Alexandromys fortis (reed vole): 126491542
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Entry
126491542 CDS
T08493
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126491542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126491542
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126491542
U7-dependent histone pre-mRNA processing factors
126491542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
126491542
NCBI-ProteinID:
XP_049983227
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MAGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIN
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLISGNPQPVHVAGPGSGPNVSMNQQNPQAPQAQSLGGMHVN
GATLMQASMPGGVPAPVQMAAAVAGPGPGSLAPAGVMQAQVGMQGGGPVPMERGQVPMQD
PRAAMQRGALPANVPTPRGLLGDAPNDPRGGTLMSVTGEVEPRAYLGPPPPPHQGPPMHH
VPGHEGRGPPPHDMRGGPLAEPRPLMAEPRGPMIDQRGPPMDARGGRDPRGLDARGLEAR
AMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEARAMEARGMDTRGPVPGPRGPI
PSGIQGPNPMNMGAVVPQGSRQVPVMQGAGIQAASMQGGNQPGGFSPGQSQVTPQDHEKA
ALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgcctgttagagaccctgcggtggatcgttctctgcgttctgtattcgtg
ggaaacattccttatgaagctactgaagaacagctgaaggacatcttctctgaggttgga
cctgttgttagtttcagattggtatatgatagggagacaggaaaaccaaagggttatggc
ttctgtgaataccaagaccaagagacggcgcttagtgccatgcggaacctgaacggtcgc
gaattcagtgggcgagcacttcgagtggataatgctgccagtgaaaagaacaaagaggaa
ctcaaaagccttggcactggtgcaccagtcatcgagtcaccttacggagagaccatcaac
cccgaggatgcccctgaatctattagcaaagcagttgctagtcttccaccagaacagatg
tttgagctgatgaaacagatgaagctctgtgtccagaatagtccccaggaagcacgaaac
atgttgcttcagaatcctcagctggcgtatgctttgctacaagcacaggtagtgatgaga
attgtggatcctgagattgccctgaaaattctgcatcgccagacaaatatcccaacgctg
atttcaggcaaccctcagccagtccatgttgctgggcctggctcaggacccaatgtttca
atgaaccagcagaatcctcaggcccctcaggctcaatctttgggcggaatgcatgtcaat
ggtgcaactctgatgcaagcttctatgccaggtggagtacctgccccagtgcaaatggct
gctgctgtagcaggacctggccctggttctttagcccctgcaggagtcatgcaagcccaa
gtgggaatgcaaggaggtggaccagtgcccatggaaagaggacaagtgccaatgcaagac
cccagagcagctatgcagcggggagccttgcctgccaatgtcccaactcctcgtggtctg
ttaggagatgcccccaatgacccacggggcggcactttaatgtctgtaactggagaggta
gagcctagagcttacttgggacccccaccaccacctcatcagggcccacccatgcaccat
gttcctggccatgaaggccgtggaccaccgccacatgacatgaggggaggtccattagct
gagcccagacctttaatggcagagccaagaggacccatgatagatcagaggggtccaccc
atggatgctagaggtggaagagatccccgaggattagatgcacgagggttggaggccaga
gccatggaggccagaggactggatgccagaggactggaggcccgtgccatggaggcccgt
gccatggaagcccgtgccatggaagcccgtgccatggaggcccgtgccatggaagcccgt
gccatggaggccagaggcatggataccagaggcccggtacctggacctagaggacctata
cctagtggaatccaaggtcccaatccaatgaacatgggggctgtcgttccccagggatca
agacaggtcccagtcatgcagggagcaggcattcaagcagcaagcatgcaaggtggaaac
caacctggtggctttagtcctggacagagccaagtcacaccccaggatcatgagaaggct
gctttgattatgcaggtccttcaactcactgcagaccagattgccatgctgcctcctgag
cagaggcagagtatcctaatcttaaaggaacagatacagaaatccactggggcaccttaa
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