KEGG   Alexandromys fortis (reed vole): 126500959
Entry
126500959         CDS       T08493                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mfot  Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mfot03041]
    126500959
Spliceosome [BR:mfot03041]
 Complex B
  Other components
   Complex B specific factors
    126500959
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 LisH_TPL Beta-prop_WDR75_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_BBS7 Beta-prop_DCAF12 TFIIIC_delta Beta-prop_IP5PC_F VPS8_N DUF7165 PROPPIN Beta-prop_WDR11_2nd WD40_like Beta-prop_NOL10_N PA14 LisH
Other DBs
NCBI-GeneID: 126500959
NCBI-ProteinID: XP_049997271
LinkDB
Position
Unknown
AA seq 604 aa
MEGAAGSVTKCCATESVLRWAWTRSDTTMSIEIESSDVIRLIMQYLQENSLYRALATLQE
ETTVSLNTVDGIESFMADINSGHWDTVLQAIQSLNLPDKTLIDLYEQVVLELIELRXLGA
VTSLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGE
VSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRDKAAVKDVEEEKFPTQLSRHIKFG
QKSHMECSWFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDRKYQAQDNFMMMDDAVLCMCF
SRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR
IYGLKSGKTLKEFQGHSSFVNKATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGS
TAGTDIAVNSVILLPKNLEHFVVCNRSNTVVIMNMXGQIVRSFSSGKREGGDFVCCALSL
RGEWIYCAGEDFVLYCFNTVTSKLERTLTVHEKDVIGIAHHPHQNLTATYSEDGLLKLWK
PQVSFTMETCSCVTFTFHICLCKQTKGGSLPFFDRNYLLVSQQVFIHNKQYKVKIARHTR
KIRC
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggagggggccgccggaagtgtcacgaagtgttgtgcgaccgagtctgtactgagatgg
gcctggacccggagcgataccactatgtccatcgaaatcgagtcttccgatgtgattcgt
ctcatcatgcagtacttgcaggagaacagtttgtaccgggcattggccaccttacaggag
gagactactgtctctctcaacactgtggacggcattgaaagtttcatggctgacattaac
agtggccattgggatactgttttacaggctatacagtctctgaacttgccagacaaaacc
cttattgatctctatgaacaggttgttctggaactgatagaacttcgtnggttgggtgct
gtcacgtcccttctgagacagacagaccccatgattatgttgaagcaaacacagccagag
cgctatattcatctggaaaacctcttagccaggtcttactttgatcctcgtgaggcctat
ccagatggaagcagcaaagagaaaaggagagctgcgattgcccaggcattagctggagaa
gtcagcgtggtgcctccatctcgtctcatggcattgctgggacaggcgttgaagtggcag
caacaccagggcttgcttcctcctggtatgaccatagatttgtttcgagacaaagcagct
gtcaaagacgtggaagaagaaaagtttcccacacagctgagcaggcatattaagtttggt
cagaaatcgcacatggagtgttcttggttctctccagatggtcagtatctggtcactgga
tctgttgatggatttattgaagtgtggaacttcactacaggaaaaatcaggaaggatcgt
aagtaccaggcccaagataacttcatgatgatggatgatgctgtcctctgcatgtgtttc
agccgagatactgaaatgttagcaacgggggcccaagatggaaagattaaggtgtggaag
attcagagtggacagtgtttaaggagatttgaaagggcacacagtaaaggtgtcacctgt
ctaagcttttcaaaggacagcagtcagatcctcagtgcatcttttgaccaaacaataaga
atttatggtttaaaatctggaaaaacactgaaggaatttcaaggccattcctcctttgtt
aacaaggcaacatttacccaggatggacattacattatcagtgcatcttctgatggcact
gtgaagatctggaacatgaagaccacggaatgttcaaatacctttaaatcattgggcagt
actgcagggacggatattgccgtcaatagtgtgattctgcttcctaaaaacctagagcac
tttgttgtgtgcaaccgatcaaacacagtggtcatcatgaacatgtaggggcagattgtc
agaagcttcagttctggtaagagagaaggtggtgacttcgtttgctgtgccctctctctc
cgcggtgagtggatctactgtgctggggaggacttcgtgctctactgcttcaacacagtc
accagcaagctggagagaactctgacggttcatgagaaggatgtgattgggattgcacac
cacccgcatcagaacctgactgctacctacagtgaggatggactcctgaagctctggaaa
ccccaagtctcttttacaatggagacctgttcctgtgttacttttacttttcatatctgc
ctttgtaagcaaaccaaaggaggaagtctgcccttcttcgatagaaactatttacttgtg
tctcagcaagtctttatccacaataaacagtataaagttaaaattgccagacacacaagg
aagatacgttgttag

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