Alexandromys fortis (reed vole): 126488652
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Entry
126488652 CDS
T08493
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04151
PI3K-Akt signaling pathway
mfot04510
Focal adhesion
mfot04512
ECM-receptor interaction
mfot05145
Toxoplasmosis
mfot05146
Amoebiasis
mfot05165
Human papillomavirus infection
mfot05200
Pathways in cancer
mfot05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126488652
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126488652
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126488652
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126488652
09162 Cancer: specific types
05222 Small cell lung cancer
126488652
09172 Infectious disease: viral
05165 Human papillomavirus infection
126488652
09174 Infectious disease: parasitic
05146 Amoebiasis
126488652
05145 Toxoplasmosis
126488652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
ATG17_like
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
126488652
NCBI-ProteinID:
XP_049978226
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MDEPLSSLSTFAFPPLYLSRKEDTKKRQAASLPRPPSPAVSPRLKGLDMGLLQVFAFGVL
ALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLTVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSRDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGIDEEVEGMVHGHCMCRHNTKGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDGCQHNTMGR
NCEQCKPFYYQHPERDIRDPSLCEPCTCDPAGSENGGICDSYTDFSVGLIAGQCRCKLHV
EGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ
CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSENSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVVVVERQYIQDRVPSWTGPGFVQVPEGAYLEFFIDNIPYSMEYDI
LIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELSQYTASGNDVENPYTLIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCSLQGSVNAFCDAVTGQCHCFQGIYARQCD
RCLPGYWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPITFQLACVCDPGYIGPRCDECASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQHGYYGDALRQDCRKCVCNS
LGTVKEHCNGSDCHCDKATGQCSCLPNVIGQNCDQCAPNTWQLASGTGCEPCDCNAAHSF
GPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIGELTNRTHKFLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDVLAQSPAAEPLKNIGNLFEEAEKLTKDVTEKMSQVEVKLS
DTASQSNGTAGQLDALQAEAKSLDKTVKELAEQLEFIKNSDIQGALDSITKYFQISLEAE
KRVNASTTDPNSTVEQSALTRDRVEDLMLEQESQFKEKQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQIRDFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
ILLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEAAIKQADEDIQGTQNLLTSIES
ETAASEESLTNASQRISKLERNVEELKRKAAQNSGEAEYIEKVVYSVKQSADDVKKALDG
ELDEKYKKVESLIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLLEALERKYEDNQK
YLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacccctctcctctctctcaacatttgcctttccccccctctacctctccaga
aaggaagacacgaaaaaaaggcaggcagcttccctaccgcgccctccctccccggctgtg
tcccctcggctgaagggactggacatggggctgctccaggtgttcgccttcggtgttcta
gccctgtggggtacccgagtgtgtgctcaggaaccagagttcagttacggctgtgcagaa
ggcagctgctaccctgccactggcgaccttcttatcggccgagctcaaaagctcacagtg
acctcaacgtgcggactgcacaaaccagagccctattgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgtgattcccgggatccttatcatgagaccctcaatcctgac
agccatctcattgaaaatgtggttaccacatttgctccgaaccgccttaagatttggtgg
caatctgaaaatggtgtggagaatgtaactatccaactggatctagaagcagaattccat
ttcactcatctcataatgacttttaagacattccgtccagctgctatgctgatagagcgg
tcttctgactttgggaagacttggggtgtgtacagatacttcgcctatgactgtgagagc
tcattcccaggcatttcgactggccccatgaagaaagtggatgacatcatctgtgactct
cgatattctgatattgagccctcaacagaaggagaggtgatatttcgtgctttagaccct
gcttttaagatagaagatccttatagtccaaggatacagaatctattaaaaatcaccaac
ttgagaataaagtttgtgaaactgcacactttgggagataatcttttggactctagaatg
gaaatcagagagaaatactattatgcggtttatgatatggtggttcgtgggaactgcttc
tgctatggccatgccagcgaatgtgcccctgtggatggaattgatgaagaggtggaagga
atggttcatggacactgcatgtgcaggcacaacaccaaaggcttgaactgtgagctgtgc
atggatttctaccatgatttgccatggagacctgctgaaggtcgaaacagcaatgcctgc
aaaaaatgcaactgcaacgaacattccagctcatgtcactttgacatggcggtcttcctg
gccactgggaacgtcagcgggggagtgtgtgatggctgtcagcacaacaccatgggacgc
aactgtgaacagtgcaaaccattctactaccagcaccctgagagggacatccgagacccc
agtctttgtgaaccatgtacctgtgacccagctggttctgaaaatggaggaatctgtgac
agttacactgatttttctgtgggtctcattgctggtcagtgtcggtgcaaattgcacgtg
gaaggagagcgttgtgatgtttgtaaagaaggcttctatgatttaagcgctgaagaccca
tttggttgtaaatcatgtgcttgcaatcctctggggacaattcctggtgggaatccttgt
gattctgagactgggtactgctactgtaagcgactggtgacaggacagcgctgtgaccaa
tgtctgccacaacactggggcttaagtaacgatttggatggatgtcgaccttgtgactgt
gaccttggaggagcactgaacaatagctgttcagagaactccggccagtgctcctgcctg
cctcatatgattgggaggcagtgcaatgaggtggaatctggttactatttcaccaccctg
gaccactacatctacgaagccgaggaagccaatctggggcctggagtcgttgtggtggaa
cggcagtacattcaggaccgggttccttcctggacaggacctggcttcgtccaagtgcct
gagggggcttatctggagtttttcattgacaatataccatattccatggagtatgatatc
ctaattcgctatgagccacagctgccggaccactgggagaaagctgtcatcaccgtacag
cgacctggaaagattccaaccagcagccgatgtggtaacactgttcctgatgatgacaac
caggtggtgtctttgtcaccaggctcaagatacgtcgtcctccctcgcccagtgtgcttt
gagaagggaatgaactatacagtgaggttggagctgtcccagtacacagcatctggcaat
gatgtggagaacccctacacgctcattgactcactggttctcatgccctactgtaaatcc
cttgacatcttcactgttggaggctcaggagatggggaggtcaccaacagtgcctgggaa
accttccagaggtaccggtgtctggagaacagccggagtgtagtaaaaacaccgatgaca
gatgtctgcagaaacatcatcttcagcatttctgccttgattcaccagacaggtctcgct
tgtgaatgtgaccctcagggttctctaagctctgtgtgtgaccccaacggaggtcagtgt
cagtgccggcctaatgtggttggaagaacatgcaacaggtgtgcaccaggcacctttggc
ttcggccccaacggatgcaaaccttgtgactgcagcctgcaaggatctgtgaatgctttc
tgcgatgctgtcacgggccagtgccactgtttccagggcatatatgctcggcagtgtgac
cgatgtctccctgggtattggggctttcccagctgccagccctgccaatgtaacggtcat
gctgaagactgcgacacggtgacaggggagtgtctgagctgtcaggactacaccactggc
cacaactgtgaaaggtgcctggctggttactatggtgatcccatcattgggtccggagac
cactgccgcccttgcccttgcccagatggtcctgacagtggacgccagtttgccaggagc
tgttatcaggaccccattactttccagcttgcatgtgtctgtgatcctggttacattggc
cccagatgtgatgagtgtgcctctgggtttttcggcaatccctcagattttggggggtca
tgtcagccttgtcagtgtcaccacaacattgatactaccgatccagaagcttgtgacaag
gagacaggaaggtgcctcaagtgcttgtaccacacagaaggggaccattgccagctctgc
cagcatggatactacggtgacgctcttcggcaggactgtagaaagtgtgtctgcaattcc
ttgggcaccgtgaaggagcactgtaatggctctgactgccactgtgacaaagccactggt
caatgctcatgccttcccaatgtgatcggtcagaactgtgatcagtgtgcgcccaatacc
tggcagctggccagtgggaccggctgtgagccgtgcgattgcaatgctgcacattccttt
gggccatcctgcaatgagttcaccgggcagtgccagtgcatgccgggctttggaggccgt
acctgcagcgagtgccaggagctcttctggggagaccctgatgtggaatgccgagcctgt
gattgtgatcccaggggtattgagacaccacagtgtgaccagtccacaggccagtgtgtc
tgtgtggagggtgttgagggtccacgctgtgacaagtgcacccgagggtactcgggggtc
ttccctgactgcacaccctgccaccagtgctttgctctctgggatgtgatcattggtgag
ctgaccaacaggacccacaaattcctggagaaagccaaagctttgaaaatcagtggtgtg
attggtccataccgggagactgtagactctgtagagaagaaagtcaatgagataaaagac
gtcctggcccagagcccagcggcagaaccactgaaaaacattggcaatctctttgaggaa
gcagagaaattaaccaaagatgttacagaaaagatgagtcaagtagaagtgaaattatct
gatacagcttcacagagcaatggcacagctggacagctagatgcactgcaggcagaggca
aagagccttgacaagactgtgaaagaactggctgagcagctggaattcatcaaaaactcc
gatattcagggtgccttggatagtatcaccaagtatttccagatctctctcgaggcagaa
aagagagtgaatgcctccaccacagatcccaacagcacagtggagcagtcagcactcacc
cgagacagagtggaagatttgatgttggagcaagagtcccagttcaaggaaaaacaagag
gaacaggcacgccttctggacgaacttgccggcaaactgcagagtctagatctgtcagct
gctgctgagatgacctgtggaacgcctccaggggctgattgttctgaaagtgaatgtgga
ggacccaactgcagaactgatgaaggagagaagaagtgtggggggcctggatgtggtggt
ctggtcactgtggcccatagcgcctggcagaaagccatggattttgaccgtgatgttctg
agtgccctggctgaagtggaacagctctccaaaatggtctctgaagcaaaagtaagagca
gatgaagctaagcagaatgctcaggatgtcctgttgaaaacaaatgctaccaaagaaaaa
gtggacaagagcaatgaggacctgaggaacctcatcaagcagatcagagacttcctgact
gaggatagtgctgatctggacagtattgaagcagttgctaatgaagtactgaaaatggaa
atgcctagcactccacagcagttacagaacctgacagaagacattcgggaacgagttgaa
accctttctcaagtagaagttattttgcagcagagtgctgctgacattgccagagctgag
atattgctggaagaagcaaaaagagcaagcaaaagtgcaacagatgtcaaagtcactgca
gacatggtgaaggaagcgttagaagaggctgaaaaagcccagattgcagcagaggcggcc
atcaaacaagctgatgaggatatccagggaacccaaaacctgctgacatcgattgaatct
gaaactgcagcctctgaggaaagcctgaccaacgcctcccaacgcatcagcaagcttgag
aggaatgtggaagagcttaagcgcaaagctgcccagaattctggggaagcggaatatatt
gaaaaagtagtatatagtgtaaagcagagtgcagacgatgttaaaaaggctctagatggc
gaactcgatgagaagtacaagaaggtagagagtttaattgcccaaaaaactgaggagtca
gcagatgccaggaggaaagctgagctgctacaaaatgaagcaaaaacactcttggctcaa
gccaacagcaagctccagctgctggaagccttagaaaggaaatatgaagacaatcaaaaa
tacttagaagataaagctcaggaattagtacgactggaaggagaggtccgttcactcctt
aaggacataagcgaaaaggttgctgtttatagcacctgcttataa
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integrated database retrieval system
