Alexandromys fortis (reed vole): 126489547
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Entry
126489547 CDS
T08493
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04517
IgSF CAM signaling
mfot04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126489547
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126489547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mfot04812
]
126489547
Cytoskeleton proteins [BR:
mfot04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
126489547
Intermediate filaments
Intermediate filament-binding proteins
126489547
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
126489547
NCBI-ProteinID:
XP_049979834
LinkDB
All DBs
Position
Unknown
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSAHFEQAIKEGEDMIAEEHFGSEKIRERIT
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKISAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVREKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRGLVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
KQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQWDTAKGDQVSQNGLPAEQGSPRMAETMDTSEMVNGAAEQRTSS
KESSPVPSPTSDRKAKSALPAQSAATLPARTQETAAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAACEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtggccacagactatgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaacgaaaacagctccgcacggctcttc
gagcggtcccgtatcaaggctctggcagatgagcgtgaagccgtacagaagaagaccttc
accaaatgggtcaactcccaccttgcccgagtgtcctgccgaatcacagacctgtacacc
gacctccgagatggacggatgctcatcaagctgctggaggtcctctccggagagaggctg
cctaaacccacaaagggacggatgcgcatccactgtctggagaatgtagacaaggctctt
cagttcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtggagaccgaagacaacaaagagaaaaagtctgccaaggatgctctgctg
ctgtggtgccagatgaagacagctgggtacccaaatgtcaacattcacaacttcaccacg
agctggagggatggtatggccttcaatgcactgatacacaagcaccggcctgacctgata
gattttgataaactgaagaaatccaatgcacactacaacctgcaaaatgcatttaacctg
gcagagcagcaccttggcctcactaaactgttagaccctgaagatatcagcgtggaccac
cctgatgagaagtctatcatcacctatgtggtgacctactaccactacttctccaagatg
aaggccttggctgtggaaggaaagcggattgggaaggtgctcgacaatgctattgagaca
gagaaaatgattgagaagtatgagtcacttgcctctgaccttctagagtggattgaacaa
accatcatcatcctgaacaatcgcaagtttgctaattccctggttggggtccagcagcag
cttcaggcgttcaacacttaccgcacagtggagaaaccacctaagttcaccgagaagggg
aacttggaggtgctgcttttcacaattcagagcaagatgagagctaataatcagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgaacgagaactggccctgcggaatgagctcataaggcaggaaaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacgtggctgagcgaa
aaccagcgactggtgtctcaggacaactttggatttgaccttcccgcagttgaggccgcc
accaaaaagcacgaggccattgagacagacattgctgcatatgaagagcgtgtccaggct
gtggtggccgtggccagggaacttgaagcagagaactaccatgacatcaagcgcattacg
gcgaggaaggacaatgtcatccggctctgggagtacttgctggaattgctcagggccagg
aggcagcgtcttgagatgaacctggggctgcaaaagatattccaggaaatgctttacatt
atggactggatggacgaaatgaaggtgctattgctgtcccaagactacggcaaacacttg
cttggtgtagaggacttattacagaagcatgccctggttgaagctgacattgcaatccaa
gcagagcgggtaagaggtgtgaacgcctctgcccagaagtttgcaacagatggggaaggc
tacaagccctgcgacccccaggtcatccgagaccgcgttgcccacatggagttctgctat
caggagctttgtcagctggcagcagaacgtagggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggaaggctggattcgggagaaggagaaaatc
ttgtcctctgatgattacgggaaagacctgaccagtgtcatgcgcctgctgagcaagcac
cgggcgtttgaggatgagatgagtggccgcagtgcccacttcgagcaggctatcaaagaa
ggcgaagacatgatcgcagaggaacactttggatcagaaaagatccgcgaaagaatcact
tacatccgggaacagtgggccaacctggagcagctctcagccattcggaagaagcgcctc
gaggaggcctccttactgcaccagttccaggctgatgctgacgacatcgatgcctggatg
ctagatatcctcaagatcgtctccagcaacgacgtgggccatgacgagtactccacacag
tctctggtgaagaagcataaagatgtggcggaagagatcaccaactacaggcccactatt
gacaccctgcatgagcaagccagtgccctgccccaagcacacgcagagtctccagatgtg
aggggccgcctggccggcatcgaggagcgctacaaggaggtggcagagctgacacggctg
aggaagcaggccctgcaagataccctggccctgtacaagatgttcagcgaggccgatgcc
tgcgagctctggattgatgagaaggaacagtggctcaacaacatgcagatccccgagaag
ctggaggacctggaagtcatccagcacaggtttgagagcctagaacccgaaatgaacaac
caggcttcccgggttgctgtggtgaaccagatcgcacggcagctgatgcacagtggccac
cccagtgaaaaggagatcagagcccagcaggacaaactcaacacgaggtggagccagttc
cgagagctggtggacaggaaaaaggatgccctgctgtctgccctgagcatccagaactac
cacctcgagtgcaatgagaccaagtcctggatccgggaaaagaccaaggtcattgagtct
acccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgaccggc
atggaacgagatttggtggccattgaggcgaaactgagcgacctgcagaaagaagccgag
aagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgagatc
agcgatgtgtgggaggagatgaagacgaccctgaagaaccgagaggcctccctgggagag
gccagcaaactgcagcagttcctgagggacttggatgacttccagtcttggctgtccagg
acccagactgccatcgcctcagaggacatgccaaacaccctgactgaggcagagaagctt
ctcacacagcatgagaacatcaaaaacgagattgacaattacgaggaggactatcagaag
atgagggacatgggtgagatggtcacgcagggacagacggatgcgcagtacatgttcctg
cgacagcggctgcaggccttagacacgggctggaatgagcttcataagatgtgggagaac
agacagaaccttctctcccagtcccacgcctaccagcagttcctccgggacacgaaacaa
gccgaggctttcctcaataaccaggagtatgttttggctcataccgaaatgcccactacc
ctggaaggggctgaagcagctattaaaaagcaggaggacttcatgaccaccatggacgcc
aacgaggagaagatcagcgctgtggtggagacgggccggaggctggtgagcgatggcaac
atcagctcggatcgcatccaggagaaggtggactctattgacgacagacacaggaagaac
agagaggcggccagtgaacttctgatgagattaaaggacaaccgagacctacagaaattc
ctgcaagattgtcaagagctgtccctctggatcaatgagaagatgctgaccgcccaggac
atgtcttacgatgaagccagaaacctgcacagtaaatggttaaagcatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagagaagccagaaacagaagctgtggtgagggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctcttcgatgcaaat
aaggctgagcttttcacacagagctgtgcagacctagacaaatggctccatggcctggag
agccagatccagtctgacgactacggcaaagaccttaccagcgtcaatattctgctgaaa
aagcaacagatgctggagaatcagatggaagtgcggaagaaggagatcgaggagctccag
agccaagcgcaggcactgagccaggaggggaagagcactgatgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggagctcctggagcccttgaatgagaggaagcacaat
ctgttagcctccaaagagatccaccaattcaacagggatgtggaggacgaaatcttgtgg
gttggtgagaggatgcctttggccacgtccacagatcatggccataaccttcaaactgtg
cagctgttgataaagaaaaaccagaccctccagaaagaaatccaaggacaccagcctcgt
attgatgatatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgct
gaggctatcaggcagagactcgccgacctgaagcaactgtgggggcttctcattgaggag
accgagaaacgccatagacggctcgaggaggcacacaaagcccagcagtactactttgat
gcagctgaagccgaggcttggatgagcgaacaggaactgtacatgatgtccgaggaaaag
gccaaggatgagcagagtgctgtctccatgttgaaaaagcatcagattttggaacaagct
gttgaggactatgcagagacagtacaccagctctccaagaccagccggggcctggtggct
gacagccatcccgaaagcgagcgtattagcatgcggcagtcaaaagtggataagctgtat
gccggcctgaaggaccttgctgaagaaaggagaggaaaacttgacgagaggcacaggctc
ttccagctcaacagggaggtcgatgacctggaacagtggattgctgagagggaggtggtc
gcagggtcacatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacaccgggaacattgggcaggagcgcgtggatacagtcaatcat
atggcagatgacctcatcaactctggacactcagatgctgccaccattgcggagtggaaa
gacggtctcaatgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
ctcgctgcctcctacgaactgcataagttctaccatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccccgaggagcttggaagagatcagaacactgtggag
accttacagagaatgcatacgacctttgagcacgacatccaggctctgggcacgcaggtg
aagcagctgcaggaggacgcagcccgcctccaggcagcctacgcaggggacaaggctgac
gacatccagaaacgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggccgcagggtgcggctggtggacacgggagacaagttccgcttcttcagcatggtc
cgggacctcatgctctggatggaagatgtcatccggcagatcgaggcccaggagaaacca
cgggatgtgtcctctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaatgacagtttcacaacttgcattgaacttgggaaatccctgctggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacggaaaaaagaaaa
gagatgattgacaagtgggaagaccgatgggagtggctaagactgattttggaggttcat
cagttctcaagagatgccagtgtggctgaggcttggctgcttggacaggaaccataccta
tccagccgcgaaattggccagagtgtggatgaagtggagaaactgatcaagcgccacgag
gcatttgaaaagtctgcagcaacctgggacgagagattctctgccctggaaaggctgaca
acattggagttactggaagtgcgcagacagcaagaggaagaagaaagaaagaggcggccg
ccttctccagagccaagcacgaaggtttcagaggaggctgagtcccagcaatgggatact
gcaaaaggagaccaagtttcccagaatggtttgccagctgaacagggatctccacggatg
gcagaaaccatggacacaagtgaaatggtcaacggtgctgccgagcagaggacgagctcc
aaggagtctagtcctgttccctctcccacctctgaccgcaaggccaagtctgcacttccg
gcccagagtgctgccaccctgccagccaggacccaagagacagcagcggcccagatggaa
ggcttcctcaatcggaagcatgagtgggaggcccacaataagaaggcctcaagcaggtcc
tggcacaatgtttattgtgtcataaataatcaggaaatgggcttctataaagatgccaag
agtgctgcttccggcatcccctaccacagtgaggtccctgtgagtttgaaggaggctgcc
tgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaatgat
ggcaacgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccaggcc
atctcctccgccatctcctccgacaaacacgacctgtctgccagcacccagagtacgcca
gcatccagccgggcgcagaccttacccaccagcgttgtcaccatcaccagcgagtctagt
cccggcaagagggagaaggacaaagagaaagacaaagagaagcggttcagcctttttggc
aaaaagaagtga
DBGET
integrated database retrieval system
