Alexandromys fortis (reed vole): 126501092
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Entry
126501092 CDS
T08493
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mfot04040
]
126501092
Ion channels [BR:
mfot04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
126501092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Musclin
Motif
Other DBs
NCBI-GeneID:
126501092
NCBI-ProteinID:
XP_049997521
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MEDRYYPVIFPDERNFRPFTSDSLAAIEKRIAIKKEKKKNKDTTAAEPQPRPQLDLKASR
KLPKLYGDIPHDLIAKPLEDLDPFYRDHKTFMVLNKKRTIYRFSAKRALFILGPFNPVRS
LVIRISVHSLFSVFIICTVVVNCMFMANFGDRISDMEISEYIFTGIYILEAVIKILARGF
ILDEFSFLRDPWNWLDFIVIGTAIATCFPGTKVNLSALRTFRVFRALKAISVVSGLKVIV
GALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGILNQKCVKTNCGPNPTSNMDCFVKQN
NSDDFVMCGTWFGSSSCPNDSTCNKTSFNPDYNYTNFDNFGWSFLAMFRVMTQDSWEKLY
RQILRTSGIYFVFFFVVVIFLGSFYLLNLTLAVVTMAYEEQNRNVAAETEAKEKMFQEAQ
QLLREEKEALVAMGIDRSSLNSLQASSFSPKKKRFFSSKTRKSFFMRGSKRDRASSESKD
DSAKNPQLLEQTKRLSQNLPVDLFDEHMDPFHRQRALSAVSILTITMQEQEKSQEPCLPC
GKNLASKYLVWDCSPQWLCVKKILRTVMTDPFTELAITICIIVNTVFLAMEHHDMDDTFI
NLLKIGNWVFTGIFVAEMCLKIIALDPYHYFRHGWNVFDSIVALLSLADVLYTNLSDKSS
RSNRSFLASFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMQL
FGTKFNKTVSTGQEQRTRRWHMGDFYHSFLVVFRILCGEWIENMWECMQGMDGSPLCVIV
FVLIMVVGKLVVLNLFIALLLNSFSNEERDGQPEGETRKTKVQLALKRFRRAFSFMGRAL
QNFCCKRCRRQNSPKPKEIPGSFDSESKDSIPLDTKPWKEFDAQMILDSGHGRPRLAPLA
EEEDDFECFDEFRASRISQAGAEVQTCDVPLETKQPTSPDDQGVDPEVFSEEDPHLAIQS
ARKKSDAASVLSECSTIDLNSFINFRNMDTPKKQPDRCLPKSLGCHFLCHKRNKRKPCWV
VWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDINISSRPHIERLLRCTDNIFTFI
FILEMILKWVAFGFRRYFTSAWCWLDFLIVIVSVVSLTNSPSLKSFRTLRALRPLRALSQ
FEGMKVVVNALISAIPAILNVLLVCLIFWLIFCILGVNFFSGRFGRCINGTDINKYLNHT
EIQNRSQCKDSNFSWEVPKVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRGKDEQPGF
EENSFAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMTEEQKKYYNAMKK
LGTKKPQKPIPRPLNKCQAFVFDLVTSQVFDIIILGLIVLNMIIMMAESEGQDQQVKKIF
DILNIAFVAIFTVECLIKIFALRQYYFTNGWNLFDCVVVVLSIISTLVSGLENSDIPFPP
TLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNCF
SKVERGSGIDDIFNFETFSGSMLCLFQVTTSAGWDALLGPMLVSKGSNSSQDCQQPRIAI
IYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFDIFYEIWEKFDPEATQFI
QYSALSDFADALPEPLRVAKPNKFQFLLMDLPMVMGDRLHCMDVLFAFTTRVLGNSSGLD
TMKAMMEEKFMEANPFRKLYEPIVTTTKRKEEELCAAVIQRAYRKHMQKVVRLKLQDRSS
PSHQKLCNGDLSSLDMAKVKVHYD
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggtactacccggtgatcttcccagatgagaggaatttccgccccttcacc
tctgactccctggctgccatagagaagcgcatcgccatcaagaaggagaagaagaagaac
aaagacacgacagcggctgagccccagcctcggcctcagcttgacctcaaggcctccagg
aagctacctaagctttacggcgacattcctcatgatctgatcgcaaagcccctggaagac
ctggacccgttctacagagaccataagacattcatggtgttgaacaagaagaggacgata
tatcgcttcagtgccaagcgggccttgttcattctggggcctttcaaccctgtcagaagc
ttagtgattcggatttctgtccattcactcttcagtgtgtttatcatctgcacggtggtc
gtcaactgtatgttcatggccaattttggggacagaatttcagacatggaaatttctgaa
tacatcttcactgggatttacattttagaggctgtgattaaaatattggcaagaggtttc
atcctggatgagttttccttcctccgagacccgtggaactggctggatttcattgtcatt
ggaacagcgatcgcaacttgttttccaggtaccaaagtcaatctatcagctctccgtacc
ttccgagtgttcagagctctgaaagcaatttctgtcgtctcaggtctgaaggttatcgtc
ggggccctgctgcgctctgtgaagaagctggtggatgtcatgatcctcacgctcttctgc
ctcagcatctttgcgctggttgggcagcagctcttcatggggattctgaaccagaaatgt
gtcaagaccaactgtggccctaaccctacgtccaacatggactgctttgtaaagcaaaac
aatagtgacgacttcgtcatgtgtggcacctggttcggcagcagctcctgtcccaatgat
tctacatgcaacaaaacctcatttaacccagactataactacacgaactttgacaacttc
ggctggtcttttctcgccatgttccgggttatgactcaagactcttgggagaagctgtac
cgacagatccttcggacctctggcatctacttcgtcttcttctttgtggtggtcatcttc
ctgggttctttctacctgctcaacttaaccctggctgttgtcaccatggcgtatgaagag
cagaacaggaatgtggctgcagagacagaggccaaggaaaagatgtttcaagaagcccag
cagctgttaagggaggagaaagaggctctggttgccatggggattgacagaagttcgctt
aattcccttcaagcatcgtccttttccccaaagaagaaaaggttttttagtagtaagaca
agaaagtccttctttatgagagggtctaagagggaccgggcctcgtcggagtcgaaggat
gattcagctaaaaacccacaactccttgagcaaaccaaacgactgtcccagaacttgccc
gtggacctctttgatgagcacatggaccccttccaccggcagagggcgctgagtgccgtc
agcatcttgaccatcaccatgcaggaacaagaaaaatcccaggaaccttgtctcccatgt
gggaaaaacttggcatccaagtacctggtgtgggactgtagccctcagtggctgtgcgtc
aagaagatcctgcggaccgtgatgaccgaccccttcactgagcttgctatcaccatctgc
atcattgtcaataccgtcttcctggccatggagcatcacgacatggatgacacgtttata
aatctactaaaaataggaaactgggttttcactggaattttcgtagcggaaatgtgtcta
aagatcatcgcgctggacccgtaccactacttccgccacggctggaacgtcttcgacagc
atcgtcgcccttctgagtcttgctgacgtcctttacaccaacctgtctgataagagcagc
cgctcgaatcgctccttcttggcttccttcagggtgctgagggtcttcaagttggccaaa
tcctggcccactttaaacactctcattaagatcatcggccactccgtgggtgctcttgga
aacctgaccgtggtcctgaccattgtggtcttcattttctccgtggttggcatgcagctt
ttcggcaccaagttcaacaagaccgtctctaccggccaggagcagcgcacgcggcgctgg
cacatgggcgatttctatcactccttcctggtggtgttccgcatcctctgcggggagtgg
atcgagaacatgtgggaatgcatgcagggtatggacggctctccgctgtgcgtcattgtc
ttcgtgctgatcatggtggtgggaaagctcgtggtgcttaacctcttcattgccttgctg
ctcaattccttcagcaatgaggagagggatgggcaacccgaaggagagaccaggaaaacc
aaagtgcagctggctctgaagaggttccgccgggccttttccttcatggggcgcgctctt
cagaatttctgttgtaagagatgtcggaggcaaaactcaccgaagccaaaagagatccca
gggagttttgatagtgagagtaaagacagtattcccctggatacaaagccctggaaggaa
tttgatgcacaaatgattttggactctgggcacggcaggcctcgcttggccccacttgca
gaggaagaggatgactttgaatgctttgatgaattcagagcctcacgcatctcccaagct
ggtgctgaagttcagacctgtgacgtccctctggagaccaagcagcctaccagcccagat
gaccaaggtgtggaccctgaagtgttctctgaagaagatccgcatctggccatacagagt
gctcggaagaagtctgacgcggcaagcgtgctctcagaatgcagcaccattgatctgaat
agcttcataaatttccgaaacatggatacgcccaaaaagcaaccggatagatgcttaccc
aaaagcctcggttgccattttctgtgccacaagagaaacaagagaaagccctgctgggtt
gtgtggtggaatcttcggaaaacctgctaccagatcgtgaagcacagctggttcgaaagc
tttatcatctttgtcatcctgctgagcagcggcgctctgatatttgaagacatcaacatc
tcttcacggccccatatcgagagattgctaaggtgtaccgataatatcttcacatttatt
tttatcctggagatgattctaaagtgggtggccttcggattccggaggtatttcaccagc
gcctggtgctggctcgatttcctcattgtaatcgtgtctgtggtcagtctcacgaattca
ccaagcctgaagtccttccggaccctgcgggccctgaggcccctgcgggcgctgtctcag
tttgaaggaatgaaggttgtggtcaacgccctcatcagcgccatacccgccattctcaac
gtcctgctggtctgcctcattttctggctcatattttgcatcctgggagtaaattttttt
tccgggaggtttggaaggtgcattaacgggacagacatcaataaatacctcaatcatact
gaaattcaaaaccgaagccagtgtaaagatagcaatttctcctgggaggtcccgaaagtc
aactttgacaacgtggggaatgcctacctcgctctgctgcaggtggcaacgtataagggc
tggctggacattatgaacgctgctgtggactccagagggaaagatgagcagccgggcttt
gaggagaacagctttgcttatctttacttcgtggtctttatcatctttggctcattcttc
accctgaacctctttatcggcgttattatcgacaacttcaatcagcagcagaaaaagata
agtggccaagacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaag
ttaggaaccaaaaaacctcaaaaacccatcccaagaccactgaacaaatgtcaagccttt
gtgttcgacctggtcacaagccaggtctttgacatcatcattctgggtcttattgtccta
aatatgattatcatgatggctgaatctgaaggccaggaccagcaagtgaagaaaatcttt
gatattctcaacatagcctttgtggccatctttaccgtagagtgtctcatcaaaatcttt
gctttgaggcaatactacttcaccaatggctggaatttatttgattgtgtggtcgtggtt
ctttctattattagtaccctggtttctggcttggagaacagcgacattcctttcccaccc
acgctcttcagaatcgtccgcttggcgcggattggccgaatcctccgactggttcgggcg
gcgcgcggcatcaggacgctcctctttgctctgatgatgtctctcccctctctcttcaac
atcggtctgctgctctttctggtcatgttcatttacgccatcttcgggatgaactgtttc
tccaaagtggagaggggctccgggatcgacgacatcttcaactttgaaacgttttcgggc
agcatgctctgtctcttccaggtgaccacttccgctggctgggatgccctcctcggcccc
atgctggtttcaaaaggctccaactcctcccaagactgccagcagccacggatagccata
atttatttcgtcagttacatcatcatctccttcctcatcgtggtcaacatgtacatcgcc
gtgatcctggagaacttcaatacggccacggaggaaagcgaggatcctctgggtgaagat
gactttgatatcttctatgagatctgggagaagtttgacccagaagcaacccagttcatc
cagtactcggccctctctgactttgccgacgccctgccggagccgttacgggtggccaag
cctaacaagtttcagtttctactgatggacttgcccatggtgatgggcgatcggctccac
tgcatggacgttctctttgccttcaccactcgggtcctcgggaactccagtggcttagat
accatgaaagcaatgatggaggagaagtttatggaggccaaccctttcagaaagttgtat
gagcccatcgtcaccaccaccaagaggaaggaggaggagctgtgtgctgccgtcatccaa
agggcttaccgaaaacacatgcagaaggtggtcaggttgaagctgcaagacaggtcaagc
ccatcccaccaaaaattgtgtaacggagacttgtctagcttggatatggccaaggtcaag
gttcactatgactga
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integrated database retrieval system
