
mfot05031
Amphetamine addiction
mfot05033
Nicotine addiction
mfot05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
126488040
04024 cAMP signaling pathway
126488040
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
126488040
04082 Neuroactive ligand signaling
126488040
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
126488040
04720 Long-term potentiation
126488040
09159 Environmental adaptation
04713 Circadian entrainment
126488040
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126488040
05014 Amyotrophic lateral sclerosis
126488040
05017 Spinocerebellar ataxia
126488040
05020 Prion disease
126488040
05022 Pathways of neurodegeneration - multiple diseases
126488040
09165 Substance dependence
05030 Cocaine addiction
126488040
05031 Amphetamine addiction
126488040
05033 Nicotine addiction
126488040
05034 Alcoholism
126488040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126488040
Ion channels [BR:
mfot04040
]
Ligand-gated channels
Glutamate (ionotropic)
126488040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
SH3_YKFC_2nd
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
126488040
NCBI-ProteinID:
XP_049977159
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MRGAGGPRGPRGPAKMLLLLALACASPFPEEAPGPGAAGGGTGGARPLNVALVFSGPAYA
AEAARLGPAVAAAVRSPGLDVRPVALVLNGSDPRSLVLQLCDLLSGLRVHGVVFEDDSRA
PAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEEYD
WTSFVAVTTRAPGHRAFLSYIEVLTDGSMVGWEHRGALTLDPGAGEAVLGAQLRSVSAQI
RLLFCAREEAEPVFRAAEEAGLTGPGYVWFMVGPQLAGGGGSGLPGEPLLLPGGAPLPAG
LFAVRSAGWRDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRAQNRTHRGESLHRY
FMNITWDNRDYSFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYGRFL
QPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRTQLNRTHSPPPDAPRPEKRC
CKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTIN
EERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI
FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA
FFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKNIR
SNYPDMHSYMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKV
FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKLDID
NMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTHRMDFLLAFSRGMYSCCSAEAAP
PPAKPPPPPQPLPSPAYPTARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAALADGFHR
YYGPIEPQGLGLGEARAAPRGAAGRPLSPPATQPPQKPPPSYFAIVRDQEAAEPPAGAFP
GFPSPPAPPAAAAAAVGPPLCRLAFEDESPPAPTRWPRSDPESQPLLGGGAGGPSAGAPS
APPPRRAAPPPCAYLDLEPSPSDSEDSESLGGASLGGLEPWWFADFPYPYTERLGPPPGR
YWSVDKLGGWRAGSWDYLPPRSGPAWHCRHCASLELLPPPRHLSCSHDGLDGGWWAPPPP
PWAAGPPPRRRARCGCPRPHPHRPRASHRAPAAPHHHRHRRAAGGWDIPPPAPTSRSLED
LSSCPRAAPSRRLTGPSRHARRCPHAAHWGPQLPPAPHRRHRGGDLGTRRGSAHFSSLES
EV
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgccggtggcccccgcggccctcggggccccgctaagatgctgctgctgctg
gcgctggcgtgcgccagcccgttcccggaggaggcgccggggccgggcgcggccggcggg
ggcacgggcggggcgcggccgctcaacgtggcgctggtcttctccggccccgcgtacgcg
gccgaggcggcgcgcctgggcccggccgtggcggcggcagttcgcagcccgggcctggac
gtgcggccagtggcgctggtgctcaacggctcggaccctcgcagccttgtgctgcagctc
tgcgacctgctgtcggggctgcgcgtgcacggcgtggtgttcgaggacgactcgcgcgcg
cccgccgtcgcgcccattctcgacttcctgtcggcgcagacttcgctgcccatcgtggcc
gtgcacggcggcgccgcgctcgtgctcacgcccaaggagaagggctccaccttcctgcag
ctcggctcctctacagagcagcagctgcaggtcatttttgaggtgctggaggagtacgac
tggacatcctttgtggcagtaaccacgcgtgccccaggccatcgggccttcttgtcatac
atcgaggtgctgactgatggcagcatggtaggctgggagcatcgaggagcgctgacactg
gaccccggggctggtgaagccgtcctgggcgcacagctccggagtgtcagcgcgcagatc
cgcctgctcttctgtgcccgcgaggaggcagagcctgttttccgggcagcagaagaggct
ggcctcactgggcctggctacgtctggttcatggtgggacctcagctggctggaggcggg
ggctccgggctccctggggaaccccttcttctgccaggaggtgccccactgcctgcgggg
ctatttgcagtgcgctctgctggctggcgtgacgacttggcacgtcgagtggctgctggt
gtggcggtggtggccagaggtgcccaagccctgctgcgagactatggcttcctgcctgaa
ctgggtcatgactgccgcgcccagaatcgcacccaccgtggggagagtctgcacaggtac
ttcatgaacatcacctgggataaccgagactactccttcaatgaagacggctttctggtg
aacccttcactggtggtcatctccctcaccagggacaggacatgggaagtggtgggcagc
tgggaacaacagaccctccgcctcaagtacccgctatggtcccgctatggccgcttcctg
cagccagtggatgacacacagcacctcaccgtggccacactggaggagagaccctttgtc
attgtggagccagcggaccccatcagcggcacttgcattagagactcagtcccctgccgg
acccagctcaaccgtacccacagtcctccgcctgacgctccccgcccggagaagcggtgc
tgcaagggcttctgcattgacattctgaagaggctggcgcacaccattggcttcagctat
gacctctacctggtcaccaatggcaagcatggcaagaagatcgatggagtctggaacggc
atgattggtgaggtgttctatcagcgtgcggacatggccatcggctctcttaccatcaat
gaggagcggtccgagatcgtggacttctccgtcccctttgtagagacaggcatcagcgtc
atggtggcacgcagcaatggcactgtgtccccctctgccttcctcgagccctacagcccc
gctgtgtgggtgatgatgttcgtcatgtgcctcaccgtggttgccgtcaccgttttcatc
tttgagtacctcagtcctgtaggctataaccgcagcctggccacgggcaaacgccctggt
ggctcaaccttcaccattgggaaatccatctggctgctgtgggccctggtgttcaacaac
tcggtgccagtggagaatccgcggggcaccaccagcaagatcatggttctggtgtgggcc
ttcttcgccgtcatcttcctcgccagctacacagccaatctggctgccttcatgatccag
gaggagtatgtggacaccgtgtctgggctcagtgaccgaaagttccagaggccccaggag
caatacccacccctgaagtttgggacggtgcccaacgggtctacagagaagaacatccgc
agcaactaccctgacatgcacagttacatggtgcgctacaaccagccgcgagtggaggag
gctctcacgcagctcaaggcagggaaactggacgccttcatctacgatgcggcagtgctc
aactacatggcccgcaaggatgagggctgcaagctggtcaccatcggctcgggcaaggtc
ttcgctaccaccggttatggcatcgcccttcacaagggctcccgctggaagcgacccatc
gacctggcgctgctgcagttcctgggggacgatgagattgagatgctggaacggctgtgg
ctttccgggatctgccataatgacaaaatcgaggtgatgagcagcaagctggatatcgat
aacatggcaggtgtcttctacatgctcctggtggccatgggcctttccttgctggtcttc
gcctgggaacatctggtgtactggcgcttgcggcattgcctggggcctacccaccgcatg
gatttcctgctggccttctccaggggcatgtacagctgctgcagcgccgaggcggctcca
ccgcctgccaagcctccgcccccaccgcagccgctacccagccccgcataccccaccgcg
cgcccgcccccaggccctgcacccttcgtgccccgagagcgagcagccgccgaccgctgg
cgcagggccaagggcaccgggcctccgggaggcgcagcgctggccgacggcttccaccga
tactacggtcccattgagccgcaggggctgggcctcggcgaggcgcgcgcggcacccagg
ggcgcggccggacgccctctgtccccacccgccacacagcccccgcagaagccaccaccg
tcctacttcgccatcgtgcgcgaccaggaggcggccgagccccccgccggagccttcccc
ggcttcccatccccgcctgcgccgcccgccgccgcagctgccgccgtcggaccgccactg
tgccgcctggctttcgaggacgagagtccgcctgcgcccacgcgctggccgcgttccgac
cccgagagccagccgctgttgggtgggggcgcgggcggcccgagcgcgggggccccaagc
gccccgccgccgcgccgcgccgcgcccccaccgtgcgcctacctggacctcgagccgtcg
ccttcggactccgaggactcggagagcctgggcggagcgtcgctcggcggcctggagccc
tggtggttcgccgatttcccgtacccgtacaccgagcgcctcgggccaccgcccggccgc
tactggtcggtcgacaagctcgggggctggcgcgccggcagctgggactacctgcccccg
cgcagcggccccgcgtggcactgccgccactgcgccagcctggagctgctaccgccgccg
cgccacctcagctgctcgcacgacggcctcgacggcggctggtgggcgcctccgccgcca
ccctgggctgctgggccaccacccaggcgccgggcacgctgtgggtgtccacgcccgcac
cctcaccgcccgcgggcctcgcaccgtgcgcccgctgcgccgcaccaccaccgacaccgg
cgcgcggcaggcggctgggacatcccgccgcccgcgcccacctcgcgttcgctcgaggac
ctgagctcctgtccgcgggcggccccctcacgcaggctcaccgggccctcacgccacgcg
cgccgctgcccgcatgctgcgcactgggggccgcagctgccccccgcaccgcaccggaga
caccggggcggggacctgggcacgcgcagaggctctgcgcacttctccagtctggagtcc
gaggtatga
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