Alexandromys fortis (reed vole): 126491986
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Entry
126491986 CDS
T08493
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03082
ATP-dependent chromatin remodeling
mfot04714
Thermogenesis
mfot05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126491986
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
126491986
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
126491986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126491986
03036 Chromosome and associated proteins [BR:
mfot03036
]
126491986
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126491986
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126491986
PBAF complex
126491986
GBAF(ncBAF) complex
126491986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
126491986
NCBI-ProteinID:
XP_049984004
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTVTEDKSNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKIHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEELTKDMDEPSPVPNVEEVTLPKA
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEDESSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQSSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVASKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQAADEKKEPKEPREGVGIAEEEAKEEASEAPKKDEEKGKEGDSEKE
SEKSDGDPAADPEKDKEPKEGQEEVLKEAVESEGERRTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQPPTLPPGSQPIPPPGAAGPPTAHGLAVA
PAAVAPAPAGGGAPPGSLGPSEQIGQAGSTAGPQQPQAAGASQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAAPSIIPFGSLADSISIN
LPPPPNLHGHHHHLPFAPGTIPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ
SPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgataacgtgcggctctggctcggcaagaactacaagaagtacatacag
gcggaaccaccgaccaacaagtccctgtcgagcctggttgtgcagttgctccagtttcag
gaagaggtttttggcaagcatgtcagcaacgcaccccttaccaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggatccctgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaacccatcccgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacattttcctgtgcccagagattgagcccaaactgctagggaaattaaaagacattgtt
aagagacaccagggaactgttactgaggacaagagcaatgcctcccatgttgtgtatcct
gtcccagggaacctagaagaagaggaatgggtacggccagttatgaagagagacaagcaa
gttcttctgcactggggctactaccctgacagttacgatacgtggatcccagctagtgaa
attgaagcatctgtggaagatgctccaacacctgagaaacctcggaagattcacgccaag
tggatcctcgacacagacaccttcaatgagtggatgaatgaggaagactatgaagtcaat
gacgacaaaagccctgtttcccgacggaagaagatctcggcgaagacgctgacagatgag
gtaaacagccccgattcagacagacgggacaagaaggggggaaactataagaagaggaag
cgctctccgtctccttcgccgaccccagaagctaagaagaagaatgctaagaaaggaccc
tcaacaccttacaccaagtcaaagcgaggccacagagaagaggagcaggaagagctgacg
aaagacatggatgagccctcgccagtcccaaacgtagaagaggtgacactccccaaagca
gtcaacactaagaaggactcggagtcagctccagttaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccgcgggcaaggatgaggacgagagcagtacg
ggcaacaagggggagcagaccaagaatccagacctgcatgaggacaacgtgaccgagcag
acccatcacatcatcatccccagctacgctgcctggtttgactacaatagtgttcacgcc
attgagcggagggctctccctgagttcttcaacggcaagaacaaatccaagactccagag
atctacctggcgtatcgaaacttcatgattgacacttaccgactgaatccccaggagtat
ctaacatccactgcctgtcggcggaacttggcgggtgatgtctgcgctatcatgagggtc
catgccttcctggaacaatggggtcttattaactaccaggtagatgctgagagccgacca
accccaatggggcctccacccacgtctcacttccatgtcttggcggacacaccatcaggg
ctggttcctcttcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcggaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagagctctgcttcccaacaaatgctcaactttcctgacaaaggcaaagagaaaccc
acggacatgcagaactttggactgcgcacagacatgtatacaaagaagaatgtcgcctcc
aagagtaaagctgcagccagcgccactcgggaatggacagaacaggagacgctgctgctc
ctggaggctctggagatgtacaaggatgactggaacaaagtgtctgaacatgtggggagc
cgcacgcaggatgagtgcatcttgcattttcttcgccttcccattgaagacccatacctg
gaggactcggaggcctccctaggccctctggcctaccagcccatccccttcagtcagtcg
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgacccccgcgtcgcc
tctgctgctgcaaagtcagccttagaagagttctccaaaatgaaggaagaggtgcccaca
gccttggtggaagcccatgtgcggaaagtggaagaagcagccaaggtcacaggcaaggca
gatcccgcctttggtctggaaagcagcggcattgcgggaaccacctctgacgagcccgag
cgcattgaggaaagtgggactgatgaggcccgggcagagggccaggcggcagatgagaag
aaggagccgaaggaaccacgggaaggagtaggtattgcagaggaagaagcgaaggaggaa
gccagtgaggctcccaagaaggatgaggagaaagggaaagaaggggacagtgagaaggag
tccgagaagagcgacggggacccggcagctgatcctgagaaagacaaggagccgaaagaa
ggacaggaggaagtgctgaaggaggcggtggagtcagagggggagaggagaacgaaggtg
gagcgagacattggtgaggggaacctctctacagctgctgccgctgccctggctgctgcc
gcagtcaaggccaagcatttggctgcggtggaggagaggaagatcaagtctttggtggcc
ctgctggtggagacccagatgaagaaactagagattaaacttcgccattttgaggagcta
gagacaataatggaccgggagcgagaagcactggagtaccagaggcagcagctcctggct
gaccggcaggccttccacatggagcagctgaagtacgcagagatgagggcccggcagcag
cacttccagcagatgcaccagcagcagcagcagcagccaccaaccctgcccccaggctcc
cagcccataccaccgcctggggctgctgggcctcccacggcccatggtctagctgtggct
ccagcagctgtggcccctgctcctgctggcggtggggcccctcctggaagcttgggccct
tctgagcagatcgggcaagcagggtcaactgcagggccacaacagccacaagcagctgga
gcctcccagcctggggcagtcccaccaggggtacccccccctggaccccacggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
ccccctgctgctccatccatcatcccatttggtagtctagctgactccattagtattaac
cttcctcctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcact
atccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccag
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gaccccggcaccccgctgcctccagaccccacagctccgagcccaggcacagtcacccct
gtgccacctccacagtga
DBGET
integrated database retrieval system
