Alexandromys fortis (reed vole): 126498673
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Entry
126498673 CDS
T08493
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126498673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126498673
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126498673
mRNA degradation factors
5'-3' decay
Decapping complex
126498673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
126498673
NCBI-ProteinID:
XP_049993506
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAADEQAGSRERDEMDLLGDHEENLAERLSKMVIENELEDPAIMTAVQTRPVLQPQPRS
LNSSIWDGSEVLRRIRGPFLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAIPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPTTPPPQQHPPGPGPHLQNLRPQAPMFRPDTTHLHPQ
HRRLLHQRQQQSRNQHRNLNGAGDRGSHRTSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALVDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSATAPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPAIESTQNNQWTEVMFM
ATRELLQIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctagatgaagatgaagatgcatttcaa
ggcctgggagaagaagatgaagaaatcgatcaattcaatgatgatacgtttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgagctggaagagaagcta
cctgcggcagctgatgaacaagcaggcagtagagagagggatgagatggacctgttgggt
gaccatgaggagaatctcgcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagctatcatgacagcagtgcagaccaggccggttttacaacctcaacccagaagt
ctgaattccagcatctgggatggatctgaagttctgaggcgaatccgtggaccatttctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagcggcccccacag
ggcccagaagatgatcgggacctttctgagcgagctttaccaaggcggtcaacatcgcct
gtcattggaagtcctcctgttcgagctgttcctataggcaccccacctaagcagatggcc
attcccagcttcaaccaacagattctgtgtccgaagcctgttcatgtacggcccccaatg
ccaccacgttatcctgctccctatggtgagaggatgtcaccaaaccagctctgcagtgtc
ccgaactcctcccttctgggccacccttttccgcctagtgttcctcctgtacttagtccc
ctgcagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagccccctggctgccatgaatcctaagtta
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccccccactacaccacccccccagcagcatcctcctggcccaggacctcacctg
caaaacctaagacctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccggcgcctgttgcatcagaggcagcagcagagcagaaatcagcatcggaatctcaat
ggtgcgggagacagaggaagtcaccggaccagtcatcaagatcatctccggaaggatccc
tatgctaatctcatgttgcagcgggagaaggattgggtctctaaaatccagatgatgcag
ctgcagagcactgatccctacctggatgatttctattaccagaattactttgaaaaactg
gagaaattgtcagctgctgaagaaatacaaggtgatggtcctaagaaggagcgtaccaag
ctcatcaccccccaggtggccaaactggagcatgcttataagcctgtgcagttcgagggc
tctttgggtaagcttactgtctctagtgtgaataatcctcggaagatgatcgatgctgtt
gtgacgtctcggagtgaggatgatgaaacaaaagaaaaacaagttcgggacaagagaagg
aaaacccttgtcataattgagaaaacctatagtttactccttgatgtggaagattatgaa
aggcgctatctcctaagtctagaagaagagcggcctgccctggtggatgaaagaaagcac
aaaatctgtagcatgtatgacaacctgaggggcaaattgcctggacaagagaggccaagc
gatgaccacttcgtacagatcatgtgtatccgaaaaggaaagagaatggttgcccgcatt
ctccctttcctctccacagagcaagcagctgacattctcatggcaactgccaggaacctc
cctttccttatcaagaaggacgcacaagatgaggtgctgccatgcttactgagtcccttc
tctcttctcctctatcatcttccttcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcaaagtgcaactgcaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcttgtcactgctcctaatcctcctaagccgcggggaagacctacag
agttcggaccctgctatagagtcaacgcaaaataaccagtggacagaggtgatgttcatg
gcaaccagagaacttctacagataccccaagcggccttggccaagccaatttctataccc
acaaatctagtgtcccttttttctcgctatgttgaccggcagaaactgaacttgctggaa
acaaaactacagctggttcaggggatacgataa
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