Alexandromys fortis (reed vole): 126488361
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Entry
126488361 CDS
T08493
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04151
PI3K-Akt signaling pathway
mfot04510
Focal adhesion
mfot04512
ECM-receptor interaction
mfot04518
Integrin signaling
mfot05165
Human papillomavirus infection
mfot05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126488361
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126488361
04518 Integrin signaling
126488361
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126488361
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
126488361
09172 Infectious disease: viral
05165 Human papillomavirus infection
126488361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mfot00536
]
126488361
Glycosaminoglycan binding proteins [BR:
mfot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126488361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Fn3_VIN3
DUF7949
EGF
EGF_PEAR1L
NDNF
DUF4998
hEGF
FN3_Tor_3rd
fn3_2
Motif
Other DBs
NCBI-GeneID:
126488361
NCBI-ProteinID:
XP_049977742
LinkDB
All DBs
Position
Unknown
AA seq
2110 aa
AA seq
DB search
MGAMTWLLPGIFLASLALTSEGGVLKKVIRHKRQSGVNMTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESPNGEKDLTPMPESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELEMLVSSLREQCTMGTGCCLQPAEGRLDTRPFCSGRGNFSAEGCGCVCEPGW
KGPNCSEPECPGNCNLRGQCLDGQCVCDEGFTGEDCSQLACPNDCNDQGRCVNGVCVCFE
GYAGVDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAGDDCNEPLCLNNCYNRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFTGEDCGELTCPNNCQGRGQCEEGQ
CVCDEGFAGADCSEKRCPADCHHRGRCFNGRCECDDGFTGADCGDLKCPNGCSGHGRCVN
GQCVCDEGYTGEDCSQQRCPNDCHNRGRCVQGKCICEQGLKGFDCSEMSCPNDCHGHGRC
MNGMCVCDDDYTGEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPNDCHGHG
RCVNGQCICQEGFTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPGDCNN
QGQCVSGRCICNEGYTGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDHTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLRF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEEEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKKVTTTRLDAPSQIEVRDVTDTTALVTWFKPLAEIDGIELSYGIK
DVPGDRTTIDLTHEENQYSIGNLRPDTEYEVSLVSRRVDMASNPAKETFTTGLDAPKNLR
RVSQTDNSITLEWRNVKADINSYRIKYAPISGGDHAEADVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKGDKESDPATINAATEIDAPKDLQVSETSQDSLTLFWKTPLAKFDRYRLNYS
LPTGQSKEVQLPKDATSHVLTDLEPGQEYSVLLTAEKGRHKSKPAHVKASTEQTPSLQNL
TVTETGWDALRLNWTTDDLAYEYFVIQVQEANKVEATHNFTVLGNLRAADIPGLKAATHF
RVSIYGVAQGSKTPVLSAEASTGRTPNLGEVSVSEVGWDALRLNWTAPEGAYQNFFIQVL
EADMVQSVQNLTVPGGLRSVDLPGLKAATRYRISIQGLTQDSSTNPLSVEVLTEELPQLG
GLSVTEVGWDGLTLNWTTDDLAYKHFVIQVQEANNVEATQNLTVPGSLRAVEIPGLKADT
PYRVSIYGVLQSYRTPVLSAETSTAKEPQIGNLNVSGVTHESFDLSWTATDGIFDMFAIE
IIDSNRLQQTTERNISGADRTAHISGLPPSTDFIVYLSGIAPSIRTKTISTTATTEALPL
LENLTISDTNPYGFTVTWTASENAFDSFVVTVVDSGKLLDPQEFTLSGTQRKLELRGLIT
GIGYEVLVSGFTQGHQTKPLRADAVTEAELEVDNLLVSDATPGGFRLSWTADEGIFDSFV
LRIRDTKRQSEPQEITLSSPERTRDITGLREATEYEIELYGISGGRRSQPVSTIATTAMG
SPKEITFSDITDNAATVSWKAPTAPVESFRITYVPMTGGAPSMVMVDGTDTETRLVKLTP
GVEYHVSIIAIKGFEESDPVSGSLTTALDGPSGLQTANITDSEALAMWQPAIATVDSYVI
SYTGERVPEVTRTVSGNTVEYELQDLEPATEYTLRIFAEKGHQKSSAVTTKFTTDLDSPR
DLTATEVQSETALLTWRPPRASITGYLLVYESLDGTVKEVIVGPDTTSYSLADLSPSTHY
TVRIQALSGSLRSKLIQTIFTTIGLLYPFPRDCSQAMLNGDTTSGLYTIYINGDKTQALD
VYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYE
LRVDLQDHGESAFAVYDRFSVGDAKSRYKLKVEGYSGTAGDSMNYHNGRSFSTYDKDTDS
AITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSNF
RNLEGRRKRA
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgggggccatgacctggctcttgccaggcatctttctagcttcgctagccctcacttct
gaaggtggggtcctcaaaaaagtcatccggcacaagcgacagagtggagtgaacatgacc
ctgccagaggagaaccagccagtggtgttcaaccacgtctacaacatcaagttgcccgtg
ggctctcagtgttcagtggatctggagtcaccgaatggggagaaagacctgacccccatg
ccagagtccagtggaagcttccaggaacacacagtggatggagaaaatcagattgtgttc
acacaccgcatcaacatcccccgccgggcctgtggctgtgccgcagctcctgatgtgaag
gaactcctgagcaggctggaggagctagagatgctggtatcgtctctaagggagcagtgc
accatgggtactggctgttgtctccaacctgcagaaggccgtctggacaccaggcccttt
tgcagtggccgaggcaacttcagtgctgaaggatgtggctgtgtttgtgaaccaggctgg
aaaggccccaactgctctgagcctgaatgtcctggaaactgtaacctccgaggccagtgc
ctcgatggacagtgtgtctgtgacgagggcttcactggtgaagactgcagccagctggcc
tgccccaatgactgcaatgaccagggcaggtgtgtgaatggagtctgtgtgtgctttgaa
ggctatgccggggtggactgtggcctggaagtctgcccagtgccctgcagtgaggagcac
gggatgtgtgtggatggtaggtgtgtgtgcaaagatggctttgctggtgacgactgcaac
gaacccctgtgtctcaacaactgctacaaccgtgggcggtgcgtggagaacgagtgcgtg
tgtgacgagggcttcacgggtgaagactgcagtgagctcatctgccccaatgactgcttc
gaccgcggccgctgtgtcaatggcacctgctactgtgaggaaggcttcacgggcgaagac
tgtggtgagctcacctgccccaacaactgccagggccgtggccagtgcgaggagggacag
tgtgtttgcgacgagggctttgctggtgcggactgcagtgagaagcggtgtcccgccgat
tgtcaccaccgtggccgctgcttcaatgggcggtgcgagtgtgacgatgggttcacgggg
gctgactgcggggatctgaagtgtcccaatggctgcagtgggcatggccgctgtgtcaat
gggcagtgtgtgtgtgacgagggatacactggcgaagactgcagccagcagcggtgtccc
aatgactgccacaaccggggacgctgtgtgcagggcaagtgcatctgtgaacaaggactc
aagggttttgactgcagtgagatgagctgccccaatgactgccatggccatggccgctgc
atgaatggcatgtgcgtctgtgacgatgactatactggggaagactgcagagaccggcgc
tgtccccgggactgcagccagcggggccgctgtgtggatggacaatgcatatgtgaggat
ggcttcactggccctgactgtgctgagctctcgtgccccaacgactgccatggccacggc
cgctgtgtaaatggccagtgcatctgccaagagggcttcactggcaaagactgcaaagag
caaaggtgccccagcgactgccacggccaaggccgctgtgaggacggccagtgcatctgc
catgaaggcttcacaggactggactgtgggcagcgctcctgcccaggggactgtaacaac
cagggacaatgtgtttcaggccgctgcatctgcaatgaagggtacacaggggaagactgc
tctgaagtatcccctcccaaagacctcattgtgacagaggtaacagaagagactgtaaac
ctggcatgggacaatgagatgcgggtcaccgagtacctgattatgtatacacccacccat
gctgatggtctggagatgcaattccgcgtgcctggggaccatacttccaccaccatccgg
gagcttgagccaggagtggaatacttcatccgtgtgttcgccatcttagagaacaagagg
agcatccctgtcagcgccagggttgccacttacttgcctgcacctgaaggactaagattc
aagtctatcaaggagacatctgtggaagtggagtgggatcctctagacattgctttcgaa
acatgggagatcatcttccggaatatgaataaagaagatgaggaggaaattaccaaaagc
ttaaggcgaccagagacctcttaccggcaaactggccttgctcctgggcaagaatacgaa
atatctctgcacattgtgaaaaacaacacccgaggccctggcttgaaaaaagtgaccaca
acccgcctggatgctcccagtcagatcgaggtgagagacgtcacagacaccacagccctg
gtcacctggttcaagcctctggctgagattgatggcatcgagctctcctatggcatcaag
gacgtgcctggagaccgcaccaccatcgacctcacacacgaagaaaaccagtattctatt
gggaacctgcggcctgacaccgagtatgaggtgtcccttgtctcccgcagggtggacatg
gcaagcaaccctgccaaggagaccttcaccacaggcctggatgcacccaagaaccttcgc
cgtgtctcccagacagacaacagcatcaccttggagtggaggaacgtcaaggccgacatc
aatagttacagaattaaatacgcacctatctcaggaggtgaccatgctgaggctgatgtt
cccaagagccagcaagccacaaccaaaaccacactcacaggtctgaggccaggaactgaa
tatggcattggcgtttctgctgtgaagggagacaaggagagtgacccggcaaccatcaat
gcagccacagaaattgatgcacccaaggacttgcaggtgtctgaaacctcacaggacagt
ctgactctattctggaaaacaccactggctaagtttgacagataccgcctcaactacagc
ctccccacaggccagtcaaaagaggtccaattgccaaaggatgccacctcccatgtcctg
acagatctggagccagggcaagaatactctgtccttctcactgccgagaagggcagacac
aagagcaagcctgcgcatgtgaaggcttccacggaacaaacaccttccctgcaaaatctc
accgtgactgagaccggctgggatgccctcagactcaactggacaacagatgacctggcc
tatgagtactttgtcattcaggtgcaggaagccaacaaggtggaggcaactcacaacttc
acagtgcttggcaacctccgggctgcagacatcccgggtctcaaggctgccactcatttt
agagtctccatctatggggtagcccagggctctaaaacaccagtgctctctgccgaggcc
tccacagggagaactcccaatctgggagaggtctcagtctcggaggtgggctgggatgcc
ctcaggctcaactggacggccccagaaggggcctatcagaactttttcattcaggtgcta
gaggctgacatggtccagagtgtccaaaacctcacagtccctggaggactgaggtcagtg
gacctgcctgggctcaaagcagccactcgctaccggatcagcatccaagggctcactcag
gactccagcacaaaccctctctctgttgaagtcttgacagaggagctccctcagctggga
ggcttatccgtgaccgaggtcggctgggatggcctcacactcaactggaccacagatgac
ctggcctataagcactttgttattcaggtgcaggaggccaacaatgtggaggctactcag
aatctcacagtacccggtagcctccgggctgtggaaatcccaggcctcaaggctgacact
ccttatagagtctccatctatggggtgctccagagctatagaacaccagtgctctctgct
gagacttccacagccaaagaacctcaaattggaaacttaaatgtttctggcgtaactcat
gagagcttcgatctctcctggacagcgaccgacgggatcttcgacatgtttgctattgaa
attattgattccaataggttgcagcaaacgacagaacgtaatatatctggtgctgaccga
actgcccacatctcagggctcccccctagtactgatttcattgtctacctctctggaatt
gctcccagcatccggaccaaaaccatcagtaccacagccaccacagaggccttgcccctt
ctggaaaacttaaccatttccgacactaatccctacgggttcacagttacctggacggca
tcggagaatgcctttgacagctttgtagtaacggtggtggattctgggaagctgctggac
ccccaggaattcacactttcaggaacccagaggaagctggagcttagaggcctcataact
ggtattggctatgaggtcctggtctctggcttcacccaagggcaccaaaccaagcccttg
agggctgatgctgttacagaagctgaactggaagttgacaaccttctagtttcagatgcc
actccaggtggtttccgtctgtcctggactgctgatgaagggatattcgacagttttgtt
ctcaggatcagagacaccaaaaggcaatccgaaccacaagaaataaccctctcttccccc
gaacgtaccagggacataacaggtctcagagaggccacagagtacgaaattgaactctat
ggaataagcggtggaaggcgatcccagccagtcagtaccatagcaacaacagccatgggt
tctccgaaggaaatcactttctcagacatcactgacaatgcagccacggtcagctggaag
gcacccactgccccggtggagagcttccggattacctacgtgcctatgacaggaggtgcc
ccctccatggtgatggtggatggaactgatactgagacacgtttggtgaagctcacccct
ggagtggaataccatgtcagcattattgccataaagggctttgaagaaagtgatcctgtc
tcagggtcactaaccacagctctggatggtccatctggcctgcagacagcaaacatcaca
gactcagaagccttggccatgtggcagccagccatcgcaaccgtggacagttatgtcatc
tcctatacaggagagagagtgccagaagttacacgcacagtgtctgggaacacggtggaa
tatgagctacaggacctggagcctgccacagagtacacactgaggatctttgcagaaaaa
ggccaccagaagagttctgccgtcactaccaagttcaccacagaccttgattccccaaga
gacttgactgctactgaggttcaatcggaaactgccctcctcacctggagacctccccgg
gcatcaatcactggttacctcctggtctatgaatctctggatggcacagtcaaggaagtc
attgtgggaccagataccacctcctacagcctggcagacctgagtccctccacccactac
acagtgaggatccaagcattgagtggatccctaaggagcaagctgatccaaaccatcttt
accacaattggactcctgtacccattccccagggactgctctcaagcaatgttgaatggc
gacaccacctctggtctctacaccatctatataaatggtgataagactcaagcactggat
gtctactgtgatatgacctcggatggaggtggatggattgttttcctgagacgcaaaaat
ggacgtgaggacttctatcgaaactggaaggcttatgctgctgggtttggggaccgcaga
gaagaattctggcttggactggataacctgagcaaaatcacagcccaagggcagtatgag
ctccgagtggacctacaagaccatggggagtcagcctttgcagtgtatgacagattcagt
gtgggagatgccaagagtcgctacaagctgaaggtcgaaggatacagtggaacggcaggg
gactccatgaactatcacaatggcagatccttctccacctatgacaaggacacagactca
gccatcaccaactgtgctctgtcctacaaaggagctttctggtataagaactgtcatcgt
gtcaatctgatgggcagatacggggacaataaccacagtcagggtgttaactggttccat
tggaagggccatgagtactcaatccagtttgctgagatgaagctgagacccagcaacttc
cgaaatctcgaaggcaggcggaagcgagcataa
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integrated database retrieval system