Alexandromys fortis (reed vole): 126499540
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Entry
126499540 CDS
T08493
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126499540
03015 mRNA surveillance pathway
126499540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126499540
03041 Spliceosome [BR:
mfot03041
]
126499540
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126499540
Spliceosome [BR:
mfot03041
]
Complex C
Other components
EJC/TREX
126499540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
126499540
NCBI-ProteinID:
XP_049994748
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAQQEEGKVAQREEELEETGNQHNDVEMEEAGEDEEKEAGAVHSDAEKEQEEEEQKQ
EMEAKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEMMGSNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENINSVEVEKESEEKEDKEPEPQPEPMAQPQPPP
QPFPQSQPHSQPQPVLQSQPLSQPETLPLTVLQPPLQVLQEQGNLLPERKDFPIESIKLP
EVPLEPVLTVHSENKNKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSS
GSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS
GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgagaactttgcaggagcagctggaaaaggccaaagagagcctcaag
aacgtggacgagaatatccgcaagctcaccggccgggacccaaacgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggcagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggcagtcagtaggctgggtggggagcggcgaacaagaagagaatcacgccaggagagc
gacccagaagatgatgatgttaaaaagccagcgctgcagtcttccgttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggaccaaaacatggatgaaaaggggaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaatttaaacaagaatct
actgttgcgactgaaaggcaaaagagacgccaagaaattgaacaaaaacttgaagttcag
gctgaagaagagagaaaacaagtggaaaatgagaggcgggaactgtttgaggagagacgt
gccaaacagacagagctgaggcttctggagcagaaagttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaagtacataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcgcaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatggaggaggcaggagaggacgaggagaag
gaagcaggtgcagttcatagtgatgcagagaaagaacaggaggaggaggagcaaaagcag
gaaatggaggctaagatggaggaggagactgaggtaagagaaggtgagaagcagcaggat
agtcagccagaagaagttatggatgtgttagagatggttgaaagtgtcaaaaatgtaatt
gctgagcaggaaatgatgggaagtaatcaagtcgaaagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatattaattctgtggaagtggaaaaggagtctgaggaa
aaagaagataaagaacctgagccccaacctgagccaatggctcagcctcagcccccgcct
cagccctttccccagagccagccccattctcagccccaacccgtactccagtcccagcct
ctctctcagcctgagactttgccattaacagttttgcagcctccgcttcaggtgcttcag
gagcaagggaatctcctacctgagcggaaggattttcctatagagtctataaaactccct
gaggtgcctctagagccagtcttgacagtacattcagaaaacaaaaataaaaacaaaact
aggagcagaagcagaggtcgggcacgaaataagacaagcaagagcagaagccggagcagc
agcagcagcagctccagtagcagctccaccagtagcagcagtggtagcagttccagcagt
ggcagtagcagtagtcgaagcagctcgagcagcagttccagcaccagtgggagcagcagc
agagacagcagcagcagcactagcagtagcagtgagagtagaagtcgtagtaggggccga
ggacataaccgagataggaagcacaggaggagcgtggaccggaagcgaagggacacttca
ggactagagagaagtcacaagtcttccaaaggtggtagtagtagagatacgaaaggatca
aaggataagaattcccgatctgacagaaaaaggtctatctcagagagtagtcgatcgggc
aaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa
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