Alexandromys fortis (reed vole): 126495467
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Entry
126495467 CDS
T08493
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03040
Spliceosome
mfot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126495467
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126495467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126495467
04121 Ubiquitin system [BR:
mfot04121
]
126495467
03400 DNA repair and recombination proteins [BR:
mfot03400
]
126495467
Enzymes [BR:
mfot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126495467
Spliceosome [BR:
mfot03041
]
Complex B
Other components
Prp19 complex
126495467
Complex C
Prp19-CDC5 complex
126495467
Ubiquitin system [BR:
mfot04121
]
Ubiquitin ligases (E3)
U-box type E3
126495467
DNA repair and recombination proteins [BR:
mfot03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
126495467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR41
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
eIF2A
Beta-prop_Nup120_160
PROPPIN
Beta-prop_ACSF4
Cytochrom_D1
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_VPS8
RMC1_N
B-prop_COPA_B_2nd
DUF1830
Tricorn_2nd
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
126495467
NCBI-ProteinID:
XP_049989003
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MLHSFTLRQQLQTTRQELSHALYQHDAACRVIAHLTKEVIAAREALATLKPQAGLIVPQA
VPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEDLS
KYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSIEQILATLKGHTK
KVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSS
DDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNV
ANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQ
SGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacagcttcacccttcgccagcagctgcagacaacccgccaggagctgtcgcat
gctctgtaccaacacgatgctgcctgcagagtcattgcccatctcaccaaggaagtcatt
gctgctcgagaagctctggctactctgaaaccacaggctggtcttattgtacctcaggca
gtgccaagctcacagcccagtgttgtgggtgcaggagaacccatggatttgggtgagctg
gtgggaatgacccctgagattatccagaagcttcaagacaaggctactgtgctaaccacg
gagcgtaagaagagaggaaagactgtgcctgaggagctagtgaaacctgaagatctcagc
aagtaccggcaggtggcatcccatgtggggctacacagtgctagcattcctgggatcctt
gctctggacctctgtccttcagacaccaacaagattctcactggtggagcagacaaaaac
gttgttgtctttgataagagtattgagcaaatcctggccactctcaaaggccataccaag
aaggtcaccagcgtggtgtttcatccttctcaagaactggtgttttctgcatccccagat
gccactatcaggatttggtcggtcccaaacacctcttgtgtacaggttgttcgggcccat
gagagcgcagtgacaggcctcagcctccatgctactggagactatctcctgagctcctct
gatgatcagtactgggccttctctgacatccagacagggcgtgtgctcaccaaggtgaca
gatgagacatccggctgctctcttacctgtgcacagttccaccctgatggactcatcttt
ggaacaggaaccatggactcccagatcaagatctgggacttgaaggagcgtaccaatgtg
gccaactttcctggccactctggccccattaccagcatcgccttctctgagaatgggtac
tacctggccacagcagctgatgactcttcagtcaagctctgggacttacgcaagctgaag
aacttcaagacattgcagctggacaacaactttgaggtgaagtcactgatctttgaccag
agtggaacctacctggctcttgggggtacagatgtccagatctacatctgcaaacagtgg
acagagattcttcactttacagagcatagtggcctgaccactggagtggcctttgggcac
cacgccaagttcatcgcttcaacaggcatggacaggagcctcaaattctacagtctgtag
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