Alexandromys fortis (reed vole): 126497157
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Entry
126497157 CDS
T08493
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04010
MAPK signaling pathway
mfot04020
Calcium signaling pathway
mfot04713
Circadian entrainment
mfot04925
Aldosterone synthesis and secretion
mfot04927
Cortisol synthesis and secretion
mfot04929
GnRH secretion
mfot04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
126497157
04020 Calcium signaling pathway
126497157
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
126497157
04925 Aldosterone synthesis and secretion
126497157
04927 Cortisol synthesis and secretion
126497157
09159 Environmental adaptation
04713 Circadian entrainment
126497157
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
126497157
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126497157
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
126497157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
126497157
NCBI-ProteinID:
XP_049991009
LinkDB
All DBs
Position
Unknown
AA seq
2375 aa
AA seq
DB search
MTEGTLAADEVRVPLGASPPAPAAPARASPASPGAPGREEQRGSGSGVLAPESPATECGA
DLGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHISMLVIMLNCVTLGMF
RPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVM
AGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLDSTFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQ
KCSHIPNRRELRVQCTLGWEAYGQPQTEDGGAGRNACINWNQYYNVCRSGEFNPHNGAIN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIFRKVKRRSLRLYA
RWQSRWRKKVDPSSTLHGQGPGRRPRRPGRRTASVHHLVYHHHHHHHHHYHFSHSGPRRP
SPELGAGDTRLVRACVPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVARSIATAA
SLKLASGLGTMNYPTILPSGTVNSKGATSPRFKGLRGAGTPGPAARSPQSLGSPSPYEKI
QHVVGEQGLGRASSHLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFDFSGSESG
DSDAHGVYEFTQDVRHGDCRDPVQQPNEVDTPGRGSERRRPPRRPASEPGGLGRLWASFS
GKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALEISNIVFTSMFALEMLLK
LLACGPLGYIRNPYNIFDGIVVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDTDEDKTSTHLEEDFEKLRDLQATEMKMYSLAVTPNGHLEGRGSLPPPLITHTAAT
PMPTPKSSPHLDVAHVLLDPQHSSSGPVDPQLGDQKSPASLRSSPSTPWGPNSAGSSRRS
SWNSLGRAPSLKRRSQCGERESLLSGEGKGSTDDEAEDGRPGAGAHPEALPGPRATPLRR
AESLDHRSTLDLCHSPRPAALLPTKFHDCNGQMVALPSEFFLRIDSHKEDAAELDDDIED
SCCFRLHKVLEPYAPQWCRSRESWALYLFPPQNRLRVSCQKVIAHKMFDHVVLAFIFLNC
VTIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGEHAYLQSSWNVLD
GLLVLVSLVDIIVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLR
PIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGSDTRNITTKAECHAAHYRWVRRKYNFD
NLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLN
MFVGVVVENFHKCRQHQEAEEARRREEKRLRRLERRRRSKAAPEVAEAQRRPYYADYSHT
RRSIHSLCTSHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAAL
KLVAFGFRRFFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVL
KLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLS
RHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPALSPVYFVTFVLV
AQFVLVNVVVAVLMKHLEESNKEAREDAEMDAEIELEMAQGSAAQPPSVAQESPGTQPDS
PNLLVVRKVSVSRMLSLPNDSYMFRPVAPAIVPHPHPLQEVEMETYAGSVPLGPVTSAHS
PPLEPRASFQVPSTASSPARASDPLRALSPRGTPRSLSLSRILCRQEAMHTESLEGQVDD
AGEENIPDHTEPAENTSTRQVPLGSLRSPPCSPRPASVRTRKHTFGQRCISSRPPTLGGD
EAEAADPADEEVSHITSSAHPWSATEPHSPEASPTASPAAKGAVGSGRDPRRFCSVDAQS
FLDKPGRADVQRWPSVELDSGDSHLESGEGRSRASELEPALGARRKKKMSPPCISIEPPA
EDEGSSRPPAAEGGNTTLRRRTPSCEAALHRDCPEFTEGPGAGGDAVAKGERWGQASCRA
EHLTVPNFAFEPLDKGGPGGDSFLDSDQSMTTEPRVSLSGAIVPLVHHETEPSVPSGDPP
EKGQGLYLTVPQAPLKKPGSPPATPAPDDSGDEPV
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcacgctggcggcggacgaggtccgggttcccctgggcgcttcgcctccg
gcccctgcagcgccggcgagggcttccccagcgagccctggggcgccggggcgcgaggag
cagcgaggatccgggtccggcgtgttggctcctgagagcccagcgaccgagtgtggtgcg
gacctgggcgccgacgaggaacagcccgtcccatacccggcactggcggccacggtcttc
ttctgccttgggcaaaccacgcggccgcgcagctggtgcctccgactggtttgtaacccg
tggttcgagcacatcagcatgctggtcatcatgctgaactgtgtgacactcggcatgttc
cggccctgcgaggatgttgagtgccgctcagagcgttgcagcatcttggaggcctttgac
gacttcatctttgccttcttcgctgtggagatggttatcaagatggtggctttggggctg
tttgggcagaagtgctatctgggtgacacctggaacaggctggacttcttcattgtcatg
gcgggcatgatggagtattctctagacggacacaatgtgagcctctccgccatccgcacg
gtgcgtgtgctgcggcccctccgcgccatcaatcgggtccccagcatgcggatcctggtc
actctgctgctggacacgctgcccatgcttgggaatgtccttctcctctgcttcttcgtc
ttcttcatcttcggcattgttggggtccagctctgggctggcctgctgcggaaccgctgc
ttcctggacagcaccttcgtcaggaacaacaacctgaccttcctgcgtccatactaccaa
acagaagagggtgaggagaaccctttcatctgttcctcacgccgcgacaatggcatgcag
aagtgctcgcacatccccaaccgtcgtgagcttcgtgtgcaatgcactcttggctgggag
gcctacgggcagccacagactgaggatgggggtgctggccgcaatgcctgcatcaactgg
aaccagtactacaacgtgtgccgctcaggggaattcaaccctcacaacggcgccatcaac
tttgacaacatcggctatgcttggatcgccatctttcaggtcatcaccctggagggctgg
gtggacatcatgtactacgtcatggacgcccactcgttctacaacttcatctacttcatc
ctgctcatcattgtgggctccttcttcatgatcaacctgtgcctggtggtgatcgccacg
cagttctcggagacaaagcagagggaaaaccagctgatgcgtgaacagcgggcccgctat
ctgtccaacgacagcacgctggccagcttctcagagcccggcagctgctacgaggagctc
ctcaagtacgtgggccacatcttccgcaaggttaagcgccgcagcctgcgcctttacgcc
cgctggcagagccgctggcgtaagaaggtggaccccagcagcaccctgcatggccaaggc
cctgggcggcggccacggcggccaggcaggcgcacggcttctgtacaccacctggtttac
catcaccaccaccaccatcatcaccattaccacttcagccacagtggcccgcgccggccc
agcccagagctgggtgccggtgacaccaggttggtccgggcctgtgtgcccccatcgcca
ccatccccaggccatgggccaccagactctgagtctgtgcacagtatctaccatgctgac
tgccatgtggaggggccacaggagagagcccgggtggcacgctccatagccactgctgcc
agtctcaagctggcctcaggtttgggcaccatgaactaccccaccatcctgccttcagga
acagtcaacagcaaaggtgccaccagcccacgcttcaaggggctccggggtgccggaacc
ccgggtcctgcagctcgaagtcctcagagcctgggcagccccagcccctacgagaagatc
cagcatgtggttggggaacaaggactaggccgagcctctagccacctgtcgggtctgagc
gtgccctgccccctgcccagcccccaggcgggcacactgacctgtgagctgaagagctgc
ccatattgtgccagtgccctggaggaccctgagtttgacttcagtggctcagagagtgga
gactcagatgcccacggagtctatgagtttacgcaggatgtgcgacatggggattgccgg
gacccggtgcagcagcccaatgaagtggacacgccaggtcgaggcagtgagaggcggcgg
ccaccacgacggccagcctcagagccaggagggctaggccgcctctgggcttccttcagt
ggcaagctgcgtcgcatcgtagacagcaagtacttcaacaggggcattatggctgccatc
cttgtcaacactctgagcatgggcgttgagtatcatgagcagcctgatgagctgaccaat
gccctggagataagcaatatcgtgttcaccagcatgttcgccctggagatgctgctgaag
ctgctggcctgtggcccgctaggctacatccggaacccctacaacatcttcgacggcatt
gtggttgtcatcagcgtctgggagatcgtggggcaggcggatggtggcctgtccgtgctc
cgcacgttccggctgctgcgggtgctgaagctggtgcgtttcctgccggccctgcggcgg
cagctggtggtgctcatgaggaccatggacaacgtggccaccttctgcatgctgctcatg
ctcttcatcttcatcttcagcatcctgggaatgcacctgtttggctgtaagttcagcctg
aagacagactctggagacacggtccctgaccggaagaactttgactccctgctgtgggcc
atcgtcactgtgttccagatcctgacacaggaagactggaacgtggtcctctacaacggc
atggcttccacctcttcctgggctgccctttacttcgtggccctgatgacctttgggaac
tacgtgctcttcaacctgctggtagccatcctggtggaaggcttccaggcagagggggat
gccaccaggtctgacacggatgaggacaagacatctacccacttagaggaagattttgag
aagctcagagatcttcaggccacagagatgaagatgtactcactggctgtgacccctaac
gggcacctagagggccggggcagcctaccgcctcctctcatcacacacacagcagctacg
cctatgcccactcccaagagctccccacacctggatgtggcccacgttctcctggaccca
cagcacagcagcagtggtccggtggacccccagctgggggaccagaagtctccggccagc
ctccgcagttcccccagcaccccgtggggccccaacagcgctggaagcagccgccgctcc
agctggaacagcctgggccgcgcacccagcctcaaacgccgcagccagtgtggggagcgc
gagtcgttgctctcgggtgagggaaagggcagcacagacgacgaggccgaggacggcaga
ccaggcgcaggagcccacccagaagccttgccagggccccgtgccaccccactgaggcgg
gccgagtcactggaccaccgcagcactctggacctgtgtcacagcccgcggcccgctgcc
ctcctacccaccaagttccacgactgcaacgggcagatggtggctctgccaagcgagttc
ttcctgcgcatcgacagccacaaggaggatgcggccgagttggatgatgatatagaggat
agctgctgcttccgcctacacaaagtgctagaaccctatgcaccccagtggtgtcgcagc
cgggagtcctgggccctgtacctcttcccaccgcagaacaggctacgcgtctcctgccag
aaggtcattgcacacaagatgtttgaccatgtggtccttgccttcatcttcctcaactgc
gtcaccattgccctggagaggccggacattgacccaggcagcaccgagagggccttcctc
agcgtctccaactacatcttcacagccatcttcgtggtagagatgatggtgaaggtggta
gccctgggactgctgtggggtgagcacgcctacctgcagagcagctggaatgtcttggat
gggcttcttgtcctggtgtccctggttgacattatcgtggccatggcctcagccggcggt
gccaagatcctaggtgttctgcgtgtgctgcgcctacttcggaccctgcggcctctgagg
gtcatcagccgagctccgggcctcaagctggttgtagagactctgatctcatcgctcagg
cccattgggaacatcgtcctcatctgctgcgccttcttcattatctttggcatcctcggg
gtgcagctttttaagggcaaattctactactgcgagggctcagataccaggaacatcacc
accaaggccgagtgccacgccgcccactaccgctgggtgaggcgcaagtacaactttgac
aacctgggtcaggcgctgatgtccctgtttgtgctgtcgtccaaggatggctgggtgaac
atcatgtatgatgggcttgacgctgtgggcattgaccagcagcccgtacagaaccacaac
ccctggatgctgctgtacttcatctccttcctgctcatcgtcagcttcttcgtgctcaac
atgttcgtgggcgtggtggtggagaacttccacaagtgccggcagcatcaggaggccgag
gaggcgcggcggcgtgaggagaaacggctgcggcgcctggagaggaggcgcaggagtaag
gcggcccccgaggtggcggaggcccagcgccggccatactacgcggactactcacatacg
cgccgctccatccactcgctgtgcaccagccactacctggacctcttcatcaccttcatc
atctgcctcaacgtcattaccatgtccatggagcactacaaccagcccaagtctctggat
gaggccctcaagtactgcaactacgtctttaccattgtcttcgtctttgaggctgcactg
aagctggtggcctttgggttccggaggttcttcaaggacaggtggaaccagctggacttg
gccatagtcctcctgtccatcatgggcattgcgctggaggaaattgagatgaatgctgcc
ctgcccatcaaccccaccatcatccgcatcatgcgcgtgcttcgcatcgcccgtgtgctg
aagctactgaagatggccacaggcatgcgtgccctgctggatactgtggttcaagctctg
cctcaggtagggaaccttggtcttcttttcatgctcctgttttttatctatgctgccctg
ggagtggagctgtttgggaggctagagtgcagcgaggacaatccctgtgagggcctgagc
aggcacgctaccttcaccaacttcggcatggccttcctcacactgttccgcgtgtccact
ggggacaactggaatgggatcatgaaggacactctgcgcgagtgcgcccgtgaggacaag
cactgcctcagctacctgcctgcgctctcgcctgtctacttcgtcaccttcgtgctggtt
gcccagttcgtgttggtcaatgtggtggtggctgtgctcatgaaacacctggaggagagc
aacaaagaggcccgcgaggatgctgagatggatgccgagattgagctggagatggctcag
gggtctgcagcccagcccccgtctgtagcacaggaaagcccggggacccagccagactct
ccaaacctcctggtggtgcgcaaagtgtctgtgtccaggatgctctccctgcccaatgac
agctacatgttccggcccgtggctcccgccatcgtcccacaccctcacccgctgcaggaa
gtggagatggagacctacgctggtagtgtccctttgggcccagtcacctctgctcactca
ccgcccctggagccccgtgcctccttccaggtcccatcaactgcgtcctccccagccagg
gccagcgatccccttcgtgccctttcaccccgaggtacaccccgctctctgagcctctca
cggatcctctgcagacaggaggccatgcacaccgagtccctggaaggtcaggttgatgat
gctggagaagagaacatcccagaccacacagagcctgccgaaaatacctccacgaggcag
gtgcctctgggctccctgcggtcccctccctgctccccacgacctgccagtgtccgtact
cgcaagcacactttcgggcagcgctgcatctccagccgccctcccaccttgggaggagat
gaggcggaagcagcggacccagcggacgaggaggtcagccacatcaccagctcagcccac
ccctggtcggccacagagccccacagcccggaggcctccccaacagcctcccctgctgcc
aaaggggcagtgggcagtgggcgggacccacgcaggttctgcagtgtagacgctcagagc
ttcctggacaaaccaggtagggcggatgtccagcggtggccctctgtggaactggatagt
ggagacagccacctggagtccggggaggggaggagccgggcctcagagctcgaaccagct
cttggtgcacgaaggaagaagaagatgagccctccttgcatctccatcgaaccccccgct
gaggatgagggctcctcccggccgcctgcagccgaaggtggcaacaccaccttgaggcgc
cgaaccccatcctgcgaggctgccctccacagggactgccccgagttcacagagggccca
ggcgctggaggggatgctgtagccaagggtgagcgctggggccaggcctcctgccgggca
gagcacctgaccgtccccaactttgccttcgagcctctggacaaggggggacctggtgga
gactctttcttggacagtgaccaaagcatgaccacagaacccagagtttctttgtcgggg
gctatagtgcctcttgttcaccatgaaactgaaccttctgtgccctctggcgaccctcca
gagaagggacaaggactgtacctcactgtgccccaggcccccttgaagaagccagggtcc
cccccagccacccctgccccagatgacagtggagatgagcctgtgtag
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integrated database retrieval system
