Alexandromys fortis (reed vole): 126488995
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Entry
126488995 CDS
T08493
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126488995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126488995
03110 Chaperones and folding catalysts [BR:
mfot03110
]
126488995
04121 Ubiquitin system [BR:
mfot04121
]
126488995
Enzymes [BR:
mfot01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
126488995
Spliceosome [BR:
mfot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126488995
Complex C
U4/U6.U5 tri-SnRNP related factors
126488995
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
126488995
Chaperones and folding catalysts [BR:
mfot03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
126488995
Ubiquitin system [BR:
mfot04121
]
Ubiquitin ligases (E3)
U-box type E3
126488995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
V-set_CD47
FOXO_KIX_bdg
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
126488995
NCBI-ProteinID:
XP_049978899
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MAAGSQISHGQVFAAYLLTTVGARFKGLRPSQESKESSGMDSSPGRRRVWKRLGLSLQPF
VYPVCTPEGVVFDLLNIVPWLKKYGTNPSNGEKLDGKSLIKLNFAKNSEGQYHCPVLYSV
FTDNTHIVAIRTTGNVYTYEAVEQLNIKAKNLRDLLTDEPFSRQDIITLQDPTNLDKFNV
SNFFHVKNNMKVIDPDEEKAKQDPSYYLKNTNAETRETLQELYKEFKGDEILAATMKAPE
KKKVDQLNAAHYSTGKVSASFTSTAMVPETTHEAAVIDEDILRYQFVKKKGYVRLHTNKG
DLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKP
FKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTA
MENVESDPKTDRPKEEIRICATTVFVDPYEEADAQIAQERKKTQQQVVPEAKVKTSQPQP
GSQGPQTYRQGVGKYINPAATKRAAEEEPSTSTAVPMAKKKPSWGFGDFSSW
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggaagccagatatcacacggacaagttttcgccgcttaccttttgaccact
gtaggtgctagatttaaaggcttgagaccatcacaagaaagcaaggaaagcagcggcatg
gactcttcgccaggcagacgccgcgtgtggaaacgattaggtctctccctgcagcctttt
gtctacccggtctgcactccagaaggtgtcgtctttgatttgctgaacattgttccgtgg
cttaagaagtatgggaccaatcccagcaatggagagaaacttgatgggaagtccttgatc
aagctgaactttgcaaagaacagtgaagggcagtaccactgtccagtgctgtactcggtg
ttcactgacaacactcatattgtggctatcaggacaactggcaatgtctatacctatgag
gcagtggagcagctaaacatcaaggccaagaacctgagggacttactgactgatgagccc
ttttccaggcaagacatcatcaccctgcaggaccccaccaacctggacaaattcaatgtt
tccaacttcttccatgtgaagaataacatgaaagtcatagatccagatgaggaaaaggcc
aaacaggatccatcttattacttgaaaaatacgaatgctgagacccgagagacactacag
gagctctacaaagagttcaaaggagatgagattttagcagccaccatgaaggcacctgag
aagaagaaggtggaccaactgaatgctgcccactattccacaggaaaggtcagtgcgtcc
ttcacctccactgccatggtacccgagaccacgcatgaagcagctgtcattgacgaggat
attctacgctaccagtttgtgaagaagaagggctatgtgaggctgcacaccaacaagggc
gaccttaacctagagctgcactgtgacctgacaccaaaaacttgtgaaaacttcatcaag
ctctgcaagaaacagtattatgatggcaccatctttcataggtccatcaggaactttgtg
atccagggcggtgaccccacaggtacaggcacaggtggagaatcctactggggcaagcct
ttcaaagatgagttccgccccaacctctcccacacaggccgtggggtgctcagcatggcc
aactcggggcccaacaccaacaagtctcagttcttcatcacgttccgctcctgtgcttac
ctggataagaagcacaccatcttcggacgggttgttgggggttttgacacgctgacagct
atggagaatgtggagagtgaccccaaaactgaccgtcctaaggaggaaatacgcatatgt
gcaaccacggtgtttgtggacccctatgaggaggctgatgcccagattgcccaggagcgg
aagaagacacagcaacaagtggttccagaggccaaggtcaagacgagccagccccagcct
ggaagccagggcccccagacataccgccagggggtgggcaagtacatcaacccagcagcc
acgaagcgagcagcggaggaagaaccatcaaccagcacagctgtccccatggccaagaag
aagcccagctggggctttggggacttcagttcctggtag
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