KEGG   Alexandromys fortis (reed vole): 126497562
Entry
126497562         CDS       T08493                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03022  Basal transcription factors
mfot05016  Huntington disease
mfot05017  Spinocerebellar ataxia
mfot05165  Human papillomavirus infection
mfot05166  Human T-cell leukemia virus 1 infection
mfot05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    126497562
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    126497562
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    126497562
   05165 Human papillomavirus infection
    126497562
  09164 Neurodegenerative disease
   05016 Huntington disease
    126497562
   05017 Spinocerebellar ataxia
    126497562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mfot03000]
    126497562
   03021 Transcription machinery [BR:mfot03021]
    126497562
Transcription factors [BR:mfot03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    126497562
Transcription machinery [BR:mfot03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     126497562
  RNA polymerase III system
    TFIIIB
     126497562
  RNA polymerase I system
    SL1/TIF-1B
     126497562
SSDB
Motif
Pfam: TBP TFIIA
Other DBs
NCBI-GeneID: 126497562
NCBI-ProteinID: XP_049991610
LinkDB
Position
Unknown
AA seq 315 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQAVATAAASVQQSASQQPTQGASGQTPQIFHSQTLTTAPLPGTTPLYPSPMT
PMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRI
REPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDV
KFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEA
FENIYPILKGFRKTT
NT seq 948 nt   +upstreamnt  +downstreamnt
atggaccagaacaacagcctccctccttatgctcagggcttggcctccccacagggagcc
atgactcctggaatccctatctttagtccaatgatgccttatggcacaggacttactccg
cagcctattcagaacaccaatagtctgtctattttggaagagcaacaaagacagcagcag
caacagcagcaacagcagcagcagcaggcagtagcaactgcagcagcctcagttcagcaa
tcagcatctcagcagcccacacagggtgcctcaggccagactccacagatcttccattcc
cagactctgaccactgcacccttgccaggcaccacccccttgtatccttcaccaatgacc
cctatgaccccgatcactcctgccacaccagcctctgagagctctgggattgtaccacag
ttgcaaaatattgtatccacggtgaatcttggatgtaaacttgacctaaagaccattgca
cttcgtgcccgaaatgctgaatataatcccaagcggtttgctgctgtcatcatgagaata
agagagccacgaacaactgcgctgattttcagctctggaaaaatggtgtgcaccggagcc
aagagtgaagaacaatccagattagcagcgagaaaatatgctagagttgtgcagaagttg
ggattcccagctaagttcttagacttcaagatccaaaacatggtgggaagctgtgatgtg
aagttccccatcaggctggaaggcctcgtgctgacccaccagcagttcagtagctatgaa
ccagaattatttcctggattaatctatagaatgatcaaaccaagaattgttctccttatt
tttgtttctggaaaagttgtattaacaggtgctaaagttagagcagaaatttacgaagca
tttgaaaacatctaccccatcttaaagggattcaggaagaccacatag

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