Alexandromys fortis (reed vole): 126492411
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Entry
126492411 CDS
T08493
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126492411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126492411
Spliceosome [BR:
mfot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126492411
Complex C
U5 SnRNP specific factors
126492411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
126492411
NCBI-ProteinID:
XP_049984787
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEDSMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccttaccgagggccgggtaacccggttcccggccctctagccccg
ctgccggactacatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcagttg
caggccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgcccccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgccatgacaaaagggtctatttgggagccctcaagtacatgcctcatgccgttctc
aagctcctggagaacatgcccatgccttgggagcagattcgggacgtgcctgttctctac
cacatcactggcgccatttcctttgtcaacgagattccctgggttatcgagcctgtttat
atctcccagtggggatcgatgtggatcatgatgcgtcgagagaaaagagacaggaggcat
ttcaagaggatgcggttccccccatttgatgacgaggaaccgcccctggattatgctgac
aacatcttagatgttgagccactggaagccatccagctggagttggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagcctttgagagacagtaggaagtatgtt
aatggttccacttaccaacgctggcagtttacactgcctatgatgtccactctctaccga
ttggccaatcagcttctgactgacttggtggatgacaactacttctatctgtttgatctg
aaggccttctttacctctaaggcactcaatatggccattcctggaggacccaaatttgaa
cctcttgttcgagacatcaacctacaggatgaagactggaatgagttcaatgatattaat
aagatcatcatccgtcagcctattcgtactgagtacaagattgcttttccttacctgtat
aacaaccttccacaccatgtccacctgacctggtatcacactcctaacgttgtgttcatc
aagactgaggatcccgatttgcccgctttctactttgatcctctcatcaaccccatctct
cacagacactcagtcaagagccaggaaccactgcccgatgatgatgaggaatttgaactc
ccagagtttgtggagcccttcctgaaggacacacccctctatacagacaacacagccaat
ggcattgccctgctctgggcaccgcggccctttaacttacgctctggtcgtacccgccgg
gctctggacataccccttgtcaagaactggtatcgggaacactgtcctgctgggcagcct
gtgaaggtgcgagtctcctatcagaagctgcttaagtactatgtgctgaatgctctcaag
catcggcctcccaaagcccaaaagaagaggtatctcttccgatcattcaaagccaccaaa
ttctttcaatccacaaaactagactgggttgaggtagggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccggaagaacctcaactacctgcacttggactat
aacttcaacctgaagcctgtcaagacactcaccactaaggaaagaaagaaatctcgtttt
gggaatgccttccatctctgtcgggaagtgctgcgtctaaccaagctggtcgtggatagt
catgtgcagtatcgcttgggcaatgtagatgccttccagctggcagatgggttgcagtat
atatttgcccatgtggggcagttgaccggcatgtatcggtacaagtacaaactgatgcgg
cagatccgcatgtgcaaggacttgaagcatctcatctattaccgcttcaacacgggtcct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgagtctggctgtttttt
atgcgtggaattacccctttgctagagcgctggctgggcaacctcctggcccggcagttt
gaaggtcgtcactcaaagggggtggcaaagacagtaacgaagcagcgagtggagtcccat
ttcgacctggagctcagggcggctgtgatgcatgatatcctggacatgatgcctgaaggc
atcaaacaaaacaaggcccgaacaattctgcagcacctcagtgaggcctggcgctgctgg
aaggccaacattccctggaaggtcccagggttgccaacacctatagagaatatgattctt
cggtatgttaaggccaaggctgattggtggaccaatactgcccactacaaccgtgaacga
atccgccgtggggccactgtagataagactgtttgcaaaaagaacctgggccgcctcacc
cgcctgtacttgaaggcagaacaggaacggcagcacaattacctgaaggatgggccttac
atcacagcagaagaagcggtggcagtgtatactaccaccgtgcattggttggaaagccgc
agattctctcccatcccattccctccgctctcttacaagcacgatactaagttgctcatc
ttggctctggagcgcctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaggagctgggtttgatcgagcaagcctacgacaacccccacgaggctttgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagtttatggat
ctctatagccacctggtgccagtgtatgatgtggaacccctggagaaaataactgatgcc
tacctggaccagtatctgtggtatgaagctgataaacgccgccttttcccaccctggatc
aagcctgctgacacggaaccacctccactgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagaccagtgagggcgagtgcaatgtcatgttggagtcccgc
tttgagaagatgtatgaaaagattgacttgaccctgcttaacaggctgctgcggctcatt
gtggaccacaacatagctgactacatgacagccaagaacaacgtcgtcattaactataag
gacatgaaccatacaaattcatacgggatcatcagaggcctgcagtttgcctcgttcatt
gtgcagtactatggcttggtgatggatttgcttgtattgggattgcaccgggccagtgag
atggctgggcctcctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcgcacccaatccgactcttctgtagatacattgatcgcattcatattttcttcagg
ttcacagcggatgaggctcgggatttgatccagcgttacctgacagagcatccagacccc
aacaatgaaaacattgttggctacaataacaagaaatgctggccccgggatgcccgcatg
cgcctcatgaaacatgatgtcaacttgggtcgggcagtgttctgggacattaaaaaccgg
ctgccacgatcagtgactacggtgcagtgggagaacagctttgtgtctgtgtacagtaaa
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaagtgt
cgtaccagctatgaagagttcacccacaaggacggggtctggaacctgcagaatgaggtt
accaaggagaggacagcgcagtgtttcctgcgtgtggatgatgagtcgatgcaacgcttc
cataaccgagtgcgtcagattctaatggcctctggctccaccacctttaccaagattgtg
aataagtggaatacagctctcatcggccttatgacatattttcgagaggctgtggtgaac
acgcaggaactcctagacttattggtaaagtgtgaaaacaagatccagacacgtatcaag
attggattgaactccaagatgccaagtcggttcccccctgttgtgttctacacccctaag
gagctgggtgggcttggcatgctctccatgggccacgtgctcatcccccagtctgatctc
aggtggtctaagcaaacagatgtgggtatcacacacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaacttgtaccgctacatacagccctgggagagcgagttcatt
gactctcagcgcgtctgggctgagtatgcactcaagagacaggaggctattgctcagaac
agacggctgactttagaagatttagaagattcatgggatcgaggcattccacggatcaat
acccttttccagaaggaccggcacacattggcttatgataagggctggcgtgtccgaact
gactttaagcagtaccaggttctgaagcagaaccctttctggtggacacaccagcggcat
gacggcaagctctggaacctcaacaactaccgcacagacatgatccaggccctgggtggt
gtggaaggcattctggagcacactctcttcaagggcacatacttccctacctgggaaggt
ctcttctgggagaaagccagtggctttgaggattccatgaagtggaagaagctgaccaat
gctcagcgatctggattaaaccagattcctaatcgtagattcaccctctggtggtcccca
acaatcaatcgagccaatgtatatgtaggctttcaggtgcagctggacttgacaggaatc
ttcatgcatggcaagatccccacactgaagatctccctcatccagatattccgagctcac
ctgtggcagaagatccatgaaagcatcgtgatggacttatgtcaggtctttgaccaggaa
ctggatgcactggaaatcgagacagtacagaaggagacaatccatccccgaaagtcctat
aagatgaactcttcctgtgcggacatcctactcttcgcttcctataagtggaatgtctcc
cggccctcgctgctggcagactccaaggatgtgatggacagtacaactacacagaagtat
tggattgacatccagttacgttggggcgactatgattcccacgatattgagcgctatgcc
cgggccaaattcctggattataccacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccattgacctggcctacaatctacacagtgcctatggaaactggtttcca
ggcagcaagcctctgatacagcaggccatggccaagatcatgaaggcaaacccggccttg
tatgtgttacgtgagcggatacgcaaaggactgcagctgtattcatcagagcccactgag
ccttatctgtcctcccagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgacaccaatgtctatagagtgactatccacaagacctttgaggggaacttgacaacc
aaacccatcaatggggccatcttcatctttaacccacgcacggggcagcttttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtttgggtcagttggccaagtggaag
acagctgaggaagtggctgccctgatccgatctctgcctgtggaggaacagcctaaacag
atcattgtcaccaggaagggcatgctggatccattggaggtacacttgctggacttcccc
aacattgtgatcaaaggttcggagctccagctccccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccacagaaccccagatggttctcttcaacctctac
gatgactggctcaaaactatctcatcttacacggctttctctcgtctcatcctgattctg
cgtgctctgcacgtgaacaacgatcgggcaaaggtgatcctgaagccagacaaaaccact
atcacagaaccacaccacatctggcccacgctgaccgacgaggagtggatcaaggtggag
gtgcagctcaaggacctgatcttggcggactatggcaagaagaacaacgtgaacgtggcg
tccctgacacaatcagaaatccgagacattatcctaggaatggagatctccgctccatca
cagcagcgccagcagatagctgagattgagaagcagaccaaggaacagtcacagctcact
gccacgcagactcgaactgtcaacaaacatggcgatgagattatcacctccaccactagc
aactatgaaacccagaccttctcatcaaagactgaatggagggtcagggccatctctgct
gccaacctgcatctacggaccaatcacatttatgtttcatctgatgacatcaaggagact
gggtatacttacattcttcccaagaatgtgcttaagaagttcatctgcatatctgatctc
cgtgcccaaattgcaggatacctatatggggtgagtcctccagataaccctcaggtgaag
gagatccgctgtattgtgatggtgccgcagtggggcactcaccagactgtgcacctgccc
agccagctgccccagcacgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtctccccagttatcaccccaagatgtcaccactcatgccaagatcatg
gctgacaacccgtcctgggatggcgagaagacaattatcatcacctgtagcttcacccca
ggctcctgcacactgacagcctacaagctgacccccagtggctatgagtggggccggcag
aacaccgacaaaggcaacaatcccaaaggctacctgccctctcactacgagagggtgcag
atgctcctgtcagaccgattcctcggcttctttatggttcctgcccagtcctcctggaac
tacaactttatgggtgttcggcatgatcccaacatgaaatatgagctgcagctggcaaac
cccaaggaattctaccatgaggtccataggccctcccacttcctcaactttgccctcctg
caggagggtgaggtctattctgcagacagagaggatctctatgcctag
DBGET
integrated database retrieval system
