Alexandromys fortis (reed vole): 126496843
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Entry
126496843 CDS
T08493
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126496843
09122 Translation
03013 Nucleocytoplasmic transport
126496843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126496843
03041 Spliceosome [BR:
mfot03041
]
126496843
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126496843
Spliceosome [BR:
mfot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126496843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_EML_2
WD40_Gbeta
NBCH_WD40
WDR54
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
TIG
Beta-prop_DCAF4
Phage_zn_bind_6
Motif
Other DBs
NCBI-GeneID:
126496843
NCBI-ProteinID:
XP_049990444
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MEHAAPSPVPLGQAEIFQALQRLHMTIYSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFHAHDGPVYSMVSTDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRDRS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGSCVNHWQLSGELKAQVPASSPGL
LSLSLNQQPAAPECKVLTASGNSCRVDVFTNLGYRAFSMSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgccgcaccgtccccggtgcctctgggtcaggctgagatctttcaggccctg
cagcgactgcacatgaccatctactcccagagtgtctcaccctgtgggaagttcctggca
gctggcaacaattatgggcagattgccatcttcagtttgtctgctgccttgagttcagag
gccaaagaagaaagcaaaaaacccatggtgaccttccacgcccacgatgggcctgtctat
agcatggtctccacggatcggcatctccttagtgctggcgatggggaagtgaagggctgg
ctttgggcggaaatcctcaagaagggctgtaaggaactgtggcgtcgtcagccaccatac
aggaccagcctggaagtacctgaaatcaacgccttgctgcttgtccccaaggagaattca
ctgattctagccgggggagattgccagctgcacactatggacctggaaactgggaccttc
acacgggcccttcggggccacacagactacatccactgcctggcactgagggaccgcagc
cctgaggtgctgtctggtggtgaggatggagctgtgcggctttgggatctccgtatagcc
aaagaggttcagaccattgaagtctataagcatgaggagtgctcgaggccccacaatggg
cgctggattggatgtttggctactgactcagactggatggtctgtggaggcggcccagcc
ctcaccctctggcacctcaggtcttccacgcccaccactgtctttcccattcgggcaccg
cagaagcatgtcaccttctaccaggacctgatcctgtctgctggccagggctcttgtgtc
aaccactggcagctgagtggggagcttaaggcccaggtgcctgcttcttccccagggctg
ctcagcctaagcctcaaccagcaaccagcagccccagagtgcaaggtcctgactgcttca
ggcaatagctgtcgagtggatgtcttcaccaacctgggctaccgcgccttctccatgtct
ttctga
DBGET
integrated database retrieval system
