Alexandromys fortis (reed vole): 126498722
Help
Entry
126498722 CDS
T08493
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
126498722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126498722
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126498722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
AbiJ_NTD5
HTH_15
Motif
Other DBs
NCBI-GeneID:
126498722
NCBI-ProteinID:
XP_049993575
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MQTAQSSCPGSPPDTGDGWEPVLCRGEINFGGSGKKRGKFVKVPSSVAPSMLFELLLTEW
HLPAPNLVVSLVGEERPFAMKSWLRDILRKGLVKAAQSTGAWILTSALRVGLARHVGQAV
RDHSLASTSTKVRVVAIGMASLDPWRAQQGPAKAAPKVSTSPCLPKRLAQEDTPIHYPED
EGSIQGPLCPLDSNLSHFILVEPGGLGSGNGLAELRLSLEKHISQQRTGYGGTSSIQIPV
LCLLVNGDPRTLERISRAVEQAAPWLILAGSGGIADVLAALVSQPHLLVPQVTEKQFREK
FPGECFSWEAIVHWTELLQNIAAHPHLLTVYDFEQEGSEDLDTVILKALVKACKSHSQEA
QDYLDELKLAVAWDRVDIAKSEIFNGDVEWKSCDLEEVMTDALVSNKPDFVRLFVDSGAD
MAEFLTYGRLQQLYHSVSPKSLLFELLQRKHEEGRLTLAGLGAQQARELPIGLPAFSLHE
VSRVLKDFLHDACRGFYQDGRRAEERGPPKRPTGQKWLPDLNRKSEDPWRDLFLWAVLQN
RYEMATYFWAMGQEGVAAALAACKIIKEMSHLEKEAEVARTMREAKYEQLALDLFSECYS
NSEDRAFALLVRRNHSWSRTTCLHLATEADAKAFFAHDGVQAFLTKIWWGDMATGTPILR
LLGAFTCPALIYTNLITFSEDVPQRIGPEELQEPDSLDMEKSFLCSQGGQLEKLTETPRA
PGELGPQAAFLLTRWRKFWGAPVTVFLGNVVMYFAFLFLFTYVLLVDFRPPPQGPSGSEV
TLYFWVFTLVLEEIRQGFFTDEDTRLVKKFTLYVEDNWNKCDMVAIFLFIVGVTCRMLPS
VFEAGRTVLAIDFMVFTLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLVAYGV
TTQALLHPHDSRLEWIFRRVLYRPYLQIFGQIPLDEIDEARVNCSLHPLLLESSASCPNL
YANWVVILLLVTFLLVTNVLLMNLLIAMFSYTFQVVQGNADMFWKFQRYHLIVEYHGRPA
LAPPFILLSHLSLVLKRVFRKEAQHKRQHLERDLPAPLDQKIITWETVQKENFLSTMEKR
RRDSEGEVLRKTAHRVDLIAKYVGGLREQEKRIKCLESQANYCTLLLSSMADTVAPGSTY
LSSQNCGRRSQPVSARDREYPEAGLPPSDT
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgcccagagctcctgccctggaagccccccagatactggcgatggatgggag
ccagtgctatgccggggagagatcaacttcggagggtccgggaagaagcgaggcaagttt
gtgaaggtgccaagcagcgtggccccctctatgctctttgagctcctgctcaccgagtgg
cacctgccagcccccaacctagtggtgtctctggtgggcgaggagcggccttttgctatg
aagtcctggcttcgggacatcctgcgcaaggggctggtgaaagcagctcagagcacaggt
gcttggatcctgaccagcgccctccgtgtaggcctagcccgtcatgttgggcaggctgta
cgtgatcactctctggctagcacatccaccaaagttcgcgtagtggccatcggaatggcc
tctctggacccatggcgtgcacagcaaggcccagccaaagctgctcctaaggtctccacc
tctccatgtcttcccaaacgcttggcacaggaagatactcccatccactaccctgaagat
gagggcagcatccagggacctctctgccccctggacagcaatctctcccacttcatcctg
gtggagcctggtggcctcgggagtgggaacggactggcagagctacggctgagcctggag
aagcacatctctcagcagaggacaggttatgggggcaccagcagcatccagatacctgtc
ctttgcctactggtcaacggtgaccccagaaccctggagaggatttccagggcagtggag
caggctgccccgtggctgatcctggcgggttctgggggcatcgctgatgtacttgccgct
ctggtgagccagcctcatctcctggtgcctcaggtcactgaaaagcagttcagagagaaa
ttccccggcgagtgtttctcttgggaagccattgtgcactggacggagctgctacagaac
atcgctgcacacccccaccttctcactgtgtatgacttcgagcaggagggttctgaggac
ctggacactgtcatcctcaaggcacttgtgaaagcctgcaagagccacagccaggaggcc
caagactacctagacgagctcaagttggctgtggcctgggaccgcgtggacattgccaag
agcgagatcttcaatggcgacgtggaatggaagtcctgcgacctggaagaggtgatgacg
gatgccctagtgagcaacaagcctgacttcgtgcgcctctttgtggacagcggtgctgac
atggccgagttcttaacctatgggcggctgcagcaactttaccactcggtatcccccaag
agcctcctctttgaactgctacagcgtaagcatgaggagggccgactgacgctggctggc
ttgggtgctcagcaggcccgggagctgcccattggactacctgctttctcactccacgag
gtctcccgtgtactcaaggatttcctgcacgatgcctgccgtggtttctaccaagacggg
cgcagggcggaggagagagggccgcccaagcgaccgacaggccagaagtggctgccagac
ctcaatcggaagagtgaggacccttggagggacctgttcctctgggctgtgctgcagaac
cgttatgagatggccacatacttctgggccatgggccaggagggtgtggctgctgctctg
gctgcctgcaagatcataaaggaaatgtcccacctggagaaggaagcagaggtggcccgc
accatgcgtgaggccaagtatgagcagctggccctggatcttttctcagagtgctacagc
aacagcgaggaccgcgccttcgccctgctggtacgcaggaaccacagctggagccggacc
acttgcttgcacctggccactgaagccgatgccaaggccttctttgcccatgatggtgtg
caagcattcctgaccaagatctggtggggagacatggccacaggcacgcccatcctacgg
ctgctgggtgccttcacctgcccagccctcatctataccaacctcatcaccttcagtgag
gatgtaccacagaggataggcccggaagagctgcaggagccagacagcttggatatggaa
aagagcttcctgtgcagccagggtggccaattggagaagctgacagagacaccaagggct
ccaggtgaactgggcccacaagctgccttcctgctcacacggtggcggaagttctgggga
gcacctgtgactgtgttcctggggaacgtggtcatgtactttgcattcctcttcctcttc
acctatgtcctgctggtggactttcggccacctccccaggggccatctgggtctgaggtc
accctctatttctgggtgttcacactggtgctggaggaaatccgacagggcttctttaca
gacgaggacacacgcctggtgaagaagtttactctgtatgtggaggacaactggaacaag
tgtgatatggtggccatcttcctgttcattgtcggtgtcacctgtaggatgctgccctcg
gtgttcgaggctggccgcactgttctggccatcgacttcatggtgttcacacttcggctc
atccacatctttgccattcacaagcagctgggtcccaagatcatcattgtagagcggatg
atgaaggatgtcttcttcttcctctttttcctgagcgtgtggcttgtggcctatggtgtg
accactcaggccctactgcacccccacgacagccgtctggagtggattttccgccgagtg
ctctaccggccttatctgcagatctttgggcaaatccctctggacgagattgatgaggcc
cgtgtgaactgttcgcttcatcctctactgctggaaagctcggcttcctgccccaatctc
tatgccaactgggtggtcattctccttctggtcaccttcctgctggtcactaatgtgcta
cttatgaacctgctgatcgccatgttcagctacacattccaagtggtccagggcaatgcc
gacatgttctggaagtttcaacgctatcacctcattgttgaataccacgggcgaccagct
ctggccccgcccttcatcctgctcagccacctgagtctggtgctcaagagggtcttcagg
aaagaagcccagcacaagcgtcaacatctagagagagatttgcctgcccccttggaccag
aagatcattacctgggaaacagttcagaaggagaacttcctgagcaccatggagaaacgg
aggagggacagcgagggagaggtgctgaggaaaacggcacacagagtggacttgattgcc
aaatacgtcggggggctgagagagcaagaaaagaggatcaagtgtctggaatcacaggcc
aactactgtacgcttctcctgtcctccatggctgacacagtggctccaggcagcacctac
ttaagctctcagaactgtggtcgcaggagtcagccagtctctgccagagacagggagtac
ccagaggctggcttgccaccctcagacacctga
DBGET
integrated database retrieval system
