Alexandromys fortis (reed vole): 126491943
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Entry
126491943 CDS
T08493
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
126491943
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mfot01009
]
126491943
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mfot04515
]
126491943
Protein phosphatases and associated proteins [BR:
mfot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126491943
Cell adhesion molecules [BR:
mfot04515
]
Cadherins
Protocadherins
126491943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
126491943
NCBI-ProteinID:
XP_049983908
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MPPPWGCVTLGPNAKVLLILEPAGMGPLRPSPGPRGQRLLLPPLLLALLLLLAPSAGHTT
QVVYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDRE
GLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIP
ENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNL
DRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHS
VIQVKANDSDQGANAEIDYTFHQAPEVVKRLLRLDRNTGLITVQGPVDREDLSTLRFSVL
ARDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQ
VSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVA
VDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSN
AELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATV
LVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDF
VIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAP
SNTSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEK
EIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLVHSLDTPLDIDI
AGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYA
PKPSGKAAKGSKNKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNY
PPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYS
DYSYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPR
LGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQ
SSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSS
HDSCKDSATLEEIPLTQTSDFPPTATPASAQTAAKREIYL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaccctggggctgtgtgaccctaggtcctaatgcaaaagttctcctgatcctg
gagcctgccgggatggggcctctgaggcccagccctgggccccgggggcagcggttgctg
ctgccccccttattgctggcactgctgctcctattggctccatctgcaggccataccacc
caggtagtatacaaggtgccagaagaacagccgcccaacactctcatcgggagccttgcc
gctgactacggttttccagacgtgggtcatctgtacaaactagaggtaggtgctccatac
cttcgagtggacggcaagactggcgacattttcaccacagagacctccattgaccgagag
ggactccgtgaatgccagaaccagatccctgggaacccctgtatcctggagtttgaggtg
tctatcacggacctcgtgcagaatggcagcccccggctgctagagggacagatagaggtg
caggacatcaatgacaacacacccaactttgcctctccggtcatcaccctggccatccct
gagaacaccaacatcggctcgctcttccccatcccactggccacagaccgtgatgctggc
cccaatggcgtagcatcctacgagctgcaggctgggcctgaggcccaggagctatttgga
ctgcaggtggctgaggaccaggaagagaagcagccacagctcattgtcatgggcaaccta
gaccgtgaacgctgggactcctatgacctcaccatcaaagtacaggatggcgggagtcct
ccacgagccagtagtgccctgctgcgtgtcactgtgcttgatacaaatgacaacgctccc
aagtttgagcggccatcctacgaagccgagctgtctgagaacagccccattggccactcc
gtcatccaggtgaaagccaatgactcagaccaaggtgccaatgccgagattgactatacc
ttccaccaggcgcctgaagttgtcaagcgtcttttgcgactagacagaaacactggactt
atcaccgtccagggtcctgtggaccgtgaggatctaagcactctgcgcttctcagtgctc
gccagggaccgaggcgccaccccgaagagcgcccgtgcccaggtagtcgtgactgtgaaa
gacatgaacgacaatgcccccaccattgagatccgaggcatagggctggtgactcaccaa
gatgggatggctaacatctcagaggatgtggcggaggagactgctgtggccttggtgcag
gtatctgatcgagatgaaggagagaatgcagcggtcacctgtgtcgtagcaggggatgtc
cccttccagctgcgccaggccagcgagacaggcagtgacagcaagaaaaagtactttctg
cagaccaccacccctcttgactatgagaaagtcaaagactataccattgagatcgtggcc
gtggactccggcaaccccccactctctagcaccaactccctcaaggtccaggtggtagat
gtcaatgacaatgcccctgtattcacccagagcatcactgaagtcgccttcccagaaaac
aacaagcctggggaagtggtggccgaggtcactgccagtgacgctgactccggctctaac
gcagagctggtgtattctctggaacccgagccagctgcccagggcctttttactatctca
cccgagaacggagagatccgggtgaagacgtcgctggatcgggaacagagagacagctat
gagctgaaggtggtggcggctgaccggggcagtcccagccttcagggtacagccacggtc
cttgtcaacgtgctggactgcaacgacaatgaccccaagtttatgctgagtggctacaac
ttctcggtaatggagaacatgcctgcgcttagtccagtgggcatggtgactgtcattgat
ggtgacaagggggagaatgcccgggtacagctctcagttgagcaggacaacggtgacttt
gttatccagaacggcacaggcaccatcttatccagcttgagcttcgacagggagcaacag
agtacctatacctttcaactgaaagctgtagatggtggtgtcccgcctcgctcagcgtac
gtcggcgtcaccatcaatgtgttggacgagaacgacaatgcaccctttatcaccgccccc
tccaacacgtctcaccgactgctgaccccgcagacgcggcttggtgagacagtcagtcag
gtgacggcagaggacattgactccggtgtcaatgctgagctgacctatagcatcgctggt
ggcaacccttacggactcttccagattggatcgcattcaggcgccatcaccctggagaag
gagattgaacggcgccaccacgggttacaccgccttgtggtgaaggtcagtgaccggggc
aagcccccacgctatggcacagccttggtccacctttacgtcaacgagaccttagccaac
cgcacattgctagagaccctccttgtccatagcctggacacaccactggacatcgacatc
gctggggacccagagtacgagcgttccaagcagcgtggcaacattctctttggtgtcgtg
gccggagtggttgccgtggccctactcatcgccctggcagtgcttgtgcgctactgccgg
cagcgggaggccaagagtggctatcaggctggcaagaaggagactaaggacctgtatgct
cccaagcccagcggcaaagcggccaagggaagcaagaacaaagggaagaagagcaagtcc
ccgaagcccgtgaagccagtggaggacgaggatgaggccgggctgcaaaagtccctcaag
ttcaacctaatgagcgacgcccctggggacagtccccgaatccacctgcccctcaactac
ccaccaggcagccccgacttaggccgccattaccgctccaactccccactgccttccatc
cagctacaaccccagtcaccctcggcctccaagaagcaccaggtggtgcaggacctaccg
cctgcaaacacttttgtgggcaccggggacaccacgtccacgggctccgagcagtactcc
gactacagctatcgcaccaacccccccaaataccccagcaagcagttacctcaccgccgt
gtcaccttctcggccaccagtcaggcccaggagctgcaggacccatcacagcacagttat
tatgacagtggcctggaagagtctgaaacaccatctagcaagtcatcctcagggccccga
cttggtcccctggccctccctgaggaccactatgagcgcaccacccctgacggcagcata
ggtgaaatggagcaccctgagaatgacctccgccctttgcccgacgtcgccatgacgggc
acttgtacccgggagtgcagcgagtttggtcactctgacacatgctggatgcctggccag
tcgtctcccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttac
caggaccgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccgg
aacaccaaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagc
catgactcctgcaaggactcggccaccttggaggaaattcccctgacccagacctcggac
ttcccacccacagccacaccggcatctgcccagaccgccgccaagcgtgagatctacctg
tga
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