Alexandromys fortis (reed vole): 126491039
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Entry
126491039 CDS
T08493
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126491039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126491039
Enzymes [BR:
mfot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126491039
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126491039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
126491039
NCBI-ProteinID:
XP_049982385
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MLASKHTPWRRLQGISFGMYSAEELKKLSVKSITNPRYVDSLGNPSANGLYDLALGPADS
KEVCSTCVQEFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLSCHMLTCPRAAIHLL
VCQLRVLEVGALQAVYELERILSRFLEETADPSAFEIQEELEEYTNKILQNNLLGSQGAH
VKNVCESRSKLVAYFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPATVHRKSGQKDA
EPPEGVPAAPGIEDALLGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGMESSFN
PSMFFLDFIVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDAVLIRKLLALMAQEQKLPC
EVTELTTDKENESSVVIDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMLEK
YPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYISTNEIGIPLVFATKLTYPQPVT
PWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDATQREAVAKQLLTPATGAPKPH
GTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDE
MNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQY
MELVYRGLTDKVGRVKLFAPAILKPYPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGS
KAWVKETPRPVPDFDPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGET
SGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPDADMKRQRIIEESTQCGPRAVRAALNL
PEAASCDEIQGKWQDAHLGKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENN
LQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTG
RFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGS
VVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLQEVLSRADPQKVLRHFKAIK
KWHSKHSSALLRRGAFLSFSQKIQAAVKALNLKGKNENGRSPETRQMLQMWYELDEQSRW
KYQKRAAPCPDPSLSVWRPDIYFASVSETFEKKIDDYTQEWAAQAERSYKKSELSLDSLR
TLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILM
VASANIKTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLQKVDVQESFHMGEKQNKFR
MYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIKKKNSKASAFRSVNTRRAT
QKDLDDAEDSGKNRREEEGDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEG
EEEVEEEDAQEEGNINSEGAHQAHEPGEEEGSGLEEESSQKPPRRHSRPQGAEAVERRIQ
TVREAHSFIEDYQYDTEESLWCQVTLKLPLMKTNFDMSSLVVTLAHNAIVYTTKGITRCL
LNETTNSKNEKELVLNTEGINLPELFKYSEVLDLRRLYSNDIHAMANTYGIEAALRVIEK
EIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQ
ATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgctggcctccaagcacacgccatggaggcgccttcagggcatttcgttcgggatgtat
tcggccgaggagctcaagaaattaagtgttaaatccattacaaatcctcgctatgtggac
agcctgggaaacccttcagcaaatggcctgtatgatttggctttgggtcccgcagattcc
aaagaagtgtgctccacctgcgtgcaggaattcaacaactgctcgggacacctgggccac
attgagctccctctcaccgtgtacaaccctctcctcttcgataaactctatctcctgctc
cgaggttcctgtttaagttgccacatgctgacttgtcctcgggctgccattcacctgttg
gtctgccagcttcgagtcctggaagttggagctctacaagcggtctatgagcttgaacga
attctgagcaggtttctggaagaaactgctgatccttctgccttcgaaattcaagaagag
ttagaagaatacacaaacaaaattctacagaacaacctcttggggtcccaaggtgcacat
gtgaaaaatgtctgtgaaagcaggagcaaactcgttgcttacttctggaagacgcatatg
gccgctaagcgatgtccccactgcaagaccggacggtcagtggttcgaaaggaacacaac
agtaagctaacaattacatacccagccacggtgcacagaaaatctggccagaaggatgca
gagcccccagaaggagtaccagcagctccaggaattgaagacgctctgctggggaagcga
gggtacctgacacctagcagcgcccaagagcatctttttgccatttggaagaacgaagga
ttcttcctgaattaccttttttcgggattggatgatattggcatggagtccagtttcaac
cctagtatgttctttctagatttcatagtggtgccgccttccaggtatcgccccgtcaac
cgcctgggggaccagatgtttactaacggccagaccgtgaacttgcaagctgtcatgaag
gatgcagttttgatccggaaacttctggcgttgatggcccaagaacagaagctaccctgt
gaggtgacagagctcaccacagacaaggaaaatgaatcttcagttgttatcgaccgatcc
tttttaagtatgcttccaggccagtctctcacagataagctttacaacatttggattcgc
cttcagagccacgtcaatattgtgtttgacagtgagatggacaaattaatgttggaaaag
taccctggcatacgacagatccttgagaagaaggaaggcctgttccggaagcacatgatg
ggaaagcgggtcgactatgctgcccgttcggtcatctgcccagacatgtacatcagcacg
aatgagattgggattcccttggtatttgccacaaaactgacctaccctcaaccagttacc
ccctggaacgtgcaggaactgagacaagcagtcattaatggacccaacgtgcacccggga
gcctccatggtcatcaatgaggatggcagtcgcacagccctgagcgcggtggatgctaca
cagcgggaagccgtggccaaacagctcttgacaccagccacaggggctcctaagccccac
gggacaaaaattgtgtgccggcacgtgaagaatggggacattctcctactgaaccgacag
cctaccttgcacagaccctccatccaggcccaccgtgcccacattctgcctgaagaaaag
gtcctacgccttcactatgccaactgcaaagcctataatgctgactttgatggagacgag
atgaacgcccacttcccccagagtgagttaggccgagctgaagcctatgtcctggcctgc
actgatcagcagtatcttgttcccaaggatggccagccattggcagggctgattcaagat
cacatggtttcaggtgcaaacatgaccattcggggatgctttttcacccgggagcagtac
atggagctggtgtaccgagggctcacagacaaagtgggacgtgtgaagctctttgctcct
gccatcctgaagccctacccactgtggacaggaaagcaggtcgtgtcaaccctgctcata
aacataatcccagaggaccacatccccctgaacttatctggaaaggcaaaaatcggcagt
aaagcctgggtgaaggaaactccacggcctgtccctgactttgaccctgactccatgtgt
gagtctcaggtgatcatcagggaaggggagctgctctgtggagtgctggacaaggcacac
tacgggagctctgcctatggcctggtccactgctgctatgagatctatgggggtgagacc
agcggcagggttctcacctgcctagcccgcctcttcactgcctacctgcagctctataga
ggtttcaccttgggtgtagaagacattttggttaagccagatgcagacatgaagagacag
cgcatcattgaagaatccacccagtgtggaccccgggctgtcagagctgcgttgaacctg
ccagaagctgcatcatgtgatgagatccaagggaaatggcaggatgcccatctggggaaa
gaccagagggattttaatatgattgatatgaagttcaaggaggaagtgaaccattacagc
aacgagatcaacaaggcatgtatgcctttcggcttgcacagacagttccctgagaacaac
ctgcagatgatggtgcagtcgggagcaaaagggtcaaccgtgaacacaatgcaaatctct
tgcctgctgggccagattgagttggaaggtcggagaccccctttgatggcatctggcaag
tcactaccctgcttcgagccttacgagttcacccccagggctggtggcttcgtcactgga
aggttccttacgggtatcaggcctcctgagttcttctttcactgcatggcgggacgagaa
ggcctggtagacactgctgtcaaaaccagccgatctggctatctccaaaggtgtatcatc
aagcacctggaggggctggtcatccagtatgatctgacagtccgtgatagcgacggcagc
gtggtacagttcctatatggggaggatggcctggacatccccaagacacagttcctgcaa
cccaagcagttccccttcctggccagcaactatgaggtgataatgaagtccaagcatctt
caggaagtattatccagagcagatccccagaaagtgctccgccacttcaaagccattaag
aaatggcatagcaagcattccagtgccctgctgcgaagaggtgccttcctgagtttttcc
cagaagattcaggcagctgtgaaagccttgaacctgaagggcaagaacgagaatggccgc
agcccagaaacccggcagatgttgcagatgtggtatgaactagatgagcagagccgatgg
aaataccagaagagggctgctccttgtcccgaccctagcctgtctgtgtggcgcccagac
atctactttgcgtctgtgtctgaaacatttgaaaaaaaaattgatgactacactcaggag
tgggcagctcaagcagagaggagttacaagaaatccgagctttctctagacagcctgaga
accttactgcagctaaagtggcagcgctccctgtgtgacccaggcgaggctgttggccta
ctggctgcccagagcatcggggagccctccacacagatgacgctgaacaccttccacttt
gcaggcagaggcgagatgaatgtcactctgggcattccaagactgagggagattctcatg
gtggccagtgccaacatcaagacacccatgatgagtgtgcctgtgttcaacaccaagaaa
gcattgaagagagtgaagagcctaaagaagcagctcaccagggtgtgcctgggggaggta
ttgcagaaagtcgatgtccaagagtccttccatatgggagaaaaacagaacaaattccgg
atgtatgagctccggtttcagttcctgccacatgcatattaccagcaggagaagtgcctg
agacctgaggacatcttgcacttcatggaaaccagattctttaaactactaatggaagcc
atcaaaaagaagaatagcaaagcatcggccttcagaagtgtgaatactagaagggctaca
cagaaggaccttgatgacgcggaggactcagggaagaatcggagagaggaagaaggggat
gaagaggaggaggggaacattgtggatgctgaagctgaggagggcgatgcagatgcttct
gacaccaagcgcaaggagaagcaagaggaggaggttgactatgagagtgaggaagaaggg
gaggaggaagtggaggaggaggatgcccaagaggaagggaacatcaacagtgaaggtgcc
caccaggctcatgagccaggcgaggaagagggttcgggcctggaggaggaatcatcccag
aagcctccccgccggcactccaggcctcagggagcagaggctgtggaacgcaggatccag
actgtgcgggaggcccactcattcattgaggactaccagtatgacacagaagagagcctg
tggtgccaggtgactctgaagctcccactgatgaaaactaattttgacatgagctccttg
gttgtgaccttggcccacaatgccattgtctatacaaccaagggaatcactcggtgcctc
ctgaacgaaacaaccaacagtaagaatgagaaggagcttgtgctgaacacagagggaatc
aacctccccgagctgttcaagtactccgaggtgctggacctgcgccgcctctactccaat
gacatccacgccatggccaacacttacggcatcgaggctgccctgagggtcattgagaag
gagattaaggatgtgtttgcagtgtatggcattgcagttgaccctcgccatctctccctg
gtcgctgactatatgtgttttgagggtgtttataagccactcaatcgctttgggatccag
tcaagttcctcccctttgcagcagatgacatttgaaaccagcttccagtttctcaaacag
gccaccatgatgggatcccatgatgaactgaaatcaccttcagcctgtctcgtggtgggg
aaagtcgtcaaaggcgggacaggcctgttcgagctcaagcagcccctaagatag
DBGET
integrated database retrieval system
