Microtus fortis (reed vole): 126500754
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Entry
126500754 CDS
T08493
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
mfot
Microtus fortis (reed vole)
Pathway
mfot04151
PI3K-Akt signaling pathway
mfot04510
Focal adhesion
mfot04512
ECM-receptor interaction
mfot04820
Cytoskeleton in muscle cells
mfot04974
Protein digestion and absorption
mfot05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126500754
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126500754
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126500754
09142 Cell motility
04820 Cytoskeleton in muscle cells
126500754
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126500754
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
126500754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfot04147
]
126500754
00536 Glycosaminoglycan binding proteins [BR:
mfot00536
]
126500754
Exosome [BR:
mfot04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126500754
Glycosaminoglycan binding proteins [BR:
mfot00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126500754
Hyaluronan
Extracellular matrix or blood plasma proteins
126500754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
YcaO
ETF
Motif
Other DBs
NCBI-GeneID:
126500754
NCBI-ProteinID:
XP_049996856
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MGTRRPARNMRLAHALLPLLLQACWVAAQDIQGPKAIAFQDCPVDLFFVLDTSESVALRL
KPYGALVDKVKSFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDE
LKASVDAIKYFGKGTYTDCAIKKGLEELLIGGSHLKENKYLIVVTDGHPLEGYKEPCGGL
EDAVNEAKHLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGHSLDAEETISQTI
DTIVEMIKNNVEQVCCTFDCQAARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDL
GPVGYQGMKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGFPGLPGCKGSPGFD
GVQGPPGPKGDAGAFGLKGEKGEAGVDGEAGRPGSSGPTGDEGDPGEPGPPGEKGEAGDE
GNAGPDGPPGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGIPGDPGDAGPI
GPKGYRGDEGPPGPEGLRGAPGPVGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGNRG
PPGINGTKGYPGLKGDEGEVGDPGEDNNDISPRGVKGAKGYRGPEGPQGPPGHVGPPGPD
ECEILDIIMKMCSCCECTCGPIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSKDELVK
FEPGQSHAGVVQYSHNQMQEHVDMRSPNIRNAQDFKEAVKKLQWMAGGTFTGEALQYTRD
RLLPPTQNNRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGFVAGSDQLNVI
SCQGLLSQGRPGISLVKENYAELLDDGFLKNITAQICIDKKCPDYTCPITFSSPADITIL
LDSSASVGSHNFETTKVFAKRLAERFLSAGRTDPSQDVRVAVVQYSGQGQQQPGRAALQF
MQNYTVLASSVDSMDFINDATDVNDALSYVTRFYREASSGATKKRLLLFSEGNSQGATAE
AIEKAVQEAQRAGIEIFVVVVGPQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPNYQALL
RGVFYQTVSRKVALG
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgcaggccagccagaaacatgaggctggcccacgctctgctgcccctgctg
ctacaggcctgctgggtggccgcacaggacatccagggccccaaggctattgccttccaa
gactgccctgtggatctattcttcgtgctggacacctcggaaagtgtggccttgaggctg
aaaccctatggggccctggtggacaaggtgaagtccttcaccaagcgcttcatcgacaac
ctgagggacaggtactaccggtgtgaccgtaacctggtttggaatgcgggtgccctgcac
tacagcgatgaagtggagatcatccgagggctcacgcgcatgcccagtggccgcgatgag
ctcaaggctagcgtggatgccatcaagtacttcggcaaaggcacctacacggactgcgcc
attaagaaggggctggaggaactgctcatagggggctcccacctcaaggagaacaagtac
ctgatcgtggtgactgatggacaccccctagagggctacaaggaaccatgtgggggcctt
gaagatgcagtcaacgaggccaagcatctgggcatcaaagtgttctcagtggccatcaca
cctgaccacctagagccacgtttaagcatcatcgccacagaccacacataccggcgcaac
ttcacagcggcggactggggacatagccttgatgccgaagagaccatcagccagaccatt
gacaccattgtggaaatgattaaaaataacgtggaacaagtgtgctgtacctttgactgc
caggctgccagaggtcctcctggtccccgaggtgaccccgggtatgagggggaacgagga
aagccaggtcttcccggagagaagggagaagctggagaccctggaagacccggagatctt
gggccagtcgggtaccagggtatgaagggagaaaaagggagccgcggagagaagggctcc
cgaggaccgaaaggctacaagggtgagaaaggcaagcgcggcatcgacggggtagacggc
atgaagggggagacagggttcccaggactaccaggctgcaagggctctccaggattcgat
ggcgttcaaggacccccaggtcccaagggtgatgctggtgcctttggattgaagggagag
aagggtgaagctggagtggatggcgaggctgggagaccaggaagctcagggccaactgga
gatgagggagatccaggagagcctggtccccccggagagaaaggagaggctggtgatgag
gggaatgctggcccagatggaccccctggagagaggggtggccctggtgaaagaggacct
cgggggacccctggtgtgaggggcccaaggggagacccgggtgaagctggaccacaaggt
gaccaaggaagagaaggccccgtcggcatccctggagatccgggtgatgctggcccaatt
ggacctaaaggataccgaggtgatgagggtcctccaggccctgagggtctcagaggagct
ccaggaccagttggacccccaggagacccaggactgatgggtgaaaggggtgaagatggt
ccaccaggaaatggcacagaaggtttccccggcttccctgggtatccaggcaacagaggc
ccccctgggataaacggcacaaaaggctaccctggcctcaagggagatgagggtgaagtt
ggagacccgggagaggataacaacgacatttcaccccgtggggtcaaaggagcaaagggg
taccgaggccccgaaggaccccagggacctccgggacacgtgggaccacctggcccagat
gagtgcgagattttggacatcatcatgaaaatgtgctcctgctgtgagtgcacatgcggc
cccatagacatcctcttcgtgctggacagctccgagagcattggcctgcagaactttgag
attgcaaaggacttcatcatcaaggtcattgaccggctgagcaaggatgagttggtcaag
tttgagccaggacagtcacacgcgggcgtggtgcagtacagccacaaccagatgcaagaa
cacgtggacatgcggagccccaacatacgcaacgcccaggacttcaaagaagctgtcaag
aaactgcagtggatggctggcggcacgtttaccggagaagcgctgcaatacacccgggat
cggctacttccacccactcagaacaaccgaatcgctctggtcatcaccgatgggcgctct
gacactcagcgggacacaacgcccctcagtgtgctttgtgggccagacattcaggtcgtt
tctgtgggcatcaaggatgtgtttggctttgtcgcgggctccgaccagctcaatgtcatt
tcctgtcaaggactgttgtcgcaaggccggcccggtatctccctggtgaaggagaactat
gccgagcttctagatgacggctttctgaagaacatcacggcccagatctgcatagataag
aagtgtccggattatacctgtccaatcaccttctcctccccggctgacatcaccatcctg
ctagatagctcagccagcgtgggcagtcacaacttcgaaaccaccaaggtgttcgccaag
cgcctagctgagcgcttcctgtcagcaggcaggacggatccctcccaggacgtgcgggta
gccgtggtccagtatagtggccaaggccagcaacagccggggagggcagctcttcagttc
atgcagaactacacggtgctggccagctctgtggacagcatggatttcatcaacgatgcc
acggatgtcaacgacgccctgagctacgtaactcgcttctaccgggaagcctcatccggg
gccaccaagaagagactcctgctgttttccgaaggcaactcacagggggccacggcagag
gccattgagaaggctgtgcaggaggcccagcgtgcaggcatcgagatctttgtggtggta
gtgggaccccaggtgaatgagccccacatccgtgtactcgtcaccggcaagaccgcggag
tatgacgtggcctttggtgagcgccacctattccgtgtacccaactatcaggccctgctt
cgtggtgtattctaccagacagtctccaggaaggtggcactaggctag
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