Alexandromys fortis (reed vole): 126491067
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Entry
126491067 CDS
T08493
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126491067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfot03032
]
126491067
Enzymes [BR:
mfot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126491067
DNA replication proteins [BR:
mfot03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
126491067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
126491067
NCBI-ProteinID:
XP_049982412
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MAPVHGDDGELGASAVSDSASFVASRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDL
TSVYEEVDEEQYSKLVQARQDDDWIVDDDGTGYVEDGREIFDDDLEDDALDTSGKGSDGR
AHRKDRKDVKKPSVTKPNNIKAMFIASAGKKTADKAVDLSKDDLLGDILQDLNTEISQIS
PPPVLIPKKKRSTGALLNPFSVHTPKAIPSGKPASPVLKKEPLLTPIPLKCAEFAGELAQ
TECPEDEQESGIMEFEDCDFDEPMEAEEVDGEPVTAKTCDQENEPVERVKHEADPTKGTT
SFLESFLPDVSCWEMDQEDESSFLAQEVQVDSSHLPLVKGADDEQVFQFYWLDAYEDPYN
QPGVVFLFGKVWIESAQIHVSCCVMVKNIERTLYFLPREMKIDLNTGKETTTPVTMKDVY
EEFDSKIAAKYKIMKFKSKTVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQHLKGETFS
HVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEAVALKPDLVNVIKDVSP
PPLVVMSFSMETMQNVKNHEHEIIAIAALIHHSFALDKAPPKPPFQTHFCVVSKPKDCIF
PCAFKEVIKKKNMKVEVAATERTLLGFFLAKVHKIDPDILVGHNICGFEMEVLLQRINVC
KVPYWSKIGRLRRSNMPKLGSRSGFGERNATCGRMICDVEISAKELIHCKSYHLSELVQQ
ILKTERIVIPTENIRNMYSESSHLLYLLEQVWKDARFILQIMYELNVLPLALQITNIAGN
IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGR
KKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEVQKAAEDEE
QEQIPELPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNSDLVLQYDIRQKALKLTAN
SMYGCLGFSYSRFYAKPLAALVTCKGREILMHTKDMVQKMNLEVIYGDTDSIMINTNSTN
LEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYITKQEL
KGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFE
INKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLPATQRAYA
PEQLQKQDNLVIDTQYYLAQQIHPVVARICEPIDGIDSVLIALWLGLDSTQFRVHQYHKD
EENDALLGGPAQLTDEEKYKDCEKFKCLCPTCGTENIYDNVFEGSGIDMEPSLYRCSNID
CKASPLTFMVQLSNKLIMDIRHCIKKYYDCWLICEEPTCRSRTRRLPLHFSRNGPLCPTC
MKAVLRQEYSDKSLYTQLCFYRYIFDAECALEKLTEHEKDKLKKQFFTPKVLQDYRKVKN
IAEQFLSWSGYSEVNLSKLFGNYAGKY
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtccacggcgacgatggcgaactgggcgcaagcgctgtgtcagattcagcg
agttttgtagcttctcgagctcgtcgagaaaaaaaatcaaagaaaggacgccaagaagct
ttagagagactgaaaaaggctaaagctggtgagaagtataaatatgaagttgaggacctc
acaagtgtttatgaagaagttgatgaagagcagtattcgaaactggttcaggcacggcag
gatgatgactggatcgtggatgatgatggtacaggctatgtggaagatggccgagaaatt
tttgatgatgaccttgaggatgatgcacttgacacctctgggaaaggaagtgatggcaga
gcacacagaaaggacaggaaggatgtaaagaaaccttcagtgacaaaaccaaacaatatc
aaggcaatgttcattgctagtgctgggaagaaaactgcagataaagcagtagacttgtcc
aaggatgatctgctaggtgacattctacaggatctgaacactgagatatctcaaatatct
ccaccacctgtattgataccaaagaaaaaaagatccactggagctttgctcaatcctttc
tcagtgcacacccctaaggcaattccttcaggaaaacctgcttcccctgtccttaagaag
gaacctctgttaactcccattcctcttaaatgtgctgaatttgctggagagctggcccaa
acagagtgtccagaagatgagcaggaatcagggataatggagtttgaagactgtgacttt
gatgagcccatggaagctgaggaggtagatggggagcctgtgactgccaagacttgtgac
caagagaatgagccagtagagagggtgaaacatgaggcagatcctacaaaagggaccaca
tctttcttagaaagttttctcccagatgtgtcttgttgggaaatggatcaggaggatgaa
agcagtttcttagctcaggaagttcaagtggattccagtcacctcccattagtaaaaggg
gcagatgatgaacaagtatttcaattttactggctggatgcttatgaagatccatacaat
caaccaggtgtggtttttctgtttggcaaagtgtggatcgaatctgcccaaatccatgtg
agctgttgtgttatggtgaaaaacatcgagcgaacactttacttccttccccgtgaaatg
aaaattgacctaaacacagggaaagaaacaacaactccagttacaatgaaggatgtttat
gaagaatttgactcaaaaattgcagcaaaatataaaataatgaagttcaagtccaagaca
gtagaaaagaactatgcttttgagatacctgatgttccagaaaaatctgagtacttggaa
gttagatactcggcggaaatgccacagcttccacagcatttgaaaggtgaaacattttct
catgtatttggaaccaacacgtctagcttggaattgttcttgatgaacagaaagataaaa
ggaccttgttggcttgaagtaaaaaatccacagctcttgaaccagccaatcagttggtgt
aaatttgaggcggtggctttgaaaccagacctggtgaatgtaattaaagatgtcagtcct
cctccacttgtggtaatgtctttcagcatggagacaatgcaaaatgtaaagaaccatgag
cacgagattattgctattgcagctctcatccatcacagttttgctttagataaagcaccc
ccaaagcctccctttcagacgcatttctgtgttgtctctaagccaaaagactgtattttc
ccatgtgctttcaaggaagtcattaagaaaaagaatatgaaggttgaggttgctgcaaca
gaaagaactttgctaggatttttccttgcaaaagttcacaaaattgatcctgatattctt
gtgggtcataatatttgtggttttgaaatggaagtgcttctgcaaagaattaatgtgtgc
aaagttccttactggtccaagataggtcgactgaggcgatccaacatgccaaaacttggg
agccggagtggatttggtgaaagaaacgctacctgtggccgaatgatatgtgatgtggaa
atttcagcaaaagaattgattcattgtaaaagctaccatttatctgaacttgtccaacag
attctgaaaactgaaaggattgtaattccaacagaaaatatacgaaacatgtatagtgaa
tcttctcatctgttgtacctgttggaacaagtctggaaagatgccagattcattttgcag
atcatgtatgagctaaatgttcttccattagcattgcagatcactaacatcgctgggaac
attatgtccagaacactgatgggtggacgatctgaacgaaatgagttcttgttgcttcat
gcattttatgaaaacaactatattgtgcctgacaagcagattttcagaaaacctcagcaa
aaactgggagatgaagatgaagaaattgatggagataccaataaatacaagaaaggacgt
aagaaagcggcttatgctggaggcttggttttggaccccaaagttggtttttatgacaag
ttcattttgctcctggatttcaacagtttatatccttccatcattcaggaatttaacatt
tgttttacaacagtacaaagagttgcttcagaggtacagaaagctgcagaggatgaggaa
caagaacagatccctgagttgccagatccaaacttagatatgggcattttgcccagagag
atccggaaactggtagagcggagaaaacaagtcaaacagctaatgaaacagcaagattta
aattcggaccttgttcttcagtatgacatccgacagaaggctttgaagctcacggcaaac
agtatgtatggttgtctgggattttcctacagcagattttatgccaaaccactggctgcc
ttggtgacatgcaaaggaagggagattttgatgcacacgaaagacatggtacagaagatg
aatcttgaagttatttatggagatacagattcaattatgataaataccaacagcaccaat
ctggaagaagtatttaagttaggaaacaaggtaaaaagtgaagtgaataaattatacaaa
ctgcttgaaatagacattgatggtgttttcaagtctctactactgctgaagaaaaagaaa
tatgctgctctggttgttgaaccaacatcagatgggaattacattaccaaacaggagcta
aaaggattagatatagttagaagagactggtgtgatcttgccaaggacactggaaatttt
gtcattgggcagattctttctgatcaaagccgggacaccattgtggaaaacattcagaag
aggttaatagaaattggagaaaatgtgctaaatggcagtgtcccagtgagccagtttgaa
attaacaaggcattgacaaaggatccccaggattaccctgataaaaaaagtctacctcat
gtgcatgttgccctatggataaattctcaaggaggccggaaggtgaaagctggagataca
gtgtcctatgtcatctgtcaggatgggtcaaacctccctgcaactcagagggcctatgca
cctgagcagctgcagaaacaggacaatttagtcatcgacacccaatactacttggcccag
cagatccaccctgtcgtggctcggatctgtgagcccatagatggaattgattctgtgctc
attgcattgtggctaggacttgactccactcagtttagagttcatcagtatcacaaagat
gaggagaatgatgctctacttggtggaccagcacagctgactgatgaagagaaatataag
gactgtgaaaaattcaaatgcctttgtcctacatgtggaactgagaatatttatgataat
gtctttgaaggctcgggaattgatatggagcccagcttgtatcgttgcagtaatattgat
tgtaaggcttcaccactcaccttcatggtacagctgagcaacaaactgatcatggacatt
agacattgcatcaaaaagtactatgattgctggttgatctgtgaggagccgacatgtcgc
agtcgcactcgacgtcttccccttcatttctcccgaaatgggcctctttgtccgacctgc
atgaaagctgtacttagacaagagtattctgacaagtccctgtacacccaactgtgcttt
taccggtacatttttgatgcggaatgtgcattggagaaacttactgaacatgagaaagat
aaattgaagaagcagttttttacccccaaagttcttcaggactacagaaaagtcaagaat
atagcagaacagttcttgtcctggagtggctactctgaagtgaacctcagcaagctcttc
ggcaattatgctgggaagtactga
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