Alexandromys fortis (reed vole): 126500853
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Entry
126500853 CDS
T08493
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mfot03037
]
126500853
04040 Ion channels [BR:
mfot04040
]
126500853
Cilium and associated proteins [BR:
mfot03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
126500853
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126500853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
GPS
PKD_channel
Motif
Other DBs
NCBI-GeneID:
126500853
NCBI-ProteinID:
XP_049997049
LinkDB
All DBs
Position
Unknown
AA seq
2610 aa
AA seq
DB search
MSLPSVMIRSIRNSASPCFCLRWLCQAERADASFSSLQQGALCCPKKGVFCCKELSSAED
LFKKLLLSFSETPPGIACTCSLPTSWYHPESPSPLTRHPTGPIPATQPENPGHFAINCFP
DTDAPALPALGIRVYPASGSLLRLLVDFGDGCGAEMRLCPMTGAAAVTSCHRYRKGHHTS
ALSSFPEGVYKLRAVVHDVHGSDVELGPYYMNIGHENVSVFMNSSSIHEGEALSLANSLP
QQKGTVVTHGFSSVSSYNVSFVSQPPVGSGQAWLGVTVGYKMQPVSIYTNGTVFAADTDI
TFVAVTKETIPLEFVWYFGDDPPVRTTSRSLRRRLSIPQRYHVMVEAISRMGSVASESHL
IRVQKRITANRLMSPASALVNANVSFECRLNFGTDVAYLWNFGDGTTEVGSSSSSHVYSR
EGEFTVEVLAFNNISSAVLRKPLFIVHEPCQPPPVKNMGPKKVQIWRSQPLRLAVTLEAA
VLCNISQGLSYTWTIVDAEATAVTLPAALNTLGQTIVLPSYTLECGNYTATAKVQIKGSM
VYSNYCVGVEVRARAPVSVISEGTHIFIPRTTTTSIILRGFQSYDPDNPGAALRYHWTCT
AASSPRWSCFEDSTPYQVDTQAPAISFPAKWLSGCCDQFLVTLIVSSNGQNSSQALIFLS
TRSDPDFRFVYISWVNFKDIRVNWNEELSLRAVCEDCDDIPDLTYSWDLFLVNATEKNTV
EGSFGSQASTASVLFRFLCFQDYVRYCIPQPRGGNGQSKLSDNIFASQVDMLITVRLLGA
SASGAILKLSQSDLQSSPRGSPTRHSPERSPMPPSWTALHNLGSIYSESAAGGHHISAVV
GPMAGSGEPMEDSSSLSPAPGSLDEEALKMGAPEGSWLPSSSSPAFDDFEAYYSDIQEDV
PSPGRQPGTGTNFQESGPSMNAQESASDGDNLLGPFLHTGRAKPALMIDWPKALVSRAVF
HSYTSSGIMGPDVTIRPFSLSSGEMYVFQASVASKKALLGKAQLYITVNQVPQDMSCQVR
PHSGMEAHTVFSVFCMSGKPDFHYEFRYRVGNTSPHTLYSGRDTQYYFLLPAGETSNNYK
VIVSTEITDGQGSKVQPCSAEVTVLPRYQGNDCPDKDLYDSTLDTLSSLQLVGSYTEVRN
YIAMTTVILSRLYVESRNTSTCSLWSQIQDVLISSACRVPLTDQEAMVDSIHILRDLISF
PNKLSSMSAVYVLEYAQMLLAQGPFSRELLVNKNLGVELILLISGVWEAAKEDGRKEDSL
QEEGMKIISDMLLTCLSLGHQHQLHISTGKMEFWTLLHHSFQKSSQNLGFIWVHFPGDLA
LHRPAQEASQSPCYISQLMFFMNSPYPEGRAPGQVGSVVSPRLYSCKSRSPILRGRLETP
VTVEFGEEDYLVKTRHPTVFTLLRDEVNLHRFTGLSENPQETLQIRIKFLNPRRRAFPVM
LLVRFSKKATPSDFLVKQVYFWDEQTVQIYVPALPWKGADVGYLSLLDADYDRRPPNKYL
AGAVNYTVHFQWIQCVFWDKTEWRSEGPCPQSGTSPERVNCSYHRLAPFSVLRRKLNATF
EVSSISEFRSDPHNLLPGIFSVFLLVLYGILVTKSRCIHCHKKRKPGCIFLEGDTAPGHQ
LYAVIVDTGFRSPAQFTSKVFIVLCGENGLSETKELCCPEMSLFGRNSRHTFILSTPNQL
GPLQKIHLWHDSSGPAPNWFVSHVMVKELHSGQGWFFSAQCWLAVSLCDGRVHRELFCLR
RGLGFWKLFYAKFTEYLEDFHIWLSLYSQPPSSSYLHTQRLAVAFCLLCVYSCLTALVTV
GVHEQRPLDVGPTLESFRLGLLCTFLACPAAQLLSLLFRFSKHPASDILPGTDRAWRMAA
NSSGVTCSPFLAPREKSHHPPPSSQAPSSGFEGRMLQWSRVCLRWSSSVVWAICGLTSLA
CGLGTGFLGYRFMTEQCIQWLYLLLLSVVCCVFVTQPLMICLAALAFAWKKKHDSQFFTE
SLRDATKNLDLELEEYSRTHLRLSPNSHSPDSAEEAERVLAVRQRDHHLRWAQPPSRAKF
RVTRERLRKENRMQAALRGISTHSLMLLLLLFITHGRVCPGEYSLNQAIRKAFTRNARHS
FGNLNSTDDWWDWTLSMLLDGLHPEGPSAGALGAQPAALGGQCHLIGPAVIRQLMVSSGT
ACTPPRPVSEPTEDVPPTLNHNLDLENLKVTPSSPEACGAMKKISVYSLGRTRHEVDVAL
TALRTSRWVDHCTRAVSVHFTLYNPPTQLFTSVTLGAELLPTGGLVPSSLVESISIYGDS
APRYLLVLSELVFLVLNVTHLCFQLWGMTTKGVLSYWRKPRHWLELSTVGVALAYHAASG
HLTSLAENVTDQFHKGLHQMFVDLSLMMSWNQRVRWLRGSLLFLWMLKCAHLLGLLSSRA
AFAAVMRSSLSRALAPALSGALSLAAYSHLCRFLLFTGTPSPDTSTDAFPELLLLQFLGR
NQKDSLRNRLESGHRAVACYCGALFLLLAALCFGMLRASLLTFFRKGKSSQRKSHVTLTN
VAVYAWHKVLAILGLETTLEETEVATDQNYYLDEFSSLLDELLLKIDGLSESLELSSLEN
QWGRTVEPRTEDSPLVGIPGYHATATREWQ
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccttctgtcatgatcaggagcatcaggaacagcgccagtccctgcttctgt
ctccggtggctgtgccaggctgaaagagcagacgcatcgttctctagtctgcagcagggc
gccctctgctgcccgaagaagggagttttttgctgcaaagaactgagctctgcggaagac
ctgttcaagaagctgcttctgagtttctcagagactcctcccggcatcgcttgcacctgc
agcctccccacatcctggtaccaccccgagagtccctctcccctcactcggcatcctact
gggcccatcccagcgacacagcctgaaaaccctgggcactttgccatcaactgcttccca
gacacagacgctccggcgcttccagctctgggaatccgtgtctaccctgcttccggatca
cttcttcgtctgctggtggactttggggacggttgcggagctgagatgagactgtgtcca
atgacaggcgcagctgcagtgactagctgccaccggtacaggaaaggccatcatacgtct
gctttgtcttcttttccagaaggagtctacaagctcagggctgttgtccatgacgtccac
ggatctgatgtggaactggggccgtactacatgaacattggccatgagaacgtgtctgta
ttcatgaactccagctctatccacgagggtgaagccctctccttggccaactccctccca
cagcagaaaggcacagtcgtgacgcatggcttttcttctgtgtcctcatacaacgtgtcc
tttgtttctcagcccccagtgggcagcggccaggcttggcttggtgtgactgtcgggtat
aagatgcagcctgtgtccatctacaccaacggaactgtgtttgctgcagacacagacatc
acatttgtggctgttaccaaggaaaccatacccctggagtttgtatggtatttcggagat
gacccacccgtgaggacaacttccagaagccttagaagaaggctgagcatccctcagcgg
taccacgtgatggtcgaggccatcagccggatgggcagtgtggcctctgagtcccacctc
atcagggtacagaagagaatcacggccaatcggctcatgtccccggcctcagccctggta
aatgccaacgtgtcctttgagtgcaggctcaactttggcacggatgtagcctatctttgg
aacttcggagatggtaccaccgaggtgggcagcagctcctccagccatgtttacagcagg
gagggtgagtttacagttgaagtcctggccttcaacaatatcagctccgccgttctaagg
aagccgcttttcatcgtgcacgagccttgccaaccacctccggtgaagaacatggggcct
aagaaggttcagatatggcgctctcagcccctgagactggcagtgacactggaagctgca
gtcctctgtaacatttcccaagggctttcctacacctggaccattgtggacgctgaggcg
actgccgtcaccctccctgctgccctcaacacccttgggcagaccatcgtgctccctagc
tacaccctagagtgtgggaactacactgccacggccaaggttcagatcaagggaagtatg
gtgtatagcaactactgtgttggtgtggaggttcgagccagggctcctgtcagcgtgatc
tctgaaggcacccacatcttcatccccaggaccaccacaacctccatcatcctcagaggc
ttccagtcctatgaccctgacaaccctggggcggctctcaggtatcactggacttgcacc
gcagccagctcaccaaggtggtcctgctttgaggactctactccataccaagtagacact
caggctcctgccatttccttcccagcaaaatggctcagtgggtgctgtgaccagttcctt
gtgaccctgatagtctccagcaatgggcagaactcttctcaggccttgatattcctgtcc
acccgttcagacccggacttcagattcgtctacatctcgtgggtcaactttaaagacatc
cgtgtaaactggaatgaagaactgtctctccgagctgtgtgtgaagactgtgacgatata
cccgacctcacttattcctgggatctcttcctggtcaatgcgacagaaaagaataccgtg
gaagggagttttggcagccaagcctccacggcctctgttctgtttcgcttcttgtgtttc
caggactatgtaaggtactgcatacctcagccccgaggtggcaatggtcagtccaaactc
tcagacaatatcttcgcctcgcaggtagacatgcttatcactgtgaggctgctgggcgct
tcagcatccggggccattctgaagttgtctcagtcagacctgcaatcaagcccaagagga
tccccgacacgacactcaccagagcggtcacccatgcccccgagctggacagctcttcac
aacctgggaagcatttactctgagtccgcagcgggaggacaccacatttctgcagtggtg
ggtcccatggcaggctccggggagcccatggaggactccagctcactgagtccagctcca
ggttccctggatgaggaagctttgaagatgggcgccccagagggaagctggcttccttct
agctcctcccctgcctttgatgattttgaagcctattatagtgacatccaagaagacgtg
ccgtcccctggaagacagccagggaccggtaccaacttccaggaatcgggaccaagcatg
aatgcccaggagagtgccagtgatggggacaatctgctgggccctttcctccacacaggc
agagcaaagccggctctcatgattgactggcccaaggccctggtcagccgagctgtcttc
cacagctacacctcctcaggtatcatgggaccggatgtgacaataagaccattctcactg
agcagtggcgagatgtatgtctttcaggcgtctgtagcttcaaaaaaggccttactaggc
aaagctcagctctacataacggtcaaccaggtcccacaggacatgtcctgtcaggtgcga
ccccacagtggtatggaggcccataccgtcttcagtgtcttctgcatgtcagggaaaccg
gacttccattatgaatttcgctaccgggtaggaaacacttctccacacaccctgtacagc
ggacgagatacccagtactacttcctattgccagctggtgagacctcaaacaattacaaa
gtcattgtttctaccgagatcacagatggccaaggctccaaggtgcagccgtgcagtgcg
gaagtgactgtgctaccccgttaccagggaaatgactgccctgacaaggacctatacgac
tccaccctggacaccctgtcttctctccagctggtgggaagttacacggaagtcaggaac
tacatcgctatgaccactgtgatcctgagccgtttgtatgtggagagcagaaacacatcc
acctgtagcctatggtcacagatacaggacgtattgatttcttcagcatgcagagttcct
ttaacggaccaggaagcaatggtggactctattcatatactgagagacctcataagcttc
cctaataagttgagctccatgagtgctgtgtacgttctcgaatatgcacagatgctcctg
gcccaaggtccgttctccagggagttgctggtcaacaaaaacctgggagttgagcttatc
cttctcatctctggagtctgggaagctgccaaggaagacgggagaaaggaggactctctg
caggaagaaggcatgaagataatctctgacatgttactaacctgtctctccttgggccac
caacatcaacttcacataagcactgggaagatggagttctggaccctgctccatcacagc
ttccagaagtctagtcagaacctgggcttcatctgggtccatttccctggcgacctggcc
ttgcaccgtcctgctcaagaggcatcccaaagcccatgctacatcagccagctcatgttc
ttcatgaacagcccttacccagagggacgagctcctggacaggtgggcagcgtggtgagc
cctagactctacagctgcaagagcagaagccccattctcagaggacggctggagacacct
gtgaccgtggagtttggggaggaagactacctggtaaagacaagacatccaaccgtgttc
accttgcttcgggatgaggtgaatctccaccggttcaccgggctttctgaaaatccccag
gaaaccttacagatacgcatcaaattcttgaatcccagaagaagagccttccccgtcatg
ctgctagtaaggttctccaagaaggccacgccttcggattttcttgtgaagcaggtgtac
ttctgggatgagcagactgtgcaaatttatgtacctgctcttccgtggaaaggagccgat
gtggggtatctgtccctgctagatgctgattatgacaggagacctccaaacaaatacctt
gctggtgcagtaaactacacagtgcatttccagtggatccagtgtgtgttttgggacaag
acagagtggagatccgaaggtccctgtccgcagtctggaacttctcctgagagagtcaac
tgtagctaccatcgcctggcgcctttctctgtcctcagaagaaagctgaatgccactttc
gaagtgagcagcatttctgagttccggagtgacccacataatttgcttcccgggattttc
agtgtgtttctcttggttctttatggaatcctggtgactaaaagcagatgtatacattgt
cacaagaaaaggaaacctggctgtatttttctggaaggagacaccgcacctggccaccag
ctgtatgcagtcattgttgacactggcttccggtcaccagcccaatttacatcaaaggtc
ttcattgttttatgtggtgaaaatggactctcagaaaccaaagaactctgctgcccagag
atgtccttatttggaaggaattccaggcacacctttatactgagcacccctaaccagctg
ggtccactccagaaaatccacctgtggcacgacagtagtggaccggccccaaactggttc
gtcagtcacgtgatggtgaaggaactacactcaggccaaggctggttcttctctgcccag
tgctggctggctgtgagcctatgtgatggccgtgtgcatagagaactcttctgcctgcgc
cgtggtctaggcttctggaagcttttctatgccaagttcacggagtacctggaggatttc
cacatttggctctcactgtacagccagcccccctccagcagctacctgcacacacagcgg
cttgccgtggccttctgtctcctgtgtgtctattcgtgcctcactgccctggtcactgtg
ggagtccatgaacagcgcccgctggatgtgggtcccactctggaatccttccgtctgggt
ctcctgtgcacctttctggcctgtccagctgcccagctattgtctctgctcttcaggttc
agcaagcaccctgcatcagacattctcccaggaactgacagagcttggaggatggcagcc
aatagcagtggtgtgacctgttcaccctttcttgctccgagagagaagagccaccaccct
cctcccagttcacaagctcccagcagtggttttgaagggcgtatgctccagtggtcaagg
gtctgtctgcgctggtcaagctctgtggtctgggccatttgtgggttgacgtccctggcc
tgtggcttggggacaggattcctaggctacaggtttatgacagagcagtgtatacagtgg
ctgtacctgctgcttctctctgtggtctgctgcgtatttgtcacccagccactcatgatc
tgtttggcagcgctggcctttgcttggaaaaagaaacatgacagtcagttttttactgag
tctttacgagatgcaaccaagaatctagacttggaattggaagaatactccagaacccac
cttcgtctttctcccaactcccatagtcctgacagtgctgaggaggccgaaagggtcttg
gctgtgcgacaacgagaccaccacctgcgctgggctcagccaccatccagggccaagttc
agagtgaccagggagagactgaggaaagagaaccggatgcaggcagcactgagaggcatt
tccacgcacagtctcatgttgctgctgcttttgtttataacacatgggagagtctgcccg
ggtgaatattctctcaaccaagccatcaggaaggcatttacaagaaatgccagacactcc
tttgggaacttgaacagcacagacgactggtgggactggactctgagcatgttgctggac
gggctgcacccagaaggaccctctgctggagccctgggggctcagcctgcagctctcgga
gggcagtgccacctcataggccctgcggtgatcaggcagctcatggtttcttctggtact
gcatgcacgcctcccaggccagtctcagaacccacggaagatgtaccacctacgctgaat
cacaaccttgaccttgagaacctaaaagtgacccctagtagtcctgaggcctgtggggcg
atgaagaagatctccgtgtacagcctaggaagaacaaggcatgaagtcgacgtagccctg
actgccctcaggaccagcaggtgggtggaccactgcaccagggccgtgtctgtgcacttc
actctctacaaccctcccacgcaactcttcaccagtgtgaccctaggtgcagagcttctc
cccacgggaggtcttgtcccctcatccctggtcgagtcaatcagcatctacggtgactca
gccccacgctaccttcttgtgctttctgagctggtgttcctagtcctcaacgtgacccac
ctctgtttccagctctggggaatgaccaccaagggcgtcctcagctactggaggaaacca
agacactggctggagctctctacggttggggtagccctggcctaccatgcagcctctggt
cacctcactagccttgccgagaatgtcactgaccagttccacaaaggacttcaccagatg
tttgtggacctaagtctgatgatgtcatggaatcagagggtaagatggctccggggaagc
ctgctgttcctctggatgttgaaatgtgctcacctcctcggcctcctaagcagcagggca
gccttcgccgcagtgatgcgttcgtctctctccagagccctggcacccgcactgtcaggg
gccctgtcgctggctgcctattcccacctgtgccggtttctgctcttcaccgggacgcca
tcacccgacacctctacagacgcatttcctgagctgctgctgcttcagtttctgggaaga
aaccaaaaggactcactgcgcaatcgcttggagtctgggcatcgagccgtggcttgttac
tgcggggccctgtttctgctgttggccgctctgtgtttcggaatgctgagggcttccctc
ctgacttttttccgaaaaggaaagtcttctcaaagaaaatctcatgtgacacttacaaat
gtcgctgtttatgcatggcataaagtcctcgccattttgggactggaaacaactctggag
gagactgaggtggctacagatcagaattattacctggatgaattttcaagcctattggat
gaacttctgctaaagattgatggtttgtctgaaagcctagaactctctagcctagaaaac
cagtgggggaggacagtggagccaaggacagaggacagtcctctcgtcggcattccaggg
taccatgctactgcgacaagagaatggcagtaa
DBGET
integrated database retrieval system
