Alexandromys fortis (reed vole): 126500026
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Entry
126500026 CDS
T08493
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
126500026
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mfot01001
]
126500026
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mfot04121
]
126500026
Enzymes [BR:
mfot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
126500026
Protein kinases [BR:
mfot01001
]
Serine/threonine kinases: Other
Other
126500026
Ubiquitin system [BR:
mfot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126500026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
126500026
NCBI-ProteinID:
XP_049995585
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MTTVVVHVDSKAELTTLLEQWEKDHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVEDGEQETSRDMEISF
RLDSSHKTSSRVNSATKPEEGGLKKNKSAKHGDRENFRKAKQKLGFSSSDPDRVFVELSN
SSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYID
LKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLS
YNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYD
GLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQ
SLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLL
QLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISI
ILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLSQTPKSSEHT
LAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLF
SSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQS
RISFPEKELLLLIRNHLISKGLGETATVLTREADLPMTAASHSSAFTPVTAAASPVSLPR
TPRIANGIASRLGGHAAVGASAPSAPPAHPPPRPPQGSLALPGPSYAGSSPLIGRISFIR
ERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKN
PVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFR
PISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHL
EPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAH
IYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMN
ISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDL
LEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMD
TVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDD
NNENAGEDGDNDFSPSDEELANLLEEGEEGEDEDSDADEEVELILGDTDSSDNSDLEDDI
IISLNE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagtggtacatgtggactccaaagctgagctcactaccctactggagcag
tgggaaaaggaccatggcagtgggcaggatatggtacctatccttaccaggatgtcagaa
ttaattgaaaaagaaactgaagaatatcgtaaaggagatccagacccatttgatgatcga
catcctggtcgagccgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aatgacgacttcatgaacgcactggtgaatgcgtatgtgatgacaagtagagagcccccc
ttaaatactgcagcttgcagactgctgctggacatcatgccaggtctagaaactgcggtt
gtctttcaagaaaaggaaggaattgttgaaaatcttttcaaatgggcccgagaggctgat
cagccactgaggacatactctactggactgttaggaggtgctatggaaaatcaagatatt
gctgccaactacagagatgaaaattcccaactggtggcaatagtgcttcgaagactgaga
gagctacaacttcaggaagtggctttgcggcaggaaaataagcgtcctagtccacggaag
ctttcatccgaaccgcttttgcctctagatgaggaagctgtagatatggactatggtgac
atggcagtagatgttgaggatggagagcaagaaacttctagagatatggagatctccttc
cgtcttgattcaagtcacaagaccagtagtagagtgaactcagcaactaagcctgaagaa
ggaggattgaagaagaacaagtctgcaaagcatggtgacagggagaactttaggaaggcc
aagcagaagttgggtttctcatcttctgacccagatcgtgtgtttgttgagctgtctaat
agcagctggtcagaaatgtccccctgggtgattggcaccaattacaccctctatcctatg
actcctgctattgagcagcgacttattctccagtatctgacccctctaggagagtatcag
gagttacttcctatattcatgcaacttggatcacgagaattgatgatgttttatattgat
ctgaaacagactaatgatgtcttgcttacttttgaggcactcaagcacctagcatctctc
ctgctccataacaaatttgccacagaatttgttgcacatggtggagtacagaaattactg
gaaattcctcgtccttcaatggctgcaactggtgtatccatgtgcttgtattacctgtcc
tacaaccaggatgctatggaaagagtttgcatgcatccccacaatgttctatctgatgtg
gtgaattataccctgtggttaatggaatgttctcatgcttcaggatgctgccatgctaca
atgtttttctcaatttgcttctcatttcgggctgtcttggagctctttgaccgttatgat
ggtcttcgtcgcctggtgaacttgatcagtactttggagattttaaatttggaagaccag
ggtgcacttttgagtgacgatgaaatatttgctagccgccaaacaggcaaacatacctgc
atggctctgcgcaagtattttgaggctcacctggccattaaattggaacaagtcaagcag
tcactgcagaggactgagggtggtattcttgttcaccctcaacctccatacaaggcatgc
tcatacactcatgagcagattgtggaaatgatggagtttttgatagaatatggcccagct
cagctgtattgggaacctgctgaagtcttcctcaagctttcatgtgtgcagctcttgcta
cagcttatttccatcgcctgcaattggaagacctattatgcaaggaatgacactgtgcgc
tttgctttggatgtcttggctattctcactgtggtgccaaaaatccagctccagttggca
gagtcagtggatgtactggatgaggctggctctactgtgtccactgtaggtatcagcatt
attttaggagtggctgagggtgagttctttatccatgatgctgaaattcagaagtcagca
cttcaaattatcatcaattgtgtatgtggcccagataaccggatatccagtattggtaaa
tttatttctggaacgcctcggagaaaactgtctcagacccccaagagcagtgaacatacc
ctggccaagatgtggaatgtggtccagtccaacaatggcatcaaggtgcttctgtcccta
ttgtccatcaagatgcccatcacagatgcagaccagattcgggccctggcctgtaaggcc
ctggtgggcttgtctcgaagtagcactgttcgacagattatcagcaaattgccccttttt
agtagctgccagattcaacagctgatgaaggagccagtgctgcaggacaagcggagtgac
catgtcaagttctgcaaatatgctgctgagctcatcgagcgagtatcaggaaagcctctt
ctcattggcactgatgtgtccctggcacgactacagaaagcagatgttgttgcccagtca
aggatctccttccctgagaaagagctgctcctgttgatacgaaaccatctcatttctaaa
gggcttggagagacagcaaccgtgctcacgagagaggctgacttgcccatgactgctgcc
tcacattcttctgccttcaccccagtaactgctgctgcttctcctgtctctcttccccgg
acccctcggattgccaatggcattgcaagtcgactgggcggccatgctgctgtgggtgct
tctgccccttctgccccccctgcccatcctccgccacgccctccccagggttcattggct
ttgcccggaccatcatatgcaggcagctcccctttgattggtaggatcagttttatcaga
gagaggccatcaccgtgcaatggcaggaaaattcgagtgttgcggcagaagtcggaccat
ggtgcatacagtcagagccccgccataaaaaaacaattggatagacatcttccttcccca
cctacgctggacagtatcatcacagagtatcttagagagcaacatgctcgctgcaagaac
cccgttgccacctgtccacccttttctctctttactcctcaccagtgtcctgagccaaaa
cagaggcgacaagcgccaataaactttacctcaaggctaaaccgcagggcatcatttcca
aagtatggaggggtagatggcggatgctttgataggcaccttatctttagcagatttcgt
cctatttcagtgttccgggaagctaatgaagatgaaagtggctttacctgctgtgcattc
tccgctcgggagcgatttctgatgcttggtacctgtacagggcagctgaagctctacaat
gtatttagtggacaggaagaggccagctataactgtcacaactcagccatcacacacctt
gaaccttccagggatgggtccttacttctgacgtctgcaacttggagccaacctttgtct
gcactttgggggatgaagtcagtatttgatatgaagcattccttcacagaagatcattat
gttgagttcagtaagcactctcaggatcgagtcataggcacaaaaggagacattgcccat
atttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgccaac
aactacaagaggaattgtgccacctttaatcctacagatgatcttgtcttaaatgatggc
gtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatgaat
atcagtggtgttttccatccaaatgggctggaggtcatcatcaatacagagatttgggac
cttcgaactttccatcttttacacactgttcctgctctagatcaatgtcgtgtggtgttt
aaccacactgggacagtgatgtatggagccatgttgcaggcagatgatgaagatgactta
ctggaagagaggatgaaaagcccttttgggtcgtccttccgaacatttaatgcaactgat
tataagcctatagcaaccattgatgtgaaacggaatatatttgacctgtgtacggacacc
aaagattgctatcttgctgttattgagaatcaaggcagtatggatgccctgaacatggac
acggtctgcaggctttatgaagtgggcaggcagcgactggctgaggatgaggatgaagag
gaggaccaggaagaggaagagcaggaggaagaggatgatgatgaagatgatgacgacacc
gatgatttagatgaacttgacactgaccagttgctggaggcagaactggaggaggatgac
aacaatgagaatgcaggagaggatggagacaacgacttctctccctcggatgaggagtta
gcaaaccttctagaggagggagaggagggggaagatgaagactctgatgcagatgaggaa
gtggaactgatcctgggcgacacagacagctcggacaactctgatttggaagatgacatc
atcatatctctgaatgagtga
DBGET
integrated database retrieval system
