KEGG   Alexandromys fortis (reed vole): 126498439
Entry
126498439         CDS       T08493                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126498439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mfot03041]
    126498439
   04121 Ubiquitin system [BR:mfot04121]
    126498439
Spliceosome [BR:mfot03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    126498439
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    126498439
Ubiquitin system [BR:mfot04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126498439
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 126498439
NCBI-ProteinID: XP_049993062
LinkDB
Position
Unknown
AA seq 806 aa
MGSSKKHRGEKEAAGTTAAAGTGSATEQPPRHREHKKHKHRSSGGGSSGGERRKRSRERG
GERGSGRRGAEAEARGGAHGRERSQAEPSERRVKREKRDDGYEAAASSKTSSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
FEQRRQDLYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQEGEDVLVNVNMVDKERA
DKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGL
RERELEEIRAKLRLQAQSLSSVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVVMRA
DDLLPLGDQTQDGDFGSRLRGRGRRRVPEVEEEALEDEEKDPVARPPPSDDTRVENMDIS
DEEDGGALPSGSPEVLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVVEIVKKLES
RQRGWEEEEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANG
GSESDGEENIGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETT
VQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVD
ETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQE
KQKAQKTPYIVLSGSGKSMNANTITK
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggggtcgtcaaagaagcaccgcggagagaaggaggcggccggcacgacggcggcggcc
ggtaccgggagcgccaccgagcagccgccacggcatcgagagcataagaaacacaagcac
cggagcagcggcggcggcagcagcggcggcgaacgacggaagcggagccgcgagcgtggg
ggcgagcgcgggagcgggaggcgcggggccgaagccgaggcccgcggcggcgcccacggt
cgcgaacgaagtcaagcggagccctcggagcggcgcgtgaagcgggagaaacgcgatgac
ggctacgaggccgctgccagctccaaaactagctctggagatgcctcatcacttagcatc
gaggagaccaataaactccgtgcaaagttggggctgaaacccttggaggtcaatgctgtc
aagaaagaggcgggcaccaaggaggagcccgtggcagctgatgtcatcaaccccatggcc
ttgcgacagcgtgaagaactacgggagaagctggcagctgccaaggaaaagcggttgctg
aaccaaaaattggggaaaataaagactctcggggaggatgacccctggctggatgacact
gcagcctggatcgagaggagccggcagctgcagaaggagaaggacctggcagagaagcgg
gccaagctactggaggagatggaccaagagtttggtgtgagcactctagtggaggaggag
tttgagcagaggcgacaggacttgtatagtgcccgggatttgcagggcctcactgtggaa
catgctatcgattcctttcgagaaggagagactgtggtcctcaccttaaaggacaaagga
gtcctgcaggagggagaggacgtgctggtgaacgtgaacatggtggacaaggagcgggca
gacaagaatgtggagctgcggaagaagaagcccgactacctgccctatgcagaagatgag
agtgtggatgatttggcacagcaaaagccccgctctatcctggccaaatatgatgaggag
ctggagggcgagcggccacattccttccgtttggagcagggtggcatggctgatggactg
agggagcgcgagctggaagagatccgggctaagttacggctgcaggctcagtctctgagt
tctgtagggccccggcttgcctctgagtatctcagtcctgaagagatggtgaccttcaaa
aagaccaagcggagggtgaagaaaatccgaaagaaggagaaggaagttgtaatgcgggcg
gatgacttactgcctctcggggaccagactcaggatggggactttggatccaggcttcgg
ggccggggtcggcgtcgggttcctgaggtggaggaggaggccctggaggatgaagagaag
gaccctgtggcccggcccccaccatcagatgatactagagtagagaacatggatatcagt
gatgaagaggatgggggagctcttccgtcagggtccccagaggtgctggaagaagatgaa
gcagagctggagctgcagaagcagctggaaaaggggcggcgtctgcggcaactgcagcaa
ctccagcagcttcgagacagcggcgagaaggtggtggagattgtgaagaagttggagtct
cgccagcgcggctgggaggaggaagaggaccctgagcggaagggggccatcgtgttcaat
gccacttctgaattctgccgcacgctaggggagatccccacctatgggttggctggcaac
cgggaagagcaggaggagctcatggacttcgaaagggatgaagagcgctcggccaatggt
ggctctgaatcagatggggaagagaacatcggctggagcaccgtcaacctcgatgaggag
aagcagcaacaggatttctctgcctcttctaccaccatcctggatgaggaacccatcgtg
aacagagggctggctgctgccctgctcttgtgtcagaacaaagggcttctggagaccaca
gtgcaaaaggtggcccgggtgaaggctcccaataagtcactgccctcagccgtgtactgc
atcgaggataagatggccatcgatgataagtacagccggcgggaggaatacaggggcttc
acccaggacttcaaggagaaggacggctacaagcctgatgttaagattgagtacgtggac
gagacgggcaggaaactgactcccaaggaggccttccggcaactgtcccaccgcttccac
gggaagggttcaggcaagatgaagactgagcggcggatgaagaagctggatgaggaggcg
ctcctgaaaaagatgagctccagtgatacgcccctgggcactgtggcactgctccaggag
aagcagaaggcccagaagacaccatacatcgtgctcagtggcagtggcaagagcatgaat
gcgaacaccatcaccaaatga

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