Alexandromys fortis (reed vole): 126500254
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Entry
126500254 CDS
T08493
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126500254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126500254
Spliceosome [BR:
mfot03041
]
Complex A
U1 snRNP components
U1 related factors
126500254
Complex B
126500254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
126500254
NCBI-ProteinID:
XP_049995946
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVSAARSDWTAGKPVSLLAPLIPPRSSGQPLPFGPGGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESQPPSRGPGDGERRLSGSNLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMSGMMMSHMSQASMQPALPPGVNSMDVTAGAASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGGLITKSNLHAMIKAEESSKQEECTTSSIAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAANASTSTTPTNTVGSVPVAPEPEVTSIVATVVDNENSVTIANEEQAQIANTTAI
QDLSGDMSSSAGEEPSKQETVTDFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKR
VPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQ
RFLETHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRK
RNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRAL
EKEEEEEKQKTLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTN
MLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIIS
STKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELD
AVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRK
RSRSRSGSESDDDDSHSKKKRQRSESHSASEHSSSAESERSYKKSKKHKKKSKKRRHKSD
SPESDTEREKDKKDKDRESEKDRSRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEK
RRRTLLEQLDDDQ
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagcgaggccgaggccgggggcgaatcgccgcagagctgcgtgtcg
gccgcgcgctctgattggacagcagggaagcctgtcagtttattggccccgctgatcccg
ccccgtagctcagggcagcctttaccctttggccccggcgggcgccagccactcagatcg
ctgcttgttggtatgtgcagcggcagtggccgccgacggagcagtctgagcccgacgatg
aggccggggactggagccgagcgtggaggcctcatggtgagtgaaatggagagccaacct
ccctcgcggggtcccggggacggggagcggagattgtccggctcaaacctgtgctccagt
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcatg
cattatgcaccaatgggaatgcaccctatgggtcagagagcaaacatgcctcccgtacct
catggaatgatgccacagatgatgccccctatgggaggacctccaatgggacaaatgcct
ggaatgatgtcttcagtaatgtcaggaatgatgatgtctcatatgtctcaggcttccatg
caacctgccttaccgcctggagtaaacagtatggatgtaactgcaggtgccgcatctggc
gcaaaatcaatgtggacagaacataaatcacccgatggaaggacttattattataatact
gaaacaaaacagtctacctgggaaaaaccagatgatcttaaaacacctgctgagcaactc
ttgtctaaatgcccgtggaaagagtacaaatctgattctgggaagccttattactataat
tctcagacaaaagagtcccgatgggccaaacccaaggaacttgaggatcttgaaggatac
cagaataccattgttgctggaggtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagcaagcaagaagaatgtactacatcatccatagccccagttcctaca
acagaaattccaaccactatgagcaccatggctgctgcagaagcagcagctgctgttgtt
gcagctgctgcagcagctgctaatgccagtacttccaccacacctactaatactgtcgga
agtgttccagttgctcctgagcctgaagttacttccattgttgctactgtagtcgataat
gaaaattcagtaactatagccaatgaagaacaagcacagattgctaataccacggctatt
caagatctaagtggtgacatgtccagtagtgctggagaagaaccttctaaacaagaaact
gtaaccgattttactcctaaaaaagaagaggaagagagccaacctgcaaaaaaaacatat
acttggaatacaaaggaggaggcaaagcaagcatttaaagaattattgaaagaaaagcgg
gtaccctccaatgcttcatgggaacaagctatgaaaatgatcattaatgatcctcggtac
agtgcgttagcaaagctgagtgaaaaaaagcaggcttttaatgcctataaagttcagact
gagaaagaggaaaaagaagaagcaagatcaaaatacaaagaagctaaggaatcttttcag
cgatttctagaaactcatgagaagatgacttccacaaccagatacaaaaaagccgagcaa
atgtttggggagatggaagtttggaatgctatttcagagcgtgatcggcttgaaatctat
gaagacgttttgttcttcctttcaaaaaaagaaaaggaacaagcaaagcagttacgaaag
agaaattgggaagccttaaaaaacatacttgacaatatggctaatgttacgtattctact
acttggtctgaagcccagcagtatctaatggataacccaacatttgcagaggatgaagag
ttacagaacatggataaagaagatgcattaatatgctttgaggaacatatccgggcttta
gaaaaggaagaagaagaagaaaaacagaagactttattgagagaaaggaggcggcagcgt
aaaaatagggaatctttccagatatttttagatgaattacatgagcatggacagctacat
tctatgtcatcttggatggaactgtatccaactattagttctgacattagattcactaat
atgcttggtcagccggttttttcattaggatcaactgcacttgatcttttcaagttttat
gttgaagatcttaaagcgcgttatcatgatgaaaaaaagataataaaagacattcttaag
gataaaggatttgtagttgaagtaaatactacttttgaagattttgtggcgataatcagt
tcaacaaaaagatcaactactttggatgcgggaaatatcaagttggctttcaatagttta
ctagaaaaggcagaagcccgtgagcgtgaaagagaaaaagaggaagcacggaaaatgaaa
agaaaagagtctgcatttaagagtatgttgaaacaggctgctcctccgatagagctggat
gctgtttgggaagatatccgagagagatttgtaaaagaaccagcatttgaggacataact
ctagaatctgaaagaaaaagaatatttaaagatttcatgcatgtgcttgagcatgaatgc
caacatcatcattcaaagaacaagaaacattctaagaaatccaaaaaacaccataggaaa
cgctcccgttctcgatcgggatcagaatcagatgatgatgacagccattcaaagaaaaaa
agacagcgatcagagtcccattctgcttcagaacattcttctagtgctgagtccgagaga
agttataagaaatcaaaaaagcataagaagaaaagcaaaaagaggagacataaatctgat
tctccagaatcagatactgaacgagagaaggataagaaagataaagaccgggaaagcgaa
aaggacagaagtagacagagatcagagtcaaaacacaaatcacctaagaaaaagactgga
aaggattctggtaactgggacacctctggcagcgagctgagtgaaggggaactagaaaag
cgcagaagaacacttctggagcaactggatgatgatcaataa
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