Alexandromys fortis (reed vole): 126489059
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Entry
126489059 CDS
T08493
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04136
Autophagy - other
mfot04140
Autophagy - animal
mfot04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126489059
04136 Autophagy - other
126489059
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126489059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mfot04131
]
126489059
03029 Mitochondrial biogenesis [BR:
mfot03029
]
126489059
Membrane trafficking [BR:
mfot04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126489059
Others
Specific organelles associated proteins
Auto phagosome
126489059
Mitochondrial biogenesis [BR:
mfot03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126489059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
KASH_CCD
ZapB
TolB_like
CCDC93_CC
Img2
Motif
Other DBs
NCBI-GeneID:
126489059
NCBI-ProteinID:
XP_049979034
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYTKLLEKSDLHSVLAQKLQAEK
HDIPNRHEISPGHDGAWSDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQVNEAKIAECLQTISNLETECQDLRTKLQDLELANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSIPAPQDNVDT
HPASGKDVRVPTTAMYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKG
SLTGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
VVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNTVKQTFSAPGFKCGSDWTRV
VFSPDGGYVTAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSK
AVLWAQP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgcagactttccccgctggaagcgccacatcgcggaggaa
ctgaggcgccgggaccggctgcagaggcaggcgttcgaggagatcatcctgcagtatacc
aagttgctggaaaagtcagatcttcattcagtattggcccagaaactacaagctgaaaag
catgacataccaaataggcacgagataagtcctggacacgatggtgcgtggagtgacagt
cagctacaagaaatggcccagttgaggatcaaacaccaggaagaactgacagaactgcat
aagaaacgtggggagttagcccagttggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcaggtgaatgaagcaaaaattgcagagtgtttacagaccatctctaac
ctggagacagaatgccaggacctgcgcaccaaactgcaggacctggagctagccaaccag
accctgaaggatgagtatgatgccctgcagattactttcactgctctagaggagaaactg
aggaaaactactgaggagaaccaggagctggtcaccaggtggatggctgagaaggcccag
gaagcaaatcgcctcaatgcagaaaatgagaaggactccaggaggcggcaagcacggctg
cagaaggagcttgcagaggcagcaaaggaacccttgcctgttgaacaggatgatgacatt
gaagtcattgtggatgagacctcagatcacactgaagagacctctcctgtgcgagccatc
agcagagcagctactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggagacgctctgtctcttccatcccagcccctcaggataatgtggacact
catcctgcttctggtaaagatgtgagagtcccaactactgccatgtatgtctttgatgca
catgatggggaagtcaatgcagtgcagttcagtccaggttcccggttactggccactgga
ggcatggaccggagggttaaactttgggaagcattcggagataaatgtgaattcaagggt
tccttgactggcagtaatgcgggaattacaagcattgaatttgatagtgctggagcttac
ctcttagcagcttcaaatgattttgcaagtcgaatctggactgtggatgattatcgatta
aggcacacactcacaggccacagtgggaaagtgctctctgccaagttcctgctggacaat
gctcggatagtctcaggaagtcacgaccggaccctcaaactctgggatctacgcagcaaa
gtctgcataaagacagtgtttgcaggatccagctgcaatgacattgtttgcactgagcaa
tgtgtaatgagtggacattttgacaagaaaattcgtttctgggatatacgatcagagagt
gtggtccgagaaatggaacttttggggaagatcactgctctggacttaaaccccgagaga
actgagctcctgagctgttcccgtgatgacctgctgaaagtcattgacctccggacaaat
actgtcaagcagacgttcagtgcacctggcttcaaatgtggctctgactggacccgagtt
gtcttcagccctgatggcggttatgtgacagcaggctcagccgaggggtctctgtatgtc
tggagtgtgctcacagggaaagtggagaaggttctttcaaaacagcacagctcctccata
aatgcggtggcctgggcgccctcaggcttgcatgttgtcagcgtggacaaaggaagcaaa
gctgtgttgtgggcacaaccttga
DBGET
integrated database retrieval system
