Alexandromys fortis (reed vole): 126490208
Help
Entry
126490208 CDS
T08493
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03440
Homologous recombination
mfot04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126490208
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126490208
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mfot01002
]
126490208
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mfot04121
]
126490208
03036 Chromosome and associated proteins [BR:
mfot03036
]
126490208
03400 DNA repair and recombination proteins [BR:
mfot03400
]
126490208
Peptidases and inhibitors [BR:
mfot01002
]
Metallo peptidases
Family M67
126490208
Ubiquitin system [BR:
mfot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126490208
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126490208
BRISC complex
126490208
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
126490208
DNA repair and recombination proteins [BR:
mfot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
126490208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
TEDC1
UPF0172
Motif
Other DBs
NCBI-GeneID:
126490208
NCBI-ProteinID:
XP_049980913
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAVQVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMR
TVAEKMDTIRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW
YHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQK
SSEYERIEIPIHIVPHITIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNG
SVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQQEKEELMEELSSLE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggtggtgcaagctgtgcaagcggttcatcttgagtctgacgctttccta
gtttgtctcaaccatgctctgagcacagaaaaggaggaggtgatgggtctatgtataggg
gagttgaatgatgacataaggagtgactccaaatttacatacactggaactgaaatgcgc
acagttgcagaaaagatggataccatcagaattgttcacatccattctgtcattatcttg
cgacgttctgacaagagaaaggaccgtgtagaaatttctccagagcagctgtctgcagcc
tcaacagaggcagaaaggttggctgaactgacaggtcgtcccatgagagttgttggctgg
tatcattctcaccctcacataaccgtttggccttcccatgttgatgttcgtacacaagcc
atgtaccaaatgatggatcaaggctttgtaggacttattttttcctgtttcatagaagac
aaaaacacaaagactggtcgggtactctacacttgcttccaatccatacaagcccaaaaa
agctcagagtatgagagaattgaaatcccaatccatattgtacctcatatcactattggg
aaggtatgccttgaatcagcagtagaactgccaaagatcctatgtcaggaagaacaggat
gcatatagaaggattcatagccttacacatctggactcagtaaccaagatccataatggc
tcggtgtttaccaagaatttatgcagtcagatgtcagcagtcagtgggcctctactacag
tggttggaggacagattggagcaaaaccagcagcatttgcaagagttgcaacaagaaaaa
gaagagcttatggaagagttgtcttccctagaataa
DBGET
integrated database retrieval system
