Alexandromys fortis (reed vole): 126493717
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Entry
126493717 CDS
T08493
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03022
Basal transcription factors
mfot03420
Nucleotide excision repair
mfot05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126493717
09124 Replication and repair
03420 Nucleotide excision repair
126493717
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126493717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126493717
03400 DNA repair and recombination proteins [BR:
mfot03400
]
126493717
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126493717
DNA repair and recombination proteins [BR:
mfot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126493717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
126493717
NCBI-ProteinID:
XP_049986766
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVMSQVISAEEFWANRLNVNATDSSTSNYKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAETVPHNMTEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKIDEKGLKTMVSLGVKNPMLDLTALEDKSLDEGYGICSLPSTSNSKSIKENSNA
AIIKRFNHHSAMVLAAGLRKQQAQNGQNGEPSSIDGNSGDTDCFQPAVKRAKLQESIEYE
DLGNNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPNLTQV
LSSSAASSTIAALSPGGALMQGGTQQAVNQMVPNDIQSELKHLYVAVGELLRHFWSCFPV
NTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHSWQS
RRLMKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagtgttgctgatagtgaagaaggttcgtcagaagaagcag
gatggagcactgtacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcaacttcagctggtcctgcatgcgggggacacaacaaacttccatttttcc
aatgaaagcacagcggtgaaagaacgggatgcagtgaaggacctgcttcagcagttactg
cccaagttcaagcggaaagccaataaagaactggaagaaaagaacagaatgctccaagaa
gatccagttttattccagctctataaagaccttgttatgagccaagtaatcagtgctgag
gaattctgggccaatcgtttaaatgtgaatgcaacagatagttctacatccaattacaag
caggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatggctgt
aatggtttgagatataatttaacttctgatatcattgaatctatatttaggacctatcca
gcagtaaaaatgaaatatgcagaaactgtaccacacaacatgacggaaaaggagttctgg
acacgtttcttccagtctcattattttcacagggaccgactaaatacaggatcaaaggat
ctctttgcagaatgtgccaaaatagatgaaaagggattaaaaacaatggtttcattagga
gtaaaaaacccaatgctagatttgacagctttggaagataaatcgttagatgagggttat
ggcatttgctctttaccatctacttccaattccaaatccataaaggaaaatagtaatgct
gccatcatcaaaaggtttaaccaccatagtgccatggtcctggctgctggtctcaggaaa
caacaagcacaaaatggacagaatggtgagcccagcagcatagatggaaattctggagat
acagactgctttcagccagcagtcaaaagggcgaagttacaggagtccattgaatatgaa
gacttgggaaacaacaattctgtgaaaacaattgcactgaatctcaagaagtcagacagg
tattatcatggtcctactccaattcagtcattacagtatgcaacaagtcaggacattatt
aattcttttcaaagtattagacaagaaatggaagcttatacacccaacttaactcaggtt
ctctcaagcagtgctgctagcagcaccatcgcagccctgtcacctggaggagcacttatg
caaggagggacacagcaagccgtaaaccagatggtgccaaacgatattcagtctgaactg
aaacacttgtacgtggctgttggagaacttctgcggcatttctggtcctgctttcctgtt
aatacaccattcctagaagaaaaggtagtgaaaatgaagagtaatttggaacggttccaa
gttacaaagctctgcccattccaagaaaagattcggaggcagtatttaagcacaaatctg
gtaagtcatatagaagagatgctgcaaacagcctacaacaagctccactcgtggcaatca
aggcgtctgatgaagaagacgtga
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