Alexandromys fortis (reed vole): 126498938
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Entry
126498938 CDS
T08493
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126498938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126498938
03036 Chromosome and associated proteins [BR:
mfot03036
]
126498938
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126498938
Coactivators
SAGA/TFTC/STAGA complex
126498938
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126498938
STAGA complex
126498938
TFTC complex
126498938
SAGA complex
126498938
SLIK complex
126498938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
126498938
NCBI-ProteinID:
XP_049993898
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MLGLQSSTGTMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQN
SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPTREGELYFPEDREVNLV
ELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLG
DDPQLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLC
LGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQIL
LSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQ
VKADGHKVYGAILVAVERLLKMKAQAAEPNRSGLGGRGCHRAEDLPWDSLLLESSPGGGA
EPGFGSGLPLPPGGARLEDPSSLTLAEIYRELYAFFGDSLATRFGTGQPAPTVPRPPGDK
KEPVAAPDSVRKMPQLTANAVVSPQGDESPLGGGPATASAASESRPLPRVHRARGAPRQQ
GPGTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQK
LPMIGRTGRPARRWALSDYSLYLPL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggctgcaaagctccactggaaccatgtcggagagagaagagcggaggtttgtg
gagatccctcgggagtcagttcgactcatggcagagagcacagggctggagctgagtgac
gaggtggcagctctgcttgctgaagatgtgtgctaccgtctcagagaggccacacagaat
agctctcagttcatgaagcacaccaaacgaaggaagctgacggtagaggatttcaacagg
gctctcaggtggagcagtgtggaggctgtgtgtggctatgggtcccaggaggcattgccc
ttgcgccccacaagagagggtgagctctactttccagaggaccgagaagtgaacctcgtg
gagctggcattggccaccaacatccccaagggctgtgcagagacagcagtcagagtccat
gtctcctatctggatggcaaaggaaacctggcacctcagggatcagtacccagcgcagtg
tcttcactgacagatgaccttctcaagtactaccagcaagtcacgcgggctgtactgggg
gacgatccacagctgatgaagatcgccctccaggacctgcagacaaactccaagattgct
gcactcctgccttactttgtttatgtggtcagtggggtcaaatctgtaagccatgacctg
gagcagctacaccgactactgcaggtggcacggagcttgatacggaacccacacctctgc
ttggggccctatgtccgctccctggtggggagtgtgctctattgcgtcttggagcccctg
gccgcctccatcaaccctttgaatgaccactggactcttcgggatggggctgcacttctt
ctcagccacatcttctggactcatggtgaccttgtaagtggcctctatcagcagattctg
ctatccctgcagaaggtcctgacagaccctgttcggcctctctgttctcactatggggct
gtggtagggctgcatgctctgggctggaaggctgtagaacgagtcctttacccacatcta
cccacttactggacaaacttgcaggccgtgctggatgactattcggtatctaatgcccag
gtcaaagcagatgggcacaaagtctatggagctattctggtggccgtagagcgactactg
aagatgaaagcccaggcagcagagcccaatcgcagtggccttggcgggagagggtgccat
cgtgctgaggacttgccttgggacagccttctcctagagtcttccccgggaggtggtgcc
gaaccaggctttgggtctggtcttcccctgccgccaggaggcgcccggctagaggacccc
tcttccttgaccctggcagaaatctaccgggagttgtacgctttctttggtgacagcttg
gccacacgcttcggcactggccagcccgcgcccacggtcccgcgcccacccggagacaag
aaggagccagtggccgccccagactcggtgcggaaaatgccgcagctgaccgctaacgcc
gtggtcagcccgcagggagacgagagcccgctcggcgggggccccgcgaccgcctccgcc
gcctcggagagcaggccgctgccgcgcgtgcaccgggcgcggggcgctcctcgtcagcag
ggtcctggcaccgggacgcgcgacgtcttccagaagagccgctttgcgccccgcggtgcc
ccccacttccgttttatcatcgctgggcgtcaggccgggcggcgctgccgcgggcgtctc
tttcagactgctttccccgcgccctacgggcccagcccggcgtcccgctacgtgcagaag
ttgcccatgatcggccgcaccggccgcccggcccgccgctgggcgctctcggactattcg
ctgtacctgcccctgtaa
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