Alexandromys fortis (reed vole): 126494893
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Entry
126494893 CDS
T08493
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2 isoform X1
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126494893
09123 Folding, sorting and degradation
03018 RNA degradation
126494893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126494893
03041 Spliceosome [BR:
mfot03041
]
126494893
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126494893
mRNA degradation factors
5'-3' decay
Lsm complex
126494893
Spliceosome [BR:
mfot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126494893
Complex C
U2 snRNP components
126494893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
126494893
NCBI-ProteinID:
XP_049988342
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctactcctttttcaaatccctcgtgggcaaggatgtggtcgtggaactcaag
aatgacctaagcatctgtggaaccctgcactccgtggaccagtatctcaatatcaaactg
acggacatcagtgtcacggaccctgagaagtacccgcacatgttatccgtcaagaactgc
ttcatcaggggctcagtggtccgctatgtgcagctgccagcagacgaggtggacacacag
ctgctgcaggatgcagccaggaaggaagcccttcagcagaaacagtga
DBGET
integrated database retrieval system
