Alexandromys fortis (reed vole): 126498450
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Entry
126498450 CDS
T08493
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04612
Antigen processing and presentation
mfot05145
Toxoplasmosis
mfot05152
Tuberculosis
mfot05164
Influenza A
mfot05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
126498450
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
126498450
09171 Infectious disease: bacterial
05152 Tuberculosis
126498450
09174 Infectious disease: parasitic
05145 Toxoplasmosis
126498450
09163 Immune disease
05340 Primary immunodeficiency
126498450
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mfot01001
]
126498450
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mfot04054
]
126498450
Enzymes [BR:
mfot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
126498450
Protein kinases [BR:
mfot01001
]
Serine/threonine kinases: Other
TAF1 family
126498450
Pattern recognition receptors [BR:
mfot04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
126498450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
126498450
NCBI-ProteinID:
XP_049993086
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MNHFQAILAQVRMLLSSQQPRQVQALLDSLLEEELLSREYHCALLREPDGEALARKISLT
LLEKGDLGLACSSWVCSRLQDPVLERATSYRDHGGHSLCATMELGLPEGSYLELLNSDAD
PLHLYHLYDQMDLAGEEIELSSEPDTDTINCDQFSKLLQDMEGDEETREAYANIAELDQY
VFQDTQLEGLSKDLFIEHIGAEEGFSESMEVSGEEAQRPQKRRSTEEHATDSKHRKLAEP
SSVPILTGSFLMGPASLSAMPCLSPALSSQEPVSSHLYLEGAVQTSGPPSRSSLNCLDLP
IGHIQLLPTLPQGLLQISGAGTGLSSVLIYHGEMPQVNQAVPSGSPTVPSLPKSPGRPGS
TSPFAPSAADLPSMPEPALTSRVNETEDTTSPSPCQEGPESSIKLPKWPESVERFQHSLQ
DKYQVEPESLSSPMVAIELVRARLERGSNKSQERELATPDWTERQLAHSGLAEVLVGNGR
WPRETQVVAVLGKAGQGKSHWARMVSQTWARGQLPQYDFVFYVPCHYLDRPGDSYYLRDL
LCPPSLQPLVMDDEVLGHIVRQPDRVLLILDAFEELEAQDGLLHGPCGPLPPEPCSFRGL
LAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADAIFEVPSFSTKQAQTYMRHYFENSGTA
GDQDKALGLLERQPFLLTHSHSPALCRAVCQLSKALLEQGTEAQLPGTLTGLYVSLLGPA
VRDSPPGALTELAKLAWELGRRHQSTLQETQLLSVEMRTWAVTQGLVQPTLGTTEDQLAF
SSFLLQCFLGAVWLAQCDEIRDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPQTH
CLGALVEPAVTEKKRKVLTRYLKRLQLGTLRASRLLELLHCAHETQEPGIWEHVTHQLPE
HLSFLGTRLTPPDVHMLSRALETASQDFSLDLRQTGIEPSGLGNLVGLSCVTSFRASLSD
TMVLWESLRQQGESQLLQAAEEKFTIEPFKAKSPKDVEDLDSLVQTQRLRNPSEDAAPDL
PAIRDLKKLEFALGPVLGPQAFPTLAKILPVFSSLQHLDLDSLSENKIGDDGVSKLSATF
PQLKVLETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCIRDAGAKSLAQVLPDM
VSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDSRISLR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggccattctggctcaggtgcggatgctgctctccagccagcagccc
aggcaggttcaggccctcctggacagcctgctggaagaagagctgctctcccgggaatac
cactgtgccctgctccgggagcctgacggcgaagctctggcccggaagatttccctgacc
ctgctggagaaaggggacttaggcttggcttgctcgagctgggtctgtagcaggctgcag
gacccagtgttagaaagggccaccagctacagggaccatggaggtcatagtctgtgtgcc
accatggaattggggcttccagagggcagctacctggagctccttaacagcgatgctgac
cccctccacctctaccacttgtatgaccagatggacctggctggggaggagatagagctc
agctcagagccggacacagacaccatcaactgtgaccaattcagcaagctgctgcaggac
atggaaggggatgaagagaccagggaggcctatgccaacatcgcggaactggatcagtac
gtgtttcaggacacccagctggagggcctcagcaaggaccttttcatagagcacattgga
gcagaggaaggcttcagtgagagcatggaagtttctggagaagaagcacagaggccccag
aagagacgctccacagaagagcatgctacagactccaagcacaggaagctagccgagccc
tcttccgtgcccatattgactggcagcttcctgatggggccagcaagcctctccgccatg
ccttgtttatcacctgctctatctagtcaagagccagtgtccagccatttatacctggag
ggagctgttcagacatctgggcccccctctaggtcctcattgaactgtctggatctcccc
attggacacatccagcttcttcccactctgccccagggacttttgcaaatctcaggggct
ggcacaggtctctccagtgttctgatctaccatggtgagatgccccaagtcaaccaagca
gtcccttcaggcagccccactgtccccagcctccccaaatccccagggcggccgggctcc
accagcccctttgcaccatctgcagctgacctgcccagtatgcctgaacctgcgctcacc
tcccgtgttaatgagacagaggacacaacatccccctccccatgccaggaaggtcccgag
tcttccatcaagcttccaaaatggccagagtctgtggaacggttccagcactccctgcag
gacaagtaccaggtggagcccgagagcctgagcagtcccatggtagccatagagctggta
cgggccaggttggagagaggcagcaacaagagccaggaaagggagctagccactccagac
tggacagagcgccagctagcccatagtggcctagctgaggtgcttgtcggcaacggccgg
tggccacgagagacacaggtggtcgctgtgctgggcaaggctggccaaggcaagagccac
tgggcccggatggtgagtcagacctgggcccgtggccagttgccacaatatgactttgtc
ttctatgtcccatgtcactacttggatcgtccaggcgactcttactacctgcgtgatctg
ctctgtcccccaagcctgcagccactggtcatggatgatgaggtcttaggtcacattgtg
aggcaaccggaccgtgtcctgctcattctagatgcttttgaggagctagaggcccaagat
ggtctcctgcacggaccatgtggacctctgcccccagagccctgctccttccggggactg
ctagctggactgttccagaggaagctgctgcgcggctgtaccctgctcctcactgcccgg
ccccggggccgcctggctcagagcctgagcaaggcagacgccatcttcgaggtgcccagc
ttttctactaaacaggcccagacttatatgaggcactactttgagaactcagggacagca
ggggaccaagacaaggccctgggcctcctggagcgccagccttttctcctcacccacagt
cacagtcctgctctgtgcagggctgtgtgccagctctccaaggccctgctggaacagggc
acagaggcccagctgcctggtacacttacaggactctatgtcagcctgctaggccctgca
gtccgagacagtcctccgggggccttaactgagctggccaagctggcctgggagctgggc
cgcagacaccaaagcaccttgcaagagacccagttactatccgtggagatgaggacctgg
gcagtgacccaaggcttggtgcagcccaccctggggaccacagaggaccagctggccttc
tctagttttctgctacagtgcttcctgggtgctgtgtggctggcacagtgtgatgaaatc
agagacaaggagctgccacagtacctggccttgaccccaaggaagaagagaccctatgac
aactggctggagggtgtaccacggtttctggctggattggttttccagcctcaaacccac
tgcctgggagcgctggtggagcctgcagtgacagaaaagaaacggaaagttcttaccagg
tacctgaagcgcctacagctggggacgctgcgggccagccggctgctggagctgctacat
tgtgcccatgagacacaggaacctgggatttgggagcatgtaacacaccagctccctgag
catctctccttcctgggcacccggctcacacccccagatgtgcacatgctgagcagggcc
ctagagacggccagccaggacttctccctggaccttcgtcagactggcattgagccctct
ggactggggaacctcgtgggactgagctgtgtcaccagtttcagggcctccttgagcgac
acaatggtgctatgggagtccctacggcagcagggagagtcccagctactccaggcagca
gaggagaaattcaccattgagccattcaaggccaagtctcccaaggatgtggaagacctg
gacagcttggtgcagacccagaggctgagaaatccctcggaggatgcagctccagatctt
cctgccatccgggaccttaagaagctagagtttgcgttgggcccggtattgggcccccaa
gctttccccacactggcaaagatccttcctgtgttctcatccctgcagcacctggacctg
gactcactcagtgagaacaagattggggacgacggtgtgtcgaagctctcagccaccttt
cctcagctcaaggtcctggagacactcaacctgtcccagaacagcatcacggatgtgggt
gcctgcaagcttgcggaagccctgcctgccctagccaagtccctcctaaggctgagcttg
tacaataactgcatccgtgacgcaggagccaagagcctggcacaagtgcttccggacatg
gtgtccctgcgagtgatggatgtccagttcaacaagttcacggctgccggtgcccagcag
ctggcctccagccttcagaagtgccctcaagtggaaacgctggcaatgtggacacctact
atcccctttggggttcaggaacacttgcagcagctggattcccggatcagcctaagatga
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