Alexandromys fortis (reed vole): 126498430 Help Entry 126498430         CDS       T08493                                  Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism mfot  Alexandromys fortis (reed vole) Brite KEGG Orthology (KO) [BR:mfot00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:mfot03009]     126498430    03012 Translation factors [BR:mfot03012]     126498430 Enzymes [BR:mfot01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      126498430     5.6.2.5  RNA 5'-3' helicase      126498430 Ribosome biogenesis [BR:mfot03009]  Eukaryotic type   Other ribosome biogenesis factors    126498430 Translation factors [BR:mfot03012]  Eukaryotic type   Initiation factors    Initiation associated factors     126498430 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 ResIII zf-AN1 Viral_helicase1 DEAD nSTAND3 AAA_16 UvrD-helicase Helicase_RecD SLFN-g3_helicase AAA_22 AAA_25 IstB_IS21 PhoH Zot Flavi_DEAD DnaB_C AAA UvrD_C_2 CbiA ABC_tran VWA_2 NTPase_1 DAP3 NPHP3_N ATPase Motif Other DBs NCBI-GeneID:  126498430 NCBI-ProteinID:  XP_049993050 LinkDB All DBs Position Unknown AA seq 991 aa AA seqDB search MASSTVESFVAQQLELLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLY GQRLVTFEPRKFGPVVVLPSNSFTSGDIVGLYDANESSQLATGVLTRITQKSVTVAFDES HDFQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDVLLGGSTPSPTAE IPPLTFYNTALDPSQQEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC APSNIAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRRDID QVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMVQSLTAADVVLATNTGASSDGPL KLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRS LMERLAEKHGSAVVRMLTVQYRMHQAITCWASEAMYHGQLTAHPSVAGHLLKDLPGVANT EETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHVQALVDAGVHASDIAVIAPY NLQVDLLRQSLSSKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAV TRARRHVAVICDSRTVNNHAFLKTLVNYFTEHGEVRTAFEYLDDIVPENYTHEGAQGHGR TPKPRDPATSIKKPASEQERGQEARATAGQGRRKPSERQPGSQVRSQPSSSAGGSDRSGG PDHIEHFRAVIEKFVASKESQLEFPASLSSHDRLRVHQIAEEFGLRHDSSGEGKARHITV SRKSPAGSGGVAPQPPSPPSPVLAESEPLAEQPLGQSHGPAQLDLKTLHLERLQRQQGGQ VQPVKAQPGVGSRPQKAPQKKKKKETKGPAPALPCEEDFDALVSAVVKADNTCSFTKCSA STTTLGQFCIHCSRRYCLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTRDRALDPA KRAQLQRRLDKKLGELSSQRTSKRKEKERGT NT seq 2976 nt NT seq  +upstreamnt  +downstreamnt atggcttcgtccaccgtggagagtttcgtggcccagcagctagagctgctggagctggaa agggacgccgaggtggaggagcgcaggtcctggcaggagcacagttctctgaaagagctc cagagccgaggggtgtgtttgctgaaactgcaggtatccagccagtgcactgggctgtac ggacagcgactggtcacctttgagcccaggaaattcgggcctgtggtggtgcttcccagc aacagcttcacttctggtgatattgtgggtctatatgatgctaatgaaagcagccaactg gccactggggttctgacccgcatcacccaaaagtcagtcacagtggcctttgatgagtcc catgatttccagttgaacctggaccgagagaatacctacagactactgaagctcgccaac gatgtcacttacaagcgactgaaaaaagcgctgatgacactgaagaagtaccactctggg ccagcatcctcactcatagacgtccttttgggtggctccaccccaagtcctaccgctgaa atacccccactcactttctacaacacggccctggatccttcccagcaggaagctgtgtct tttgcactggcccagaaagaacttgccatcatccacgggcctcctggcactgggaagact acaactgtggtggaaataatcctccaagctgtgaagcaaggcttaaaggttctgtgctgt gctccctccaacattgctgtggacaatctggtggagcggctggccttgtgtaagaagcgg attctgcgcctggggcaccccgcccgcctcctggagtccgcccagcagcactcactggac gcagtgctagcacgcagtgataatgcccagattgttgccgacatcagaagggacatcgac caggtctttggcaagaacaaaaagacccaggataagagagagaaaagtaattttcggaat gaaattaaactgctaaggaaggaactgaaggagagagaagaagcagccatggtccagagc ctcactgcggcagacgtggtcctagccaccaacacaggggcatcgtctgatggccctcta aagttgctgcctgagaaccactttgatgtggtggtggtggacgagtgtgcccaggccctg gaagccagctgttggatccccctgctgaaggccccaaagtgcatcctagctggagaccat aaacagctgccacctaccaccgtctctcacaaggcagcactggctgggttgtcccgcagc ctgatggagcgcctggcagagaagcatggttctgctgtggtaaggatgctgactgtacag taccgaatgcaccaggccatcacatgctgggcctcggaggccatgtaccacggacagctt actgcccatccctctgtggcaggacacctcctgaaggacctcccaggtgtggctaacaca gaggagacaagtgtccccctgctgctcatagacacggccggctgtgggctgttggagctg gacgaggaggacagccagtccaagggaaacccaggcgaagttcgcctcgtcactttgcac gtccaagcgctggtggatgctggggtccatgcaagtgacattgctgtcatcgcaccctac aaccttcaggtggatctgctcaggcagagcctctccagcaagcaccctgagctcgagatt aagtctgttgatggcttccaaggccgagagaaggaggctgtgatcctgaccttcgtcagg tccaacaggaaaggtgaagtcggttttctggctgaggataggcggatcaatgtcgctgtc acccgtgcccggcgccacgtggcagtcatctgtgactcccgcactgtcaacaaccacgcc tttttgaagaccctggtgaattatttcacagagcacggggaggtacgcacagcctttgag tacctggacgacatcgtccctgagaactacacccatgagggtgcccagggccatggccgc acccccaagcccagggaccctgccacctctatcaagaagcctgccagtgagcaggagagg ggccaagaggccagagcaaccgccggacagggccgcaggaagccaagtgagaggcagcca ggctctcaagtccgctcccagcccagctccagtgcaggaggctctgacagatctggaggc ccagaccacatagagcactttagggctgtgatcgagaagtttgtggccagcaaggagtcc cagttggagttccctgcatccctgagctcccatgacaggctgcgagttcaccagatagct gaggaatttgggctgaggcacgacagctccggggaggggaaggcacggcacatcacagtg agtaggaagagccctgcaggttctggtggtgtagccccacagcctccctcaccccccagc cccgtgctggctgagtctgagccactggcagaacagccccttgggcagtcacatggcccc gcacagctggatctgaagaccctgcatctggagaggctgcagagacagcagggcggccaa gtgcagccagtcaaggctcagccaggagtaggttcgagaccacagaaggctccacagaag aaaaagaaaaaagaaacaaaaggtccagccccggctctgccctgcgaggaggacttcgat gccctggtgtcagctgtggttaaggctgacaacacctgtagcttcaccaagtgttcggcc agcaccaccacactgggccagttctgcatacactgtagccgccgctactgcctcagccac cacctgcccgagatccatggctgcggtgaaaaggctcgtgcccatgcccggcagaggatc agtcgggaaggagtactctatgcaggcagtgggaccagggacagggctctggatccagcc aagagggcccagctgcaaaggaggctggacaagaaactgggcgagctcagtagccagagg acaagcaagaggaaggagaaggagaggggaacatga

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