Alexandromys fortis (reed vole): 126494411
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Entry
126494411 CDS
T08493
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03022
Basal transcription factors
mfot03420
Nucleotide excision repair
mfot05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126494411
09124 Replication and repair
03420 Nucleotide excision repair
126494411
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
126494411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126494411
03400 DNA repair and recombination proteins [BR:
mfot03400
]
126494411
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126494411
DNA repair and recombination proteins [BR:
mfot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126494411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
126494411
NCBI-ProteinID:
XP_049987733
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MESAPARGGLNRAHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTSAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcccctgcaaggggtggactgaaccgagcacacctacaatgtaggaatcta
caggagttcttagggggcctgagccctggggtgctggaccgattgtatgggcacccagcc
acttgtctggctgtcttcagggagctcccttctctggcgaagaactgggtgatgcggatg
ctttttctggagcagcctctgccgcaggctgcagtggccctgtgggtgaagaaagagttc
agcaaggctcaggaggagagtacagggctccttagtggcctccgcatttggcatacgcag
ctgctccctggtggactccagggcctcatcctcaaccccatcttccgccagaacctccga
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgcccgggatgtcccctcgcttgacaagtacgccgaggagcgctgggaggtggtc
ttgcacttcatggtaggctcccccagtgcagccgtcagccaggacctggcccagctcctc
agccaggctgggcttatgaaaagcgctgaacctggagagccaccctgcatcacttctgct
ggcttccagttcctgctgctggacacgtctgcccagctctggtacttcatgctgcagtat
ctgcagacagcgcagagtcggggcatggacctagtggagattctctccttcctcttccag
ctcagtttctctactctgggcaaggactactccgtagagggtatgagtgattctttgttg
aacttcctgcaacacctgcgtgagttcggactcgttttccagaggaagaggaagtcccgg
cgttactaccccacgcgcctagccatcaacctctcgtctggcgtctctggggctgggggc
actgtgcaccagccgggcttcattgtcgtggaaaccaattaccgactgtatgcctatacc
gagtcggagctgcagatcgctctcatcgccctcttctccgagatgctctatcggttcccc
aacatggtggtggcacaggtgacccgggagagcgtgcagcaggccattgccagtggcatc
acagcccagcagataatccatttcctaaggacaagggcccatccagtgatgctcaaacag
actcctgtgctgcctcccaccataacagaccagattcggctgtgggagctggagagggac
agacttcgtttcactgaaggcgtcctgtataaccagttcctgtcgcaagtggactttgag
ctgctgctggcccacgcgcgggagctgggcgtgctggtgttcgagaactcggccaagcgg
ttgatggtggtgacgccggctgggcacagcgacgtcaagcgcttttggaagcggcagaag
cacagctcctga
DBGET
integrated database retrieval system
