Alexandromys fortis (reed vole): 126490260
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Entry
126490260 CDS
T08493
Name
(RefSeq) plexin-A3 isoform X1
KO
K06820
plexin A
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126490260
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
Sema
TIG_plexin
RasGAP
Motif
Other DBs
NCBI-GeneID:
126490260
NCBI-ProteinID:
XP_049981025
LinkDB
All DBs
Position
Unknown
AA seq
1957 aa
AA seq
DB search
MASKLACACYSFICPIRGPSPLPASATIWGSVMLDEFPCPSVAWSLACQGPWARQVRGME
KSLGLGSLTPTCCLSSGLSLVQLPVMPTVCLFPLLFFTIGGCLGSSRPFRTFVVTDTTLT
HLTVHRVTGEVFVGAVNRVFKLAPNLTELRAHVTGPVEDNSRCYPPPSMRVCSHRLVPVD
NVNKLLLIDYAARRLVACGSIWQGICQFLRLDDLFKLGEPHHRKEHYLSGAQEPDSMAGV
IVEQGQGPSKLFVGTAVDGKSEYFPTLSSRKLIDDEDSADMFSLVYQDEFVSSQIKIPSD
TLSLYPAFDIYYIYGFVSASFVYFLTLQLDTQQTLLDTAGEKFFTSKIVRMCSGDSEFYS
YVEFPIGCSWHGVEYRLVQSAHLAKPGQLLAQALGVPADEDVLFTIFSQGQKNRASPPRQ
TILCLFTLSNINAHIRQRIQSCYRGEGTLALPWLLNKELPCINTPMQINGNFCGLVLNQP
LGGLHVIEGLPLLADSTDGMASVAAYTYHQHSVVFIGTRSGNLKKVRVDGAQDAQLYETV
SVVEGSPILRDLLFSPDHQHIYLLSEKQVSQLPVETCEQYLSCAACLGSGDPHCGWCVLQ
HRCCREGACSGASAPHGFAEELNKCVQVRVRPNNVSVTSPGVQLTIAMRNVPDLSAGVSC
SFEEVTKSEAILLPSGELRCPSPSLQELQTLTRGHGATHTVQLQLLSMETGVRFAGVDFV
FYNCSALQSCMSCVGSPYPCHWCKYRHVCTSHPHECSFQEGRVHSPEGCPEILPRGDLLI
PVGVMQPLTLRAKNLPQPQSGQKNYECVVRVQGRQHRVPAVRFNSSSVQCQNASYFYEGD
EFGDTELDFSVVWDGDFPIDKPPSFRALLYKCWAQRPSCGLCLKADPRFNCGWCISEHKC
QLRAHCPAPKSNWMHPSQKGARCSHPRVTQIHPLTGPKEGGTRVTIVGENLGLTFREIGL
RVAGVRCNSIPTEYVSAERIVCEMEESLVPNPPSGPAELCVGDCSADFRTQSDQLYSFVT
PTFDRVSPTRGPASGGTRLTISGTSLDAGSRVTVIVRDGECQFVRRDAEAIVCISPVSTL
GPSQAPISLAIDHANISSPGVIYTYTQDPTVTHLEPTWSIINGSTAITVSGTHLLTVQEP
RVRAKYRGIETTNTCQVINDTAMLCKAPGIFLGHPQPRAQGEHPDEFGFLLDHVQTARSL
NRSSFTYYPDPSFEPLGPSGVLDVKPGSHVVLKGKNLIPAAAGSSRLNYTVLIGGQPCAL
TVSDTQLLCDSPSQTGRQPVMVLVGGLEFWLGTLHITADRALTLPAMVGLAAGGGLLLLA
ITAVLVAYKRKTQDADRTLKRLQLQMDNLESRVALECKEAFAELQTDINELTNHMDGVQI
PFLDYRTYAVRVLFPGIEAHPVLKELDTPPNVEKALRLFGQLLHSRAFLLTFIHTLEAQS
SFSMRDRGTVASLTMVALQSRLDYATGLLKQLLADLIEKNLESKNHPKLLLRRTESVAEK
MLTNWFTFLLHKFLKECAGEPLFLLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQID
YKTLTLHCVCPESEGSAQVPVKVLNCDSITQAKDKLLDTVYKGIPYSQRPKAEDMDLEWR
QGRMARIILQDEDVTTKIECDWKRVNSLAHYQVTDGSLVALVPKQVSAYNMANSFTFTRS
LSRYESLLRAASSPDSLRSRAPMLTPDQEAGTKLWHLVKNHDHADHREGDRGSKMVSEIY
LTRLLATKGTLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQADQRQISDPDVRHT
WKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNK
LLYAKDIPNYKSWVERYYRDIAKMASISDQDMDAYLVEQSRLHANDFNVLSALSELYFYV
TKYRQEILTSLDRDASCRKHKLRQKLEQIISLVSSSS
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaagcttgcctgtgcttgttactcattcatttgccctattagaggcccttcc
cctctcccagcctcagccaccatctggggctctgtcatgttggatgagtttccctgcccc
tctgtggcatggagcctggcctgccagggtccctgggccaggcaggtcagggggatggag
aagagcttgggcctggggtctctgactcccacttgttgtctctcctcaggcctgtccctg
gtacagctgccggtcatgcccactgtctgccttttcccattgctattcttcactatagga
gggtgcctgggtagcagcaggccctttcgtacctttgtggtgacagataccacactgact
cacctgactgtccaccgagtgaccggggaggtatttgtaggtgcagtgaaccgagttttc
aagctggctccaaacctgactgagctacgggcccatgttacagggcccgttgaggacaat
tctcgttgctacccaccccctagcatgcgtgtgtgctcccatcgcctggtgcctgtggac
aatgtgaacaagctgctcctcatagactatgcagcccgtcgtctggtagcttgtggcagt
atctggcagggcatctgccaattcctgcgtctggatgatctcttcaagttgggtgagccc
caccatcgcaaggagcattacctgtcaggggcccaagagcctgactccatggctggtgtc
attgttgaacagggccaggggcctagcaagctgtttgtgggcactgcagttgatggcaag
tctgaatactttcccaccttgagttcccgtaagctcatcgacgatgaagacagtgcagat
atgttcagtctggtgtaccaggatgagtttgtctcctctcagatcaagattccttcagac
acactttccctgtaccctgcctttgacatctactacatatatggctttgtcagtgcctca
ttcgtgtacttcttaacactgcagctggacacccagcagacgctgctggatacagcaggc
gagaaattcttcacatccaagattgtgcgcatgtgttcaggagactcagagttctactct
tatgtagagtttcccattggctgctcctggcatggtgtggagtaccgcttagtgcagagt
gcccacttggccaagcctggccagctcctggcccaggctttgggtgtgccagccgatgag
gatgtcctcttcaccatcttctctcagggccagaagaaccgagccagcccacctcggcag
accatcctttgcctcttcactctcagcaacatcaatgcccacatccggcagcgaatccaa
tcatgctaccgtggggagggcacactggccctgccctggctgctgaataaggagctgcca
tgcatcaacacccccatgcagatcaatggaaacttctgtgggttagtgttgaatcaacca
ttgggtggcctacacgtgattgaggggctacccctgttggccgacagcactgacggcatg
gccagtgtagctgcttatacctaccaccagcactctgtggttttcatcggtacacgcagt
ggtaatctgaagaaggtgcgggttgatggcgctcaggatgcccagctgtatgagacggtc
tctgttgtcgagggcagccccatactccgagacctgctctttagccctgaccaccagcac
atctatctcctgagtgagaagcaggtgagccaactcccggtggagacctgtgagcagtat
ctgagctgcgctgcatgcctgggctcaggggacccacactgtggttggtgtgtgctacag
cacaggtgctgccgtgaaggggcctgctcaggtgcctctgctccacatggctttgccgag
gagctgaacaaatgtgtacaggtgcgggtccggcccaataatgtgtcggtgacatcccct
ggagtgcagctgaccatagccatgcgcaacgtgccagaccttagtgcgggtgtgagctgt
tcatttgaggaggtgactaaaagtgaggctattctcctgccctctggagagcttcgttgc
ccttcaccatccctccaggagctccagacacttaccagagggcatggggccactcatact
gtgcagctgcagctgctctccatggagactggtgtgaggtttgctggggttgactttgtc
ttctacaactgcagtgcccttcagtcgtgcatgtcctgtgttggcagcccttacccctgc
cactggtgtaagtaccgccatgtgtgtaccagccacccacacgagtgctccttccaggag
ggcagggtccacagccctgagggatgtcctgagatcctgcctcgaggagacctcttgatc
cctgtgggtgttatgcagcctctaaccctgcgggctaagaatctgccacaacctcagtca
ggccagaagaattatgaatgtgtagtccgtgtacaggggcggcagcatcgggtacctgca
gtgcgctttaacagcagcagtgtgcagtgccagaatgcttcgtatttctatgaaggtgat
gagtttggtgacaccgaactggacttctctgtggtctgggatggagatttccccattgat
aagcctcccagcttccgagcccttctttacaagtgctgggctcagagacctagttgtggc
ctctgcctcaaagctgatccccgcttcaactgtggctggtgcatctcggagcacaagtgc
caactgagggctcactgcccagctcccaagagcaactggatgcacccaagccagaagggt
gcccgatgcagccatccacgagtcacccagatccatccactcacaggacccaaggaaggt
ggcacccgggtcaccattgtgggtgagaacctgggcctcactttccgtgagattggcctg
cgagtagctggtgtacgttgtaactccatccccactgaatatgttagtgctgaaaggatt
gtatgtgagatggaggaatcactggtgcccaacccaccatctgggcctgctgagctctgt
gtaggtgactgttcagctgactttcgcacacagtcggatcagctctacagctttgtgacc
ccaacatttgaccgtgtgagtcctactcggggcccagcttctgggggcactcggctcacc
atctctggaacttctctggatgctggcagcagggtcacagtgattgtaagagatggcgag
tgccaatttgtgaggagagatgccgaggcaatcgtgtgtatctcacctgtctccaccctg
ggcccaagtcaggcccctatcagccttgccattgaccatgccaacatctccagccctgga
gtcatctatacctacacccaggaccccactgtcacacaccttgagccaacctggagcatc
atcaatggaagtactgccatcactgtgagtgggacccatctgctgacagtgcaagaaccc
cgtgtacgggcaaaataccgtggtattgagaccactaatacatgccaggtgatcaacgac
actgcaatgttatgtaaggcccctggcatcttccttgggcaccctcagcctcgggcccaa
ggcgagcaccctgatgagtttggcttcttgctggatcatgtgcagacagctcgctccctc
aaccgttcttccttcacctactatccggatcccagctttgaaccacttgggccatctggt
gtgctagatgtcaaacctggctcacatgttgtattgaagggcaagaacctgatccctgct
gcagctggcagctcccgcctcaactatacagtgctgattggaggacagccgtgtgcacta
actgtttcagatactcaacttctgtgtgattcccctagccagacaggccggcaaccagtc
atggtgctggtgggcggcttggagttctggttgggcaccctacacatcactgctgatcgg
gcactaactttaccagctatggtggggctggcagcagggggtgggctcttgctgctggcc
atcactgctgtgctggtcgcctacaagcgaaagactcaagatgcagaccgaacactaaag
cggctccagctacagatggacaacctggaatctcgtgtggcgttggagtgcaaagaagct
tttgctgagctacagacagatatcaatgaactgacaaaccacatggatggtgtgcagatt
cccttcttggactatcggacctatgccgtgcgggtgcttttccctggcattgaggcccac
ccagtgctcaaggagctggatactcccccaaacgtggagaaggccctacgcttgtttggg
cagctgctgcacagccgtgccttcctgctcaccttcatccacactttggaggcccagagc
agcttctctatgcgtgaccgtggcactgtagcatccctcaccatggtggccctgcagagc
cggcttgactatgccactggactactcaagcaactgctggctgacctcatagagaaaaac
ctggagagcaagaaccacccaaagctgctattgcgcaggacagagtcagtggctgagaag
atgctcaccaactggtttacattcctgctgcataagttcctgaaggagtgtgccggggag
ccacttttcctgctgtactgtgccattaagcaacagatggagaaaggtcccattgatgcc
ataacaggcgaggcccgctactccttaagtgaggataaactcatccggcagcagattgac
tacaagaccctgactcttcattgtgtgtgcccggagagcgagggcagtgctcaggtccct
gtgaaggttctcaactgtgacagcatcacccaggccaaagacaagctgttggatactgtg
tacaagggtatcccatactctcagcgccccaaagctgaggacatggacttggaatggcgc
cagggccgcatggcccgaatcatccttcaagatgaggatgtcactacaaagatagagtgt
gactggaagagggtcaactcactggcccactaccaggtgacagatggttccttagtagcc
ctggtgcccaaacaagtgtctgcctataacatggccaactccttcaccttcacccgttca
ctcagtcgctacgagagcttgctccgtgctgccagcagcccggatagcctgcgttcccga
gcgcctatgcttacaccggaccaggaggcaggcaccaagctgtggcatctggtgaagaac
catgatcatgctgatcaccgagagggagaccgtggcagcaagatggtctcagaaatatat
ctgacaaggctgctggccaccaagggcacattgcagaagtttgtggatgacctatttgaa
actgtgttcagtacggcccatcggggttcagctttacccttggctatcaagtacatgttt
gacttcctggatgaacaggccgaccagcgccagatcagtgaccctgatgtgcgccacacc
tggaaaagcaactgcttacctctgcgtttctgggtgaatgtgatcaagaacccgcagttt
gtgtttgacatccacaagaatagcatcacggatgcctgtttgtcagtggtggcccagacc
ttcatggactcctgttctacatcagagcaccgtctgggcaaggactccccttccaacaag
ctgctctacgccaaggatatccctaattacaagagctgggtggagaggtactaccgagat
atcgcaaagatggcatcaatcagtgaccaggacatggatgcctacctagtggaacaatcc
cgcctccatgccaatgacttcaatgttctaagtgcactcagtgagctctacttctatgtc
accaagtatcgtcaggagatccttacctcgctggaccgagatgcctcttgtcggaagcac
aagcttcgacagaagctggagcagatcatcagcctggtgtccagcagcagctga
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