Alexandromys fortis (reed vole): 126495190
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Entry
126495190 CDS
T08493
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04140
Autophagy - animal
mfot04148
Efferocytosis
mfot05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126495190
04148 Efferocytosis
126495190
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126495190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mfot04131
]
126495190
Membrane trafficking [BR:
mfot04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126495190
Hops complex
126495190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-RING_Vps41
zf-RING_16
zf-C3HC4_2
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
126495190
NCBI-ProteinID:
XP_049988742
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQTGCPTVGIPHSGYVNAQLEKEAPIFTKQRIDFTPAERITSL
VVSCNQLCMSLGKDTLLRIDLGKASEPNRVELGRKDDAKVHKMFLDHTGSHLLVALSSTE
VLYMNRNGQKVRPLARWKGQLVESVGWNKALGNENSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFISRAVDDAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPAGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPTERTQATLLTTWLTELYLSRLGALQGDPDALNLYRDTRECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLAGHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQAKLEELQR
KLGAAPPPTKGSAKAKEAEAGASAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQHYEEEHRSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtatgaggactcactgtcccgctcggccgtcttgcagact
ggttgccctactgtgggcatcccccattctgggtacgtaaacgcgcagctggagaaggaa
gcgcccatcttcacgaagcagcgcatcgacttcactccagcagagcgcatcaccagcctt
gtggtctcctgtaatcagctctgcatgagcctgggcaaggatacgctgctccgcattgac
ctgggcaaggcaagtgaacccaaccgtgtggaactggggcgcaaggatgatgccaaagtt
cacaagatgttcctggatcacactggctctcacctgctggttgctctgagcagcactgag
gtcctctatatgaaccggaatgggcagaaggtccggccattggcacgctggaaggggcag
ttggtggagagtgtaggctggaacaaagccctgggcaacgagaacagcactgggcccatc
ctggtcggcacagcccaaggacagatctttgaagcagagctctctgccagcgaaggtggc
ctttttggccccgccccggatctctacttccggccgctgtatgtgttaaatgaagaaggg
ggtcccgcacccgtgtgctcccttgaggctgagcgcggccctgatgggcgaggctttgtc
atcgccaccactcggcagcgcctcttccagttcataagccgcgcggtagacgatgctgaa
gcccagggcttctcaggcctctttgctgcctatacggaccacccgcccccattccgtgag
tttcctagcaatttggggtatagtgagttggctttctatacccccaagttacgctctgcg
cctcgtgccttcgcctggatgatgggagacggtgtgctgtatggctccctggactgcgga
cgtcctgattcgctgctgagcgaggagcgcgtgtgggaatatccagcgggggtcgggcct
ggggccagtccacccctagccatcgtcttgacccagtttcattttctgctgctgctggca
gaccgggtggaggctgtgtgtaccctgacagggcaggtggtacttcgggatcacttcctg
gagaagtttggaccactgaggcacatggtgaaggactcgtccacaggtcacctctgggcc
tacactgagcgtgcggtcttccggtaccacgtgcagcgcgaagcccgggatgtctggcgc
acgtacctggacatgaaccgttttgacctggccaaagagtattgtcgagagcggccagac
tgcctggacacagtcctggcccgagaggccgatttctgcttccgccagcaccgctacctg
gagagcgcccgctgttatgctctgacccagagctacttcgaggagattgccctcaaattt
ttggaggcccggcaagaagaggcactggccgagtttctacagcggaaactggccggcttg
aagccaacggagcgtacccaggccacactgctaaccacttggctgacggagctctacctg
agccggcttggtgccctgcagggtgacccggatgctctgaatctctaccgggatacccgg
gaatgcttccgcacctttctcagtagccctcggcacaaggagtggctctttgccagccgg
gcctctatccacgagctgctcgccagtcatggggacacagagcatatggtgtacttcgcg
gtgatcatgcaggactatgaacgggtggtggcctaccactgccagcacgaggcctatgag
gaggccctggctgtccttgccggccaccgggacccccagctcttctacaaattctcaccc
atcctcatccgacatatcccccgccagctagtggatgcctggattgagatgggcagccgc
ctggacgcccggcagctcatccctgccctggtgaactatagccagggtggagaggctcag
caggtgagccaggccatccgctatatggaattctgcgtgaatgtcctcggggagactgag
caagccattcacaactacctgctgtcgctgtatgcccgtggccagccagcctcgctgctg
gcctacctggagcaagctggggccagcccgcaccgtgtgcattatgacctcaagtacgca
ctccgactctgtgccgagcatggtcaccaccgcgcttgtgttcacgtctataaggtgctg
gagctgtatgaagaagctgtggacctggccctgcaggtggatgtggacctggccaagcag
tgtgcagacctgcccgaggaggacgaggagctgcgcaagaagctgtggctgaagatcgct
cggcacgtggtgcaggaggaggaggatgtgcagacagccatggcctgcttggccagctgc
cccctgctcaagatcgaggacgtgctgcccttcttccccgacttcgtcaccatcgaccac
ttcaaggaggccatctgtagctccctgaaggcctacaaccaccacatccaggagctgcag
cgggagatggaggaggccacggccagtgcccagcggatccgccgagacttacaggagctg
cggggacgctatggcactgtggagcctcaggacaagtgctccacctgtgacttccctctg
ctcaaccgacccttttacttgttcctctgtggccacatgttccatgccgactgtctcctg
caggccgtgaggcccggcctgcctgcctataagcaggccaagcttgaggagctgcagcgc
aagcttggggctgcccctcctcccaccaaaggctcggccaaggccaaagaggccgaagct
ggggcttcagctgggggtcccagccgggagcagctcaaggctgacctggacgaactggtg
gctgcagagtgtgtgtactgtggggagctgatgattcgctccattgaccggcccttcatt
gacccccagcactatgaggaggaacaccgcagctggctgtag
DBGET
integrated database retrieval system
