Alexandromys fortis (reed vole): 126488828
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Entry
126488828 CDS
T08493
Name
(RefSeq) short transient receptor potential channel 2 isoform X1
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126488828
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126488828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
126488828
NCBI-ProteinID:
XP_049978508
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MYTASDQNIIVQLRFSGKSEGGSKSKAKTAPTSDRKRQWCPGHRTVSHLYRLLQHRDSSL
TCRHLWRELPTPASLSLLVLLDDVGAPQPSWTEIVNKKLRFPPTLLGAIQEGQLGLVQQL
LEAGADASGAGPGGPLRNVEESEDRSWREALNLAIRLGHEAITDVLLANIKFDFRQVHEA
LLVAVDTNQPAVVRRLLARLDREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQK
DLYEIAQLLMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLA
SEDAMLAAFQLSRELKRLARKEPEFKPQYIGLESLCQDYGFELLGMCRNQSEVTAVLNDL
GEDSETEPEAEGLGQAFEEGIPNLARLRLAVNYNQKQFVAHPICQQVLSSIWCGNLAGWR
GSTTIWKLFVAFLIFLTMPFLCIGYWLAPKSRLGRLLKVPVLKFLLHSASYLWFLIFLLG
ESLVMETQLSTFKGRSQSVWETSLHMIWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVI
LSLYLASFALRLLLAGLAYMHCQEASDSATCHYFTAAERSEWRTEDPQFLAEVLFAVTSM
LSFTRLAYILPAHESLGTLQISIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETEQ
LGNFNETFQFLFWTMFGMEEHNVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMIT
NSFQKIEDDADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAAFYLVRRIFWFVCCCS
SCCKAKNSDYPAIPTFTNPGAREGPGEGERERGSYRLRVIKALVQRYIETARREFEETRR
KDLGTRLTELTKTVSRLQSEVVSVQKTLAAGGAPRPPDGASILSRYITRVRNSFQNLGPP
TPETPAELTMPGIVETEVSLGAGLDAIGEEETPASGESSHASPAHVLVHREQEAEGAGDL
PLEEGLETKGES
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtacactgcatctgatcaaaatatcattgtccaactcaggttctcaggcaaatcggaa
gggggcagtaagagcaaggcaaagacagcaccgacctcagaccggaaacgacagtggtgt
ccaggccaccggacagtgtcccatttgtacaggctccttcagcatcgagactcttccctt
acatgccgccacttgtggagagagctccccaccccagccagcctctccctcctcgtcctc
ctcgatgacgtcggtgctccacagcccagctggactgagattgtgaacaaaaagctcagg
ttcccacccacgctcctgggtgccatccaggaggggcagctgggtctcgtgcagcagctg
ctggaggccggcgccgacgcctcgggtgctgggccaggcgggcctctgcggaatgtggaa
gagtccgaggaccgctcctggagggaagccctcaacctggccatccgcctgggccatgag
gccatcaccgacgtgctgctcgccaacatcaagtttgacttccggcaggtccacgaagcc
ctgcttgtggcagtggacacaaaccagccagcggtggtgcgtcgcctactagctcggctg
gaccgggagaagggccgaaaggtagacaccaagtctttctcactagctttctttgactcg
tcgatcgacggctcccgctttgcgcctggtgtgacccctcttacactggcctgccagaag
gacctgtatgagattgcccagctgcttatggaccagggccacactatcgctcggccccac
ccggtttcctgcgcctgtcttgagtgcagcaatgcccgccgatacgacctgttaaagttc
tctttgtcccgaatcaacacctaccgtggcattgcaagccgggctcacctctcactggcc
agtgaggatgccatgctggctgcctttcagctcagccgggagctcaagcgccttgcacgg
aaggagcctgagtttaagcctcagtacattggcctggagtcgctctgccaggactatggc
tttgaactgctgggcatgtgccggaatcagagcgaggtcactgcggtgctcaatgacctg
ggtgaggacagtgagactgagcctgaggccgagggcctgggccaggcctttgaggagggc
atccccaacctggcaagattgcggttggctgtcaactacaaccagaaacagtttgtagca
caccccatctgccagcaagttctgtcttccatctggtgtgggaacctggctggctggcgt
ggaagcaccaccatctggaagctcttcgttgcctttctcatcttcctcaccatgcccttc
ctctgcattggctactggctggcgcccaagtcccggctcggccgcctgctgaaggtccca
gtgctgaagttcctgctgcactctgcctcctatctgtggtttctcatattcctgctggga
gagtccctggtcatggagactcagctgagcaccttcaaaggccgcagccagagtgtctgg
gagacttcactacacatgatttgggtcacgggcttcctgtggtttgagtgtaaggaggtg
tggatcgagggcttgcgcagttacctcctggactggtggaatttcctggatgtagtcatc
ctgtcgctgtacttggcatcctttgccctgcgcctcctgctggctgggctggcctacatg
cactgccaagaagcttccgacagcgctacctgccactacttcactgctgctgagcggagt
gagtggcgcacagaggacccccagttcctggccgaggtgctcttcgctgtcaccagcatg
ctgagcttcacccggctggcatatatcctgccagctcacgagtcactgggcactctgcag
atctccattggcaggatgatcgacgacatgatccggttcatgttcatcctcatgatcatc
ctgactgcctttctctgtggcctcaacaacatttatgtgccgtaccaggagacggagcag
ctgggcaatttcaatgaaacgttccagtttctattctggaccatgtttggcatggaggaa
cacaatgtggtggacatgcctcagttcctggtgcctgagttcgtgggccgcgccctgtac
ggcatctttaccatcgtcatggtcatcgtactgctcaacatgctcattgccatgatcacc
aactccttccagaaaatcgaggatgacgctgatgtggagtggaagttcgctcgctccaag
ctctacctgtcctacttccgagagggcttgacgctgcctgtgcccttcaacatcctgccc
tccccgaaggctgccttctacctcgtcaggagaattttctggttcgtttgctgttgctcc
tcctgctgcaaagccaaaaattcggactaccccgccatccctacctttaccaaccctggg
gcaagggaagggcccggagaaggggagcgtgagcgcgggtcttaccgccttcgcgtcatc
aaggctctggtgcagcgctatatcgagactgcccggcgggagttcgaggagacccgcaga
aaagacctgggcaccagactgacagagctcaccaagactgtgtctcgactgcaaagcgag
gtggtcagtgtgcagaagactctggcagctggtggggcaccacggcctccggatggtgcc
agcatcctcagtcgctacatcacccgcgtgcgcaacagcttccagaatctgggtcccccc
acccctgagaccccagcagagctgaccatgccagggattgtggaaactgaagtctcttta
ggagctggtcttgatgctataggagaggaggagactccagcatcgggagagtccagccac
gcctcccctgctcacgtgttggtgcacagggaacaagaagcagagggggcaggggacctg
cccctggaggaaggtctggagaccaagggcgagtcctaa
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