Alexandromys fortis (reed vole): 126499582
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Entry
126499582 CDS
T08493
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126499582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126499582
03041 Spliceosome [BR:
mfot03041
]
126499582
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126499582
Spliceosome [BR:
mfot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126499582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
126499582
NCBI-ProteinID:
XP_049994820
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRNPKVIRSDGAPTEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYDIYKYTCX
ELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNQLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYTEAPPNISKAEITM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGIQLDDKRKEMLKRHPLSVLLDLKCKDNSVL
HLTFYYLMNLNIMTVKAKVTTAVELITLIGAGDLLSPDSVLSCLYPGDHGKKTPNQANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSQSASHMETTMKLLK
TRVQARLALHKQFASLEDGIVPVTSDCQYLFPIKVVSRLVKWVIIAHEDYMELHFTKDIV
EAXLAGSTNLYYLALIERGTAKLQAAVVLNPGYSSIPPIFRLCLNWKGEKTNSNDDNIWA
MESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatccagcaaaaaacggaatcccaaagtgatccgaagtgacggagcccca
actgaagggaaacggaatcgatctgacacagagcaggaaggcaaatactacagcgaggag
gctgaggttgacctgcgggaccctggcagagactatgatatctacaagtatacttgcnag
gagctacaaaggttgatggctgagatccaggacctgaagagcaagggcagcaaggatgtg
gccattgaaattgaagaacgaaggatccagagctgtgtgcatttcatgactctaaagaag
cttaaccaattagcccacatcaggttaaagaaaggaagagatcagacccatgaggccaag
cagaaagttgatgcctaccacctgcagctgcagaacctgctctacgaagtgatgcacctg
cagaaggaaatcaccaaatgcctggagttcaagtcaaagcatgaagaaattgatctggtc
agtttagaggaattttatacagaggctccaccaaacatcagcaaggctgaaatcaccatg
ggagacccccaccaacagaccttggctcgtttggactgggagctggagcagcggaaaagg
ctggcagagaagtaccgcgaatgtctgtccaacaaggagaagatcctgaaggagattgag
gtgaagaaggagtatctgagcagcctgcagcctcgcctcaacagcatcatgcaggcttcc
ctcccagtgcaagaatacctgttcatgccatttgaccaggcacacaaacagtatgagact
gcgaggcacctgccacctcccctctatgtgctctttgtgcaggccactgcatatgggcag
gcctgtgataagacgttgtctgtggcaattgaaggcagtgtggacgaagccaaagctctc
ttcaagccccctgaggactctcaagatgacgagagtgactccgatgctgaggaggagcag
accacgaaacggcgtcgacccacccttgggattcagctggatgacaaacgcaaggagatg
ctgaaaaggcacccgctatctgtcttgcttgatctgaaatgcaaagacaacagtgtgctt
cacctgactttctactatctcatgaaccttaacatcatgacagtgaaagccaaagtgaca
accgccgttgagctgatcaccctcatcggtgcaggagacttgctgtctcctgactcggtc
ctgagctgcttgtatcctggagatcatggaaagaaaactccaaaccaagccaatcagtat
cagtttgataaagttggcatcctgactttgagagactatgttcttgacttaggtcacccc
tacttgtgggtgcagaagctgggtggcctccacttccccaaagagcagccccagcacacg
gtgatagctgaccactcacagagcgccagccatatggagaccaccatgaaactgctgaag
accagggtacaggctcgcctggctctccacaaacagttcgcatctctggaagatggcatt
gtgccagttaccagtgactgccagtacctctttcctatcaaggttgtttctcgcctggta
aagtgggtgataattgcccatgaagattacatggaactgcatttcactaaggacatagta
gaggcatgactggctgggagcaccaatctctactacctggcgcttattgaaaggggaaca
gcgaaacttcaagctgctgtggtgttgaaccctggctattcctccatcccacccatattc
cgactctgtctaaactggaaaggggagaaaaccaacagcaatgatgacaatatttgggct
atggagagcgaggtcaacgtgtgctataaggagctctgtggccctcgacccagccaccag
ctcttgaccaaccagctgcagcggctatgtgtgctgttggacgtctacctggagaccgag
agccatgatgatagtgtagagggccccaaggaatttccccaggagaagatgtgcctgaga
ctttttaggggtccaagtaggatgaagccatttaaatataaccatcctcaaggattcttc
agccaccggtga
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