Alexandromys fortis (reed vole): 126493087
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Entry
126493087 CDS
T08493
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126493087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126493087
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126493087
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126493087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
126493087
NCBI-ProteinID:
XP_049985835
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTVRVWGAPEPLSSLKSMAERAA
ISSGIEDPVPTLHLTERDIILSSTSAPPTSAQPPLQLSEVNIPLSLGVCPLGPVSLTKEQ
LYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETL
FFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEK
WGQRKKEGFTFEYRYLEDRDLQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaaaaggcagcttatcgaaaac
cgcaagctcattgaaacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggagggcctaggtctggctcagaaggtggaccctgctcagaaggag
aaggaagaggttggccagtggctcacgaacaccattgacaccctaaatatgcaggtggac
cagtttgagagtgaggtggagtcactgtcggtacagacacgcaagaagaagggcgacaag
gataagcaggaccggattgagggcttgaagcggcacatcgaaaagcaccgctaccatgta
cgcatgctggagaccattctgcgcatgctggacaatgactccatcctggttgacgccatc
cgaaagatcaaggatgacgtggagtactacgtcgactcatcccaggaccctgactttgag
gagaacgaattcctctatgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccacccagccacagccacatggaggatgagatcttcaaccagtccagcagcact
cccacctcaacaacttccagctctcccatcccacccagcccagctaactgcactacggtg
agggtctggggtgcccctgaacctctgagctctctgaaatccatggcagaacgggcagct
atcagctctggtattgaggacccagtgccaaccttacacctaacagagcgagacatcatc
ctgagcagcacatcagcaccccccacctcagcccagccacccctgcagctctcagaggtg
aacataccattgtcactgggtgtgtgtccactggggccagtgtccctcaccaaggagcag
ctctaccagcaggccatggaagaggccgcctggcaccatatgccccacccctctgactca
gagcgcattcggcaatacctcccccggaacccttgcccgacgcccccctaccaccaccag
atgccacccccacactcggacaccgtggagttctaccagcgcctgtcaactgagacactc
ttcttcatcttctactatctggagggaaccaaggcacagtacttggcagccaaggcccta
aagaagcagtcctggcgattccacaccaagtacatgatgtggttccagaggcatgaggag
cccaagaccatcaccgatgagtttgagcagggcacctacatctactttgactacgagaag
tggggccagcggaagaaggaaggcttcacctttgagtaccgctacctggaggaccgggac
ctccagtga
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